Projects stand up meeting 2021-06-30
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Attendees
- Present: David, Kimberly, Pascale, Seth, Suzi, Paul + Tanya
- Regrets: Chris
- Managers: David, Huaiyu, Kimberly, Pascale, Seth, Suzi, Paul, Chris
Announcements
GOC meeting dates: Oct 13-15 (Wed to Friday) - Announcement was emailed to go-consortium 2 weeks ago
Discussion points
Taxon constraints not filtering errors: https://github.com/geneontology/go-ontology/issues/21642 What is the priority on this?
-> Likely fixed, Pascale needs to check snapshot
TAIR - data load question
- To be discussed in the second part of the call
- Title: Multi-omics network-based functional annotation of unknown Arabidopsis genes (link to draft manuscript here - please keep confidential) "we developed a novel automated function prediction (AFP) algorithm(...) Next, we predicted biological process annotations for known and unknown genes in A. thaliana and validated our predictions using experimental protein-DNA and protein-protein interaction data (...)
Ongoing projects
Urgent bug
NEO - not loading all MGI entities: https://github.com/geneontology/neo/issues/70 Jim needed to help fix this
MOD imports
Kimberly and David described tasks - not all tickets are assigned yet; need Jim and probably Sierra
Topics reported to next week
Ontology
- ATPase jamboree
- Next: GO-Rhea alignment - week of July 26
- Participants:
GAF2.2 Migration
- Can we close this project?
- Are all GO upstreams in compliance?
- https://github.com/orgs/geneontology/projects/51
Priorities
- GPAD project
- NEO
GOC meeting Action Points
- Are any of these items high priority?