Ontology meeting 2021-06-21

• Group members: Pascale, Karen, Harold, Raymond, Peter, Jim, Tanya, Kimberly, David, Chris, Paul
• Present:
• Regrets:

Agenda

Announcements

• Rhea-GO alignment jamboree- week of July 26th

Discussion points

ATPase jamboree update

https://github.com/orgs/geneontology/projects/64

Ontology intersection question

https://github.com/geneontology/go-ontology/issues/21634 This is about 'x regions' - cytosolic region, cytoplasmic region, etc. Decision was to add 'DO NOT ANNOTATE' flag on these terms.

Carried over discussion topics from previous meetings

Secondary metabolism

• Do we need to create the 'metabolism/catabolism/biosynthesis triad?
• See https://github.com/geneontology/go-ontology/issues/21496 & related tickets by Ach
• In many cases we dont have evidence for a specific degradation pathway
  • Discussion: agreed that we should not always create the triad, on a case-by-case basis.
  • Action: to document

Other Business

https://github.com/geneontology/go-ontology/projects/1