Projects update meeting 2023-10-25

From GO Wiki
Jump to navigation Jump to search

Attendees

  • Members: David, Jim, Kimberly, Pascale, Seth, Suzi, Huaiyu, Paul, Chris, Cynthia
  • Present:
  • Regrets:


Prepare for SAB meeting

Nov 7, 2023

Release schedule

(Pascale)

  • so far in 2023:
    • 7 releases (should have had 10)
    • 13 attempts
      • 6 failures due to internal problems
      • 4 failures due to external problems
  • Can we improve?
    • internal issues: working to improve pipeline; performance issues slow down turn around time
    • external issues: we've been giving a week (or more) for groups to fix any issues. Should we be more aggressive and directly load the previous 'passing' file, and let groups fix their issues for the next release?


  • 2023-01-01 >> OK
  • (missed Feb)
  • 2023-03-06 >> acceptable
    • 2 attempts
      • external delay due to bad file header EcoCyc (new source)
  • 2023-04-01 >> OK
  • 2023-05-10
    • internal delay (single attempt)
  • 2023-06-11
    • internal delay (single attempt)
  • 2023-07-27
    • 2 attempts
      • internal delay until first attempt 07-21
      • external: lost all dicty annotation, problem with GOA source file (empty)
  • (skipped Aug since July release was very late)
  • skipped September: 2 failed attempts
    • 2023-09-10
      • external: problem with WB references
    • 2023-09-25
      • internal?/external? (PAINT pipeline): GAF/GPI issue with pombase identifiers, lost 1000 IBAs (12% of total annotations)
  • 2023-10-09 (came out on the 15th or so)
    • internal delay (single attempt)

Main points and AI from Fall 2023 GOC meeting

https://docs.google.com/document/d/15ePOkbY4whF5kQIabieFD5JfxfHdclUqoHcyykmqzK0/edit