Projects update meeting 2022-02-02

From GO Wiki
Jump to navigation Jump to search


  • Present: David, Kimberly, Pascale, Suzi, Seth, Cynthia, Chris
  • Regrets: Paul
  • Managers: David, Huaiyu, Kimberly, Pascale, Seth, Suzi, Paul, Chris, Cynthia

Doodle for Next GOC meeting

Any blocking issues on ongoing projects?

  • Waiting on GPAD files from Alex for WB and SGD imports from Protein2GO

Noctua Training

  • ZFIN and MGI are interested in a Noctua training session
  • D and K are thinking early March
  • Would be good to formalize our Noctua training and have a 'syllabus' and related docs available
  • This will require some short-term effort, though


David, Kimberly, Pascale: 3 main picks:

  1. Who ? Automation of updates in Noctua - Kimberly's 3a point in 2022 Priorities
    • Establish & implement SOPs for data maintenance in Noctua and user notification of changes/checks
    • Automatic updates wherever possible
    • For example, obsolete and replaced by ontology terms for all ontologies used
    • If no ‘replaced by’, automatic updates if this reflects a consensus change in ontology term used, e.g. directly positively regulates -> positively regulates
  2. David, Kimberly: Annotation output from Noctua -> for reconsumption by MODs and any other user
    • How far off are we from the target?
    • Need to categorize the issues: bad data, missing data, redundancy etc
  3. Tremayne + Jim: Model copy
  4. David, Kimberly (+Pascale, Suzi): Review/update Noctua training materials

Clean up GH repos