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2024-03-19T02:37:29Z
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https://wiki.geneontology.org/index.php?title=MENGO_Oligosaccharide_transport&diff=37621
MENGO Oligosaccharide transport
2011-10-24T14:10:04Z
<p>Epurwant: </p>
<hr />
<div>Working Group Members<br />
*<br />
*<br />
*<br />
==Endang_07/07/2011==<br />
<br />
===Disaccharide transport (GO 0015766)===<br />
<br />
namespace: biological process<br />
<br />
def: The directed movement of disaccharides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Disaccharides are sugars composed of two monosaccharide units.<br />
<br />
<br />
====GO:XXXXXX101 : Laminaribiose transport activity====<br />
<br />
namespace: biological process<br />
<br />
def: The directed movement of laminaribiose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Laminaribiose is a sugars consisting of two glucose molecules linked via beta-1,3 glycosidic bonds.<br />
<br />
part_of: GO:0015766 : disaccharide transport<br />
<br />
PMID : 11489849, 16461685, 18952792 <br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX102 : Sophorose transport activity====<br />
<br />
namespace: biological process<br />
<br />
def: The directed movement of sophorose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Sophorose is a sugars consisting of two glucose molecules (2-O-beta-D-Glucopyranosyl-alpha-D-glucose)<br />
<br />
part_of: GO:0015766 : disaccharide transport<br />
<br />
PMID : 11489849<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
===GO:XXXXXX103 : Trisaccharide transport===<br />
<br />
namespace: biological process<br />
<br />
def: The directed movement of trisaccharides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Trisaccharides are sugars composed of three monosaccharide units.<br />
<br />
part_of: GO:0015772: Oligosaccharide transport<br />
<br />
PMID : 18203856, 6754547, 8407799, 9529885<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX104 : maltotriose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of maltotriose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Maltotriose is a trisaccharide (three-part sugar) consisting of three maltose molecules linked with α-1,4 glycosidic bonds. It is most commonly produced by the enzyme alpha amylase on amylose in starch.<br />
<br />
part_of: GO:XXXXXX103 : Trisaccharide transport<br />
<br />
PMID : 8055920, 10971593<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
<br />
====GO:XXXXXX105 : maltotriulose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of maltotriose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Maltotriulose is a trisaccharide (three-part sugar) consisting of glucose, α(1→4), glucose, α(1→4), fructose.<br />
<br />
part_of: GO:XXXXXX103 : Trisaccharide transport<br />
<br />
PMID : 5690932, <br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX106 : Nigerotriose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of nigerotriose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Nigerotriose is a trisaccharide (three-part sugar) consisting of glucose with α(1→3) linkages.<br />
<br />
part_of: GO:XXXXXX103 : Trisaccharide transport<br />
<br />
PMID : 17496125<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX107 : Arabinotriose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of arabinotriose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Arabinotriose is a trisaccharide (three-part sugar) consisting of arabinose via alpha-1,5 linkages.<br />
<br />
part_of: GO:XXXXXX103 : Trisaccharide transport<br />
<br />
PMID : 20693325<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX108 : Galactotriose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of galactotriose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Galactotriose is a trisaccharide (three-part sugar) consisting of galactose β-(1→3)or β-(1→4), or β(1,6) linkages.<br />
<br />
part_of: GO:XXXXXX103 : Trisaccharide transport<br />
<br />
PMID : 17644603<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX109 : Xylotriose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of xylotriose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Xylotriose is a trisaccharide (three-part sugar) consisting of Xylose via 1,4-β-D linkages.<br />
<br />
part_of: GO:XXXXXX103 : Trisaccharide transport<br />
<br />
PMID : 17142383, 16461685<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX110 : Mannotriose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of mannotriose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Mannotriose is a trisaccharide (three-part sugar) consisting of mannose via beta-(1,4) linkages.<br />
<br />
part_of: GO:XXXXXX103 : Trisaccharide transport<br />
<br />
PMID : 16461685<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX111 : Cellotriose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of cellotriose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Cellotriose is a trisaccharide (three-part sugar) consisting of glucose via beta-(1,4) linkages.<br />
<br />
part_of: GO:XXXXXX103 : Trisaccharide transport<br />
<br />
PMID : 8973652, 10347054, 10981702, <br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX112 : Laminaritriose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of laminaritriose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Laminaritriose is a sugars consisting of three glucose molecules linked with beta-1,3 glycosidic bonds.<br />
<br />
part_of: GO:XXXXXX113 : Trisaccharide transport<br />
<br />
PMID : 11489849<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
===GO:XXXXXX113 : Tetrasaccharide transport===<br />
<br />
namespace: biological process<br />
<br />
def: The directed movement of tetrasaccharides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Tetrasaccharides are sugars composed of four monosaccharide units.<br />
<br />
part_of: GO:0015772 : Oligosaccharide transport<br />
<br />
PMID : 16461685, 17965163, 9529885 <br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX114 : maltotetraose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of maltotetraose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Maltotetraose is a tetrasaccharide (four-part sugar) consisting of three maltose molecules linked with α-1,4 glycosidic linkages. <br />
<br />
part_of: GO:XXXXXX113 : Tetrasaccharide transport<br />
<br />
PMID : 9211909, 16321936, 17965163. <br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX115 : Arabinotetraose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of arabinotetraose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Arabinotetraose is a tetrasaccharide (four-part sugar) consisting of arabinose via alpha-1,5 linkages.<br />
<br />
part_of: GO:XXXXXX113 : Tetrasaccharide transport<br />
<br />
PMID : 20693325<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX116 : Galactotetraose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of galactotetraose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Galactotetraose is a tetrasaccharide (four-part sugar) consisting of galactose via β-(1→3)or β-(1→4), or β(1,6) linkages.<br />
<br />
part_of: GO:XXXXXX113 : Tetrasaccharide transport<br />
<br />
PMID : 17644603<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX117 : Xylotetraose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of xylotetraose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Xylotetraose is a tetrasaccharide (four-part sugar) consisting of Xylose via 1,4-β-D linkages.<br />
<br />
part_of: GO:XXXXXX113 : Tetrasaccharide transport<br />
<br />
PMID : 17142383<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX118 : Mannotetraose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of mannotetraose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Mannotetraose is a tetrasaccharide (four-part sugar) consisting of mannose via beta-(1,4) linkages.<br />
<br />
part_of: GO:XXXXXX113 : Tetrasaccharide transport<br />
<br />
PMID : 16461685<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX119 : Cellotetraose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of cellotetraose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Cellotetraose is a tetrasaccharide (four-part sugar) consisting of glucose via beta-(1,4) linkages.<br />
<br />
part_of: GO:XXXXXX113 : Tetrasaccharide transport<br />
<br />
PMID : 11489849<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
===GO:XXXXXX120 : Pentasaccharide transport===<br />
<br />
namespace: biological process<br />
<br />
def: The directed movement of pentasaccharides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Pentasaccharides are sugars composed of five monosaccharide units.<br />
<br />
part_of: GO:0015772 : Oligosaccharide transport<br />
<br />
PMID : 12749343, 12700069, <br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX121 : Maltopentaose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of maltopentaose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Maltopentaose is a pentasaccharide (five-part sugar) consisting of three maltose molecules linked with α-1,4 glycosidic linkages. <br />
<br />
part_of: GO:XXXXXX120 : Pentasaccharide transport<br />
<br />
PMID : 12700069, 16321934<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX122 : Galactopentaose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of galactopentaose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Galactopentaose is a pentasaccharide (five-part sugar) consisting of galactose via β-(1→3)or β-(1→4), or β(1,6) linkages.<br />
<br />
part_of: GO:XXXXXX120 : Pentasaccharide transport<br />
<br />
PMID : 17644603<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX123 : Cellopentaose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of cellopentaose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Cellopentaose is a pentasaccharide (Five-part sugar) consisting of glucose via beta-(1,4) linkages.<br />
<br />
part_of: GO:XXXXXX120 : Pentasaccharide transport<br />
<br />
PMID : 11489849<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
<br />
===GO:XXXXXX124 : Hexasaccharide transport===<br />
<br />
namespace: biological process<br />
<br />
def: The directed movement of hexasaccharides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Hexasaccharides are sugars composed of six monosaccharide units.<br />
<br />
part_of: GO:0015772 : Oligosaccharide transport<br />
<br />
PMID : 8805519, 9573146, 12003940, 17644603<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX125 : Maltohexaose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of maltohexaose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Maltohexaose is a hexasaccharide (six-part sugar) consisting of six maltose molecules joined with α-1,4 glycosidic linkages. <br />
<br />
part_of: GO:XXXXXX124 : Hexasaccharide transport<br />
<br />
PMID : 8805519, 9573146, 12003940, 11806922 <br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX126 : Galactohexaose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of galactohexaose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Galactohexaose is a hexasaccharide (six-part sugar) consisting of galactose via β-(1→3)or β-(1→4), or β(1,6) linkages.<br />
<br />
part_of: GO:XXXXXX124 : Hexasaccharide transport<br />
<br />
PMID : 17644603<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
===GO:XXXXXX127 : Heptasaccharide transport===<br />
<br />
namespace: biological process<br />
<br />
def: The directed movement of heptasaccharides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Heptasaccharides are sugars composed of seven monosaccharide units.<br />
<br />
part_of: GO:0015772 : Oligosaccharide transport<br />
<br />
PMID : <br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX128 : Maltoheptaose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of maltoheptaose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Maltoheptaose is a heptasaccharide (seven-part sugar) consisting of seven maltose molecules joined by α-1,4 glycosidic linkages. <br />
<br />
part_of: GO:XXXXXX127 : Heptasaccharide transport<br />
<br />
PMID : 11806922<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]</div>
Epurwant
https://wiki.geneontology.org/index.php?title=MENGO_Oligosaccharide_transport&diff=37619
MENGO Oligosaccharide transport
2011-10-24T13:38:28Z
<p>Epurwant: </p>
<hr />
<div>Working Group Members<br />
*<br />
*<br />
*<br />
==Endang_07/07/2011==<br />
<br />
===Disaccharide transport (GO 0015766)===<br />
<br />
namespace: biological process<br />
<br />
def: The directed movement of disaccharides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Disaccharides are sugars composed of two monosaccharide units.<br />
<br />
<br />
====GO:XXXXXX101 : Laminaribiose transport activity====<br />
<br />
namespace: biological process<br />
<br />
def: The directed movement of laminaribiose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Laminaribiose is a sugars consisting of two glucose molecules linked via beta-1,3 glycosidic bonds.<br />
<br />
part_of: GO:0015766 : disaccharide transport<br />
<br />
PMID : 11489849, 16461685, 18952792 <br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX102 : Sophorose transport activity====<br />
<br />
namespace: biological process<br />
<br />
def: The directed movement of sophorose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Sophorose is a sugars consisting of two glucose molecules (2-O-beta-D-Glucopyranosyl-alpha-D-glucose)<br />
<br />
part_of: GO:0015766 : disaccharide transport<br />
<br />
PMID : 11489849<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
===GO:XXXXXX103 : Trisaccharide transport===<br />
<br />
namespace: biological process<br />
<br />
def: The directed movement of trisaccharides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Trisaccharides are sugars composed of three monosaccharide units.<br />
<br />
part_of: GO:0015772: Oligosaccharide transport<br />
<br />
PMID : 18203856, 6754547, 8407799, 9529885<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX104 : maltotriose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of maltotriose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Maltotriose is a trisaccharide (three-part sugar) consisting of three maltose molecules linked with α-1,4 glycosidic bonds. It is most commonly produced by the enzyme alpha amylase on amylose in starch.<br />
<br />
part_of: GO:XXXXXX103 : Trisaccharide transport<br />
<br />
PMID : 8055920, 10971593<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
<br />
====GO:XXXXXX105 : maltotriulose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of maltotriose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Maltotriulose is a trisaccharide (three-part sugar) consisting of glucose, α(1→4), glucose, α(1→4), fructose.<br />
<br />
part_of: GO:XXXXXX103 : Trisaccharide transport<br />
<br />
PMID : 5690932, <br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX106 : Nigerotriose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of nigerotriose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Nigerotriose is a trisaccharide (three-part sugar) consisting of glucose with α(1→3) linkages.<br />
<br />
part_of: GO:XXXXXX103 : Trisaccharide transport<br />
<br />
PMID : 17496125<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX107 : Arabinotriose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of arabinotriose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Arabinotriose is a trisaccharide (three-part sugar) consisting of arabinose via alpha-1,5 linkages.<br />
<br />
part_of: GO:XXXXXX103 : Trisaccharide transport<br />
<br />
PMID : 20693325<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX108 : Galactotriose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of galactotriose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Galactotriose is a trisaccharide (three-part sugar) consisting of galactose via α-(1→3)-β-(1→4) linkages.<br />
<br />
part_of: GO:XXXXXX103 : Trisaccharide transport<br />
<br />
PMID : 17644603<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX109 : Xylotriose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of xylotriose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Xylotriose is a trisaccharide (three-part sugar) consisting of Xylose via 1,4-β-D linkages.<br />
<br />
part_of: GO:XXXXXX103 : Trisaccharide transport<br />
<br />
PMID : 17142383, 16461685<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX110 : Mannotriose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of mannotriose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Mannotriose is a trisaccharide (three-part sugar) consisting of mannose via beta-(1,4) linkages.<br />
<br />
part_of: GO:XXXXXX103 : Trisaccharide transport<br />
<br />
PMID : 16461685<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX111 : Cellotriose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of cellotriose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Cellotriose is a trisaccharide (three-part sugar) consisting of glucose via beta-(1,4) linkages.<br />
<br />
part_of: GO:XXXXXX103 : Trisaccharide transport<br />
<br />
PMID : 8973652, 10347054, 10981702, <br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX112 : Laminaritriose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of laminaritriose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Laminaritriose is a sugars consisting of three glucose molecules linked with beta-1,3 glycosidic bonds.<br />
<br />
part_of: GO:XXXXXX113 : Trisaccharide transport<br />
<br />
PMID : 11489849<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
===GO:XXXXXX113 : Tetrasaccharide transport===<br />
<br />
namespace: biological process<br />
<br />
def: The directed movement of tetrasaccharides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Tetrasaccharides are sugars composed of four monosaccharide units.<br />
<br />
part_of: GO:0015772 : Oligosaccharide transport<br />
<br />
PMID : 16461685, 17965163, 9529885 <br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX114 : maltotetraose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of maltotetraose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Maltotetraose is a tetrasaccharide (four-part sugar) consisting of three maltose molecules linked with α-1,4 glycosidic linkages. <br />
<br />
part_of: GO:XXXXXX113 : Tetrasaccharide transport<br />
<br />
PMID : 9211909, 16321936, 17965163. <br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX115 : Arabinotetraose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of arabinotetraose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Arabinotetraose is a tetrasaccharide (four-part sugar) consisting of arabinose via alpha-1,5 linkages.<br />
<br />
part_of: GO:XXXXXX113 : Tetrasaccharide transport<br />
<br />
PMID : 20693325<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX116 : Galactotetraose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of galactotetraose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Galactotetraose is a tetrasaccharide (four-part sugar) consisting of galactose via α-(1→3)-β-(1→4) linkages.<br />
<br />
part_of: GO:XXXXXX113 : Tetrasaccharide transport<br />
<br />
PMID : 17644603<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX117 : Xylotetraose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of xylotetraose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Xylotetraose is a tetrasaccharide (four-part sugar) consisting of Xylose via 1,4-β-D linkages.<br />
<br />
part_of: GO:XXXXXX113 : Tetrasaccharide transport<br />
<br />
PMID : 17142383<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX118 : Mannotetraose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of mannotetraose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Mannotetraose is a tetrasaccharide (four-part sugar) consisting of mannose via beta-(1,4) linkages.<br />
<br />
part_of: GO:XXXXXX113 : Tetrasaccharide transport<br />
<br />
PMID : 16461685<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX119 : Cellotetraose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of cellotetraose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Cellotetraose is a tetrasaccharide (four-part sugar) consisting of glucose via beta-(1,4) linkages.<br />
<br />
part_of: GO:XXXXXX113 : Tetrasaccharide transport<br />
<br />
PMID : 11489849<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
===GO:XXXXXX120 : Pentasaccharide transport===<br />
<br />
namespace: biological process<br />
<br />
def: The directed movement of pentasaccharides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Pentasaccharides are sugars composed of five monosaccharide units.<br />
<br />
part_of: GO:0015772 : Oligosaccharide transport<br />
<br />
PMID : 12749343, 12700069, <br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX121 : Maltopentaose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of maltopentaose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Maltopentaose is a pentasaccharide (five-part sugar) consisting of three maltose molecules linked with α-1,4 glycosidic linkages. <br />
<br />
part_of: GO:XXXXXX120 : Pentasaccharide transport<br />
<br />
PMID : 12700069, 16321934<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX122 : Galactopentaose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of galactopentaose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Galactopentaose is a pentasaccharide (five-part sugar) consisting of galactose via β-(1→3)or β-(1→4), or β(1,6) linkages.<br />
<br />
part_of: GO:XXXXXX120 : Pentasaccharide transport<br />
<br />
PMID : 17644603<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX123 : Cellopentaose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of cellopentaose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Cellopentaose is a pentasaccharide (Five-part sugar) consisting of glucose via beta-(1,4) linkages.<br />
<br />
part_of: GO:XXXXXX120 : Pentasaccharide transport<br />
<br />
PMID : 11489849<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
<br />
===GO:XXXXXX124 : Hexasaccharide transport===<br />
<br />
namespace: biological process<br />
<br />
def: The directed movement of hexasaccharides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Hexasaccharides are sugars composed of six monosaccharide units.<br />
<br />
part_of: GO:0015772 : Oligosaccharide transport<br />
<br />
PMID : 8805519, 9573146, 12003940, 17644603<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX125 : Maltohexaose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of maltohexaose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Maltohexaose is a hexasaccharide (six-part sugar) consisting of six maltose molecules joined with α-1,4 glycosidic linkages. <br />
<br />
part_of: GO:XXXXXX124 : Hexasaccharide transport<br />
<br />
PMID : 8805519, 9573146, 12003940, 11806922 <br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX126 : Galactohexaose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of galactohexaose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Galactohexaose is a hexasaccharide (six-part sugar) consisting of galactose via β-(1→3)or β-(1→4), or β(1,6) linkages.<br />
<br />
part_of: GO:XXXXXX124 : Hexasaccharide transport<br />
<br />
PMID : 17644603<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
===GO:XXXXXX127 : Heptasaccharide transport===<br />
<br />
namespace: biological process<br />
<br />
def: The directed movement of heptasaccharides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Heptasaccharides are sugars composed of seven monosaccharide units.<br />
<br />
part_of: GO:0015772 : Oligosaccharide transport<br />
<br />
PMID : <br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX128 : Maltoheptaose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of maltoheptaose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Maltoheptaose is a heptasaccharide (seven-part sugar) consisting of seven maltose molecules joined by α-1,4 glycosidic linkages. <br />
<br />
part_of: GO:XXXXXX127 : Heptasaccharide transport<br />
<br />
PMID : 11806922<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]</div>
Epurwant
https://wiki.geneontology.org/index.php?title=MENGO_Oligosaccharide_transport&diff=37618
MENGO Oligosaccharide transport
2011-10-24T13:35:10Z
<p>Epurwant: </p>
<hr />
<div>Working Group Members<br />
*<br />
*<br />
*<br />
==Endang_07/07/2011==<br />
<br />
===Disaccharide transport (GO 0015766)===<br />
<br />
namespace: biological process<br />
<br />
def: The directed movement of disaccharides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Disaccharides are sugars composed of two monosaccharide units.<br />
<br />
<br />
====GO:XXXXXX101 : Laminaribiose transport activity====<br />
<br />
namespace: biological process<br />
<br />
def: The directed movement of laminaribiose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Laminaribiose is a sugars consisting of two glucose molecules linked via beta-1,3 glycosidic bonds.<br />
<br />
part_of: GO:0015766 : disaccharide transport<br />
<br />
PMID : 11489849, 16461685, 18952792 <br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX102 : Sophorose transport activity====<br />
<br />
namespace: biological process<br />
<br />
def: The directed movement of sophorose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Sophorose is a sugars consisting of two glucose molecules (2-O-beta-D-Glucopyranosyl-alpha-D-glucose)<br />
<br />
part_of: GO:0015766 : disaccharide transport<br />
<br />
PMID : 11489849<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
===GO:XXXXXX103 : Trisaccharide transport===<br />
<br />
namespace: biological process<br />
<br />
def: The directed movement of trisaccharides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Trisaccharides are sugars composed of three monosaccharide units.<br />
<br />
part_of: GO:0015772: Oligosaccharide transport<br />
<br />
PMID : 18203856, 6754547, 8407799, 9529885<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX104 : maltotriose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of maltotriose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Maltotriose is a trisaccharide (three-part sugar) consisting of three maltose molecules linked with α-1,4 glycosidic bonds. It is most commonly produced by the enzyme alpha amylase on amylose in starch.<br />
<br />
part_of: GO:XXXXXX103 : Trisaccharide transport<br />
<br />
PMID : 8055920, 10971593<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
<br />
====GO:XXXXXX105 : maltotriulose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of maltotriose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Maltotriulose is a trisaccharide (three-part sugar) consisting of glucose, α(1→4), glucose, α(1→4), fructose.<br />
<br />
part_of: GO:XXXXXX103 : Trisaccharide transport<br />
<br />
PMID : 5690932, <br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX106 : Nigerotriose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of nigerotriose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Nigerotriose is a trisaccharide (three-part sugar) consisting of glucose with α(1→3) linkages.<br />
<br />
part_of: GO:XXXXXX103 : Trisaccharide transport<br />
<br />
PMID : 17496125<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX107 : Arabinotriose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of arabinotriose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Arabinotriose is a trisaccharide (three-part sugar) consisting of arabinose via alpha-1,5 linkages.<br />
<br />
part_of: GO:XXXXXX103 : Trisaccharide transport<br />
<br />
PMID : 20693325<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX108 : Galactotriose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of galactotriose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Galactotriose is a trisaccharide (three-part sugar) consisting of galactose via α-(1→3)-β-(1→4) linkages.<br />
<br />
part_of: GO:XXXXXX103 : Trisaccharide transport<br />
<br />
PMID : 17644603<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX109 : Xylotriose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of xylotriose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Xylotriose is a trisaccharide (three-part sugar) consisting of Xylose via 1,4-β-D linkages.<br />
<br />
part_of: GO:XXXXXX103 : Trisaccharide transport<br />
<br />
PMID : 17142383, 16461685<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX110 : Mannotriose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of mannotriose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Mannotriose is a trisaccharide (three-part sugar) consisting of mannose via beta-(1,4) linkages.<br />
<br />
part_of: GO:XXXXXX103 : Trisaccharide transport<br />
<br />
PMID : 16461685<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX111 : Cellotriose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of cellotriose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Cellotriose is a trisaccharide (three-part sugar) consisting of glucose via beta-(1,4) linkages.<br />
<br />
part_of: GO:XXXXXX103 : Trisaccharide transport<br />
<br />
PMID : 8973652, 10347054, 10981702, <br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX112 : Laminaritriose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of laminaritriose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Laminaritriose is a sugars consisting of three glucose molecules linked with beta-1,3 glycosidic bonds.<br />
<br />
part_of: GO:XXXXXX113 : Trisaccharide transport<br />
<br />
PMID : 11489849<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
===GO:XXXXXX113 : Tetrasaccharide transport===<br />
<br />
namespace: biological process<br />
<br />
def: The directed movement of tetrasaccharides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Tetrasaccharides are sugars composed of four monosaccharide units.<br />
<br />
part_of: GO:0015772 : Oligosaccharide transport<br />
<br />
PMID : 16461685, 17965163, 9529885 <br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX114 : maltotetraose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of maltotetraose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Maltotetraose is a tetrasaccharide (four-part sugar) consisting of three maltose molecules linked with α-1,4 glycosidic linkages. <br />
<br />
part_of: GO:XXXXXX113 : Tetrasaccharide transport<br />
<br />
PMID : 9211909, 16321936, 17965163. <br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX115 : Arabinotetraose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of arabinotetraose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Arabinotetraose is a tetrasaccharide (four-part sugar) consisting of arabinose via alpha-1,5 linkages.<br />
<br />
part_of: GO:XXXXXX113 : Tetrasaccharide transport<br />
<br />
PMID : 20693325<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX116 : Galactotetraose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of galactotetraose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Galactotetraose is a tetrasaccharide (four-part sugar) consisting of galactose via α-(1→3)-β-(1→4) linkages.<br />
<br />
part_of: GO:XXXXXX113 : Tetrasaccharide transport<br />
<br />
PMID : 17644603<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX117 : Xylotetraose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of xylotetraose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Xylotetraose is a tetrasaccharide (four-part sugar) consisting of Xylose via 1,4-β-D linkages.<br />
<br />
part_of: GO:XXXXXX113 : Tetrasaccharide transport<br />
<br />
PMID : 17142383<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX118 : Mannotetraose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of mannotetraose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Mannotetraose is a tetrasaccharide (four-part sugar) consisting of mannose via beta-(1,4) linkages.<br />
<br />
part_of: GO:XXXXXX113 : Tetrasaccharide transport<br />
<br />
PMID : 16461685<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX119 : Cellotetraose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of cellotetraose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Cellotetraose is a tetrasaccharide (four-part sugar) consisting of glucose via beta-(1,4) linkages.<br />
<br />
part_of: GO:XXXXXX113 : Tetrasaccharide transport<br />
<br />
PMID : 11489849<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
===GO:XXXXXX120 : Pentasaccharide transport===<br />
<br />
namespace: biological process<br />
<br />
def: The directed movement of pentasaccharides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Pentasaccharides are sugars composed of five monosaccharide units.<br />
<br />
part_of: GO:0015772 : Oligosaccharide transport<br />
<br />
PMID : 12749343, 12700069, <br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX121 : Maltopentaose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of maltopentaose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Maltopentaose is a pentasaccharide (five-part sugar) consisting of three maltose molecules linked with α-1,4 glycosidic linkages. <br />
<br />
part_of: GO:XXXXXX120 : Pentasaccharide transport<br />
<br />
PMID : 12700069, 16321934<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX122 : Galactopentaose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of galactopentaose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Galactopentaose is a pentasaccharide (five-part sugar) consisting of galactose via β-(1→3)or β-(1→4), or β(1,6) linkages.<br />
<br />
part_of: GO:XXXXXX120 : Pentasaccharide transport<br />
<br />
PMID : 17644603<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX123 : Cellopentaose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of cellopentaose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Cellopentaose is a pentasaccharide (Five-part sugar) consisting of glucose via beta-(1,4) linkages.<br />
<br />
part_of: GO:XXXXXX120 : Pentasaccharide transport<br />
<br />
PMID : 11489849<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
<br />
===GO:XXXXXX124 : Hexasaccharide transport===<br />
<br />
namespace: biological process<br />
<br />
def: The directed movement of hexasaccharides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Hexasaccharides are sugars composed of six monosaccharide units.<br />
<br />
part_of: GO:0015772 : Oligosaccharide transport<br />
<br />
PMID : 8805519, 9573146, 12003940, 17644603<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX125 : Maltohexaose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of maltohexaose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Maltohexaose is a hexasaccharide (six-part sugar) consisting of six maltose molecules joined with α-1,4 glycosidic linkages. <br />
<br />
part_of: GO:XXXXXX124 : Hexasaccharide transport<br />
<br />
PMID : 8805519, 9573146, 12003940, 11806922 <br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX126 : Galactohexaose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of galactohexaose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Galactohexaose is a hexasaccharide (six-part sugar) consisting of galactose via α-(1→3)-β-(1→4) linkages.<br />
<br />
part_of: GO:XXXXXX124 : Hexasaccharide transport<br />
<br />
PMID : 17644603<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
===GO:XXXXXX127 : Heptasaccharide transport===<br />
<br />
namespace: biological process<br />
<br />
def: The directed movement of heptasaccharides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Heptasaccharides are sugars composed of seven monosaccharide units.<br />
<br />
part_of: GO:0015772 : Oligosaccharide transport<br />
<br />
PMID : <br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX128 : Maltoheptaose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of maltoheptaose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Maltoheptaose is a heptasaccharide (seven-part sugar) consisting of seven maltose molecules joined by α-1,4 glycosidic linkages. <br />
<br />
part_of: GO:XXXXXX127 : Heptasaccharide transport<br />
<br />
PMID : 11806922<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]</div>
Epurwant
https://wiki.geneontology.org/index.php?title=Methane_biosynthesis&diff=37468
Methane biosynthesis
2011-10-06T13:39:41Z
<p>Epurwant: </p>
<hr />
<div>Working Group Members<br />
*<br />
*<br />
*<br />
<br />
<br />
==Endang_06/22/11==<br />
<br />
====GO:XXXXXX71 : Methanogenesis from formate====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including formic acid.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 6769911, 16346087, 2687241<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX72 : Methanogenesis from monomethylamine ====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including monomethylamine.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16346215<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX73 : Methanogenesis from dimethylamine ====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including dimethylamine.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16346215<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX73 : Methanogenesis from trimethylamine ====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including trimethylamine.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16346215<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
<br />
====GO:XXXXXX74 : Methanogenesis from dimethysulfide====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including dimethylsulfide.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 9371433, 16347202<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX75 : Methanogenesis from methylmercaptopropionate====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including methylmercaptopropionate.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 9371433<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX76 : Methanogenesis from methanethiol====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including methanethiol.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16347202<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX77 : Methanogenesis from carbonmonoxide====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including carbonmonoxide.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16348788, 18575848, 19191870, <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX78 : Methanopterin biosynthetic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways resulting in the formation of methanopterin, an N-[1′-(2″-amino-4″-hydroxy-7″- methyl-6″- pteridinyl)ethyl]-4-[2′,3′,4′,5′- tetrahydroxypent-1′- yl (5′→1″) O-α-ribofuranosyl-5″-phosphoric acid] aniline, in which the phosphate group is esterified with α-hydroxyglutaric acid.<br />
<br />
is_a : GO:0042559 pteridine-containing compound biosynthetic process<br />
<br />
PMID : 6319137<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX79 : Tetrahydromethanopterin biosynthetic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways resulting in the formation of tetrahydromethanopterin (H4MPT), an (2S)-2-[[(2R,3S,4R,5S)-5-[(2R,3S,4S)-5-[4-[[(1R)-1-[(7S)-2-amino-7-methyl-4-oxo-5,6,7,8-tetrahydro-1H-pteridin-6-yl]ethyl]amino]phenyl]-2,3,4-trihydroxypentoxy]-3,4-dihydroxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxypentanedioic acid<br />
<br />
is_a : GO:0042559 pteridine-containing compound biosynthetic process<br />
<br />
PMID : 6547718, 15028691, 14973120<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX80 : Tetrahydromethanopterin metabolic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways involving tetrahydromethanopterin, a coenzyme involved in the biosynthesis of methane by methanogenic archaea.<br />
<br />
Is_a: GO:0006732 : coenzyme metabolic process<br />
<br />
PMID : 6547718, 2403564, 7852356, 11265475<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX81 : Methanofuran biosynthetic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways resulting in the formation of methanofuran, a 7-[[5-[[5-[2-[4-[[5-(aminomethyl)furan-3-yl]methoxy]phenyl]ethylamino]-1-hydroxy-1,5-dioxopentan-2-yl]amino]-1-hydroxy-1,5-dioxopentan-2-yl]amino]-7-oxoheptane-1,3,4-tricarboxylic acid<br />
<br />
is_a: GO:0018130 : Heterocyclic biosynthetic process<br />
<br />
PMID : 3166985, 1517208, 12013276, 3170480<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX82 : Methanofuran metabolic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways involving methanofuran, a coenzyme involved in the biosynthesis of methane by methanogenic archaea.<br />
<br />
Is_a: GO:0006732 : coenzyme metabolic process<br />
<br />
PMID : 3922409, 12102556 <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX83 : Coenzyme F420 biosynthetic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways resulting in the formation of coenzyme F420, def: The chemical reactions and pathways resulting in the formation of coenzyme F420, a N-[N-[O-[5-(8-hydroxy-5-deazaisoalloxazin-10-yl)-2,3,4-trihydroxy-4-pentoxyhydroxyphosphinyl]-L-lactyl]-gamma-L-glutamyl]-L-glutamic acid. The number of glutamic acid residues varied from two to seven.<br />
<br />
is_a: GO:0042727 : flavin-containing compound biosynthetic process<br />
<br />
PMID : 11717263, 11948155, 11535063, 11888293, 12909715, 16585745, 18260642, <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX84 : Coenzyme F420-dependent metabolic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways involving coenzyme F420, a coenzyme involved in the biosynthesis of methane by methanogenic archaea and many other reaction in Bacteria and Eukarya.<br />
<br />
Is_a: GO:0006732 : coenzyme metabolic process<br />
<br />
PMID : 21038477, <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX85 : Coenzyme F420-dependent anabolic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways involving coenzyme F420, a deazaflavin derivative, in the synthesis of a molecule such as in methane biosynthesis.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 20534465<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX86 : Coenzyme F420-dependent catabolic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways involving an enzyme cofactor consisting of coenzyme F420, a deazaflavin derivative, in the degradation of a molecule such as in aflatoxin and picric acid degradations.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 20807200, 21038477, 10217752<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX87 : Coenzyme F420-dependent glucose-6-phosphate dehydrogenase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving coenzyme F420, a deazaflavin derivative, in the conversion of glucose-6-phosphate to 6-phosphogluconolactone.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 8631674, 8997717, 9555906, 18434308<br />
<br />
E.C. EC 1.1.99.34<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX88 : Coenzyme F420-dependent nitroreductase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving coenzyme F420, a deazaflavin derivative, in the conversion of <br />
a nitroimidazopyran (such as PA824, a new antituberculosis drug) to its nitronic acid derivative.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 16387854, 19039139.<br />
<br />
E.C. <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX89 : Coenzyme F420-dependent aflatoxin reductase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving coenzyme F420, a deazaflavin derivative, in the reduction of <br />
furanocumarin moiety of aflatoxin.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 20807200, 21038477<br />
<br />
E.C. 1.---<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX90 : Coenzyme F420-dependent NADP oxidoreductase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving a reduced form of coenzyme F420 (F420H2) to convert NADP+ to NADP(H). <br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 9821972, 11109487, 11726492<br />
<br />
E.C. 1.6.8.-<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX91 : Coenzyme F420-dependent deoxyribodipyrimidine photolyase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: is a DNA repair enzyme. It binds to UV-damaged DNA containing pyrimidine dimers and, upon absorbing a near-UV photon (300 to 500 nm), breaks the cyclobutane ring joining the two pyrimidines of the dimer.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 2668276, 2110564, 2282137, 9360600, <br />
<br />
E.C. 4.1.99.3<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX92 : Coenzyme F420-dependent sulfite reductase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving coenzyme F420 in the conversion of sulfite to sulfide.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 16048999, 16048999<br />
<br />
E.C. 1.--- <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX93 : Coenzyme F420H2-oxidase activity ====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction which converts a reduced form of coenzyme F420 (F420H2) to F420 in the presence of molecular oxygen.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
E.C. 1.---<br />
<br />
PMID : 15340796, 17480207<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX94 : Coenzyme F420-dependent heterodisulfide oxidoreductase activity ====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving a reduced form of coenzyme F420 (F420H2) in the reduction the heterodisulfide bond of 2-mercaptoethanesulfonate and 7-mercaptoheptanoylthreonine phosphate.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 9914308, 11607121<br />
<br />
E.C. <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX95 : Coenzyme F420-dependent 2,4,6-trinitrophenol reductase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving coenzyme F420 in the hydrogenation of 2,4,6-trinitrophenol (picric acid) generating the hydride sigma-complex of picrate and finally the dihydride complex.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 10217752, 11882715, 11995829<br />
<br />
E.C. 1.3.99.-<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX96 : F420-dependent 2,4-dinitrophenol acid reductase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving coenzyme F420 in the hydrogenation of 2,4,-dinitrophenol generating the hydride sigma-complex of 2,4-dinitrophenol.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 10217752, 11995829, 12732545<br />
<br />
E.C. 1.3.99.-<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX97 : F420 dependent secondary alcohol dehydrogenase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving coenzyme F420 in the oxidation of isopropanol to acetone with the concomitant reduction of F420 to F420H2<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 1879431, 8706724, 15016352, <br />
<br />
E.C : 1.1.99.–<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX98 : Coenzyme F390-G synthetase (GTP:coenzyme F420 guanyltransferase) activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction catalyzing the transfer of guanylyl moiety to coenzyme F420 to form 8-hydroxyguanylylated-coenzyme F420 (coenzyme F390-G).<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 7957247, 8550473, 9352911<br />
<br />
E.C. 2.7.7.–<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX99 : Coenzyme F390 hydrolase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction catalyzing the hydrolysis of 8-hydroxyguanylylated-coenzyme F420 (coenzyme F390-G) into coenzyme F420 and GMP under anaerobic condition.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 8536708, 9352911<br />
<br />
E.C : 3.1.4.-<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX100 : F420H2-dependent quinone oxidoreductase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: F420H2: quinone oxidoreductase complex catalyze the reduction of 2,3-dimethyl-1,4-naphthoquinone with the concomitant oxidation of F420H2 to F420 <br />
<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 8055920, 10971593<br />
<br />
E.C. : 1.5.5.-<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX101 : F0-dependent light harvesting activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving Fo (a non-glutamated of coenzyme F420) as a light-harvesting antenna chromophore.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 19570997<br />
<br />
E.C. <br />
<br />
[GOC:MENGO_EP]</div>
Epurwant
https://wiki.geneontology.org/index.php?title=Methane_biosynthesis&diff=37083
Methane biosynthesis
2011-09-13T13:03:28Z
<p>Epurwant: </p>
<hr />
<div>Working Group Members<br />
*<br />
*<br />
*<br />
<br />
<br />
==Endang_06/22/11==<br />
<br />
====GO:XXXXXX71 : Methanogenesis from formate====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including formic acid.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 6769911, 16346087, 2687241<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX72 : Methanogenesis from monomethylamine ====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including monomethylamine.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16346215<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX73 : Methanogenesis from dimethylamine ====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including dimethylamine.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16346215<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX73 : Methanogenesis from trimethylamine ====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including trimethylamine.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16346215<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
<br />
====GO:XXXXXX74 : Methanogenesis from dimethysulfide====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including dimethylsulfide.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 9371433, 16347202<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX75 : Methanogenesis from methylmercaptopropionate====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including methylmercaptopropionate.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 9371433<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX76 : Methanogenesis from methanethiol====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including methanethiol.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16347202<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX77 : Methanogenesis from carbonmonoxide====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including carbonmonoxide.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16348788, 18575848, 19191870, <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX78 : Methanopterin biosynthetic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways resulting in the formation of methanopterin, an N-[1′-(2″-amino-4″-hydroxy-7″- methyl-6″- pteridinyl)ethyl]-4-[2′,3′,4′,5′- tetrahydroxypent-1′- yl (5′→1″) O-α-ribofuranosyl-5″-phosphoric acid] aniline, in which the phosphate group is esterified with α-hydroxyglutaric acid.<br />
<br />
is_a : GO:0042559 pteridine-containing compound biosynthetic process<br />
<br />
PMID : 6319137<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX79 : Tetrahydromethanopterin biosynthetic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways resulting in the formation of tetrahydromethanopterin (H4MPT), an (2S)-2-[[(2R,3S,4R,5S)-5-[(2R,3S,4S)-5-[4-[[(1R)-1-[(7S)-2-amino-7-methyl-4-oxo-5,6,7,8-tetrahydro-1H-pteridin-6-yl]ethyl]amino]phenyl]-2,3,4-trihydroxypentoxy]-3,4-dihydroxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxypentanedioic acid<br />
<br />
is_a : GO:0042559 pteridine-containing compound biosynthetic process<br />
<br />
PMID : 6547718, 15028691, 14973120<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX80 : Tetrahydromethanopterin metabolic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways involving tetrahydromethanopterin, a coenzyme involved in the biosynthesis of methane by methanogenic archaea.<br />
<br />
Is_a: GO:0006732 : coenzyme metabolic process<br />
<br />
PMID : 6547718, 2403564, 7852356, 11265475<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX81 : Methanofuran biosynthetic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways resulting in the formation of methanofuran, a 7-[[5-[[5-[2-[4-[[5-(aminomethyl)furan-3-yl]methoxy]phenyl]ethylamino]-1-hydroxy-1,5-dioxopentan-2-yl]amino]-1-hydroxy-1,5-dioxopentan-2-yl]amino]-7-oxoheptane-1,3,4-tricarboxylic acid<br />
<br />
is_a: GO:0018130 : Heterocyclic biosynthetic process<br />
<br />
PMID : 3166985, 1517208, 12013276, 3170480<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX82 : Methanofuran metabolic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways involving methanofuran, a coenzyme involved in the biosynthesis of methane by methanogenic archaea.<br />
<br />
Is_a: GO:0006732 : coenzyme metabolic process<br />
<br />
PMID : 3922409, 12102556 <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX83 : Coenzyme F420 biosynthetic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways resulting in the formation of coenzyme F420, def: The chemical reactions and pathways resulting in the formation of coenzyme F420, a N-[N-[O-[5-(8-hydroxy-5-deazaisoalloxazin-10-yl)-2,3,4-trihydroxy-4-pentoxyhydroxyphosphinyl]-L-lactyl]-gamma-L-glutamyl]-L-glutamic acid. The number of glutamic acid residues varied from two to seven.<br />
<br />
is_a: GO:0042727 : flavin-containing compound biosynthetic process<br />
<br />
PMID : 11717263, 11948155, 11535063, 11888293, 12909715, 16585745, 18260642, <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX84 : Coenzyme F420-dependent metabolic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways involving coenzyme F420, a coenzyme involved in the biosynthesis of methane by methanogenic archaea and many other reaction in Bacteria and Eukarya.<br />
<br />
Is_a: GO:0006732 : coenzyme metabolic process<br />
<br />
PMID : 21038477, <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX85 : Coenzyme F420-dependent anabolic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways involving coenzyme F420, a deazaflavin derivative, in the synthesis of a molecule such as in methane biosynthesis.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 20534465<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX86 : Coenzyme F420-dependent catabolic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways involving an enzyme cofactor consisting of coenzyme F420, a deazaflavin derivative, in the degradation of a molecule such as in aflatoxin and picric acid degradations.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 20807200, 21038477, 10217752<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX87 : Coenzyme F420-dependent glucose-6-phosphate dehydrogenase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving coenzyme F420, a deazaflavin derivative, in the conversion of glucose-6-phosphate to 6-phosphogluconolactone.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 8631674, 8997717, 9555906, 18434308<br />
<br />
E.C. EC 1.1.99.34<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX88 : Coenzyme F420-dependent nitroreductase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving coenzyme F420, a deazaflavin derivative, in the conversion of <br />
a nitroimidazopyran (such as PA824, a new antituberculosis drug) to its nitronic acid derivative.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 16387854, 19039139.<br />
<br />
E.C. <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX89 : Coenzyme F420-dependent aflatoxin reductase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving coenzyme F420, a deazaflavin derivative, in the reduction of <br />
furanocumarin moiety of aflatoxin.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 20807200, 21038477<br />
<br />
E.C. 1.---<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX90 : Coenzyme F420-dependent NADP oxidoreductase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving a reduced form of coenzyme F420 (F420H2) to convert NADP+ to NADP(H). <br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 9821972, 11109487, 11726492<br />
<br />
E.C. 1.6.8.-<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX91 : Coenzyme F420-dependent deoxyribodipyrimidine photolyase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: is a DNA repair enzyme. It binds to UV-damaged DNA containing pyrimidine dimers and, upon absorbing a near-UV photon (300 to 500 nm), breaks the cyclobutane ring joining the two pyrimidines of the dimer.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 2668276, 2110564, 2282137, 9360600, <br />
<br />
E.C. 4.1.99.3<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX92 : Coenzyme F420-dependent sulfite reductase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving coenzyme F420 in the conversion of sulfite to sulfide.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 16048999, 16048999<br />
<br />
E.C. 1.--- <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX93 : Coenzyme F420H2-oxidase activity ====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction which converts a reduced form of coenzyme F420 (F420H2) to F420 in the presence of molecular oxygen.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
E.C. 1.---<br />
<br />
PMID : 15340796, 17480207<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX94 : Coenzyme F420-dependent heterodisulfide oxidoreductase activity ====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving a reduced form of coenzyme F420 (F420H2) in the reduction the heterodisulfide bond of 2-mercaptoethanesulfonate and 7-mercaptoheptanoylthreonine phosphate.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 9914308, 11607121<br />
<br />
E.C. <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX95 : Coenzyme F420-dependent 2,4,6-trinitrophenol reductase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving coenzyme F420 in the hydrogenation of 2,4,6-trinitrophenol (picric acid) generating the hydride sigma-complex of picrate and finally the dihydride complex.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 10217752, 11882715, 11995829<br />
<br />
E.C. 1.3.99.-<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX96 : F420-dependent 2,4-dinitrophenol acid reductase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving coenzyme F420 in the hydrogenation of 2,4,-dinitrophenol generating the hydride sigma-complex of 2,4-dinitrophenol.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 10217752, 11995829, 12732545<br />
<br />
E.C. 1.3.99.-<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX97 : F420 dependent secondary alcohol dehydrogenase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving coenzyme F420 in the oxidation of isopropanol to acetone with the concomitant reduction of F420 to F420H2<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 1879431, 8706724, 15016352, <br />
<br />
E.C : 1.1.99.–<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX98 : Coenzyme F390-G synthetase (GTP:coenzyme F420 guanyltransferase) activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction catalyzing the transfer of guanylyl moiety to coenzyme F420 to form 8-hydroxyguanylylated-coenzyme F420 (coenzyme F390-G).<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 7957247, 8550473, 9352911<br />
<br />
E.C. 2.7.7.–<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX99 : Coenzyme F390 hydrolase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction catalyzing the hydrolysis of 8-hydroxyguanylylated-coenzyme F420 (coenzyme F390-G) into coenzyme F420 and AMP under anaerobic condition.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 8536708, 9352911<br />
<br />
E.C : 3.1.4.-<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX100 : F420H2-dependent quinone oxidoreductase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: F420H2: quinone oxidoreductase complex catalyze the reduction of 2,3-dimethyl-1,4-naphthoquinone with the concomitant oxidation of F420H2 to F420 <br />
<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 8055920, 10971593<br />
<br />
E.C. : 1.5.5.-<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX101 : F0-dependent light harvesting activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving Fo (a non-glutamated of coenzyme F420) as a light-harvesting antenna chromophore.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 19570997<br />
<br />
E.C. <br />
<br />
[GOC:MENGO_EP]</div>
Epurwant
https://wiki.geneontology.org/index.php?title=MENGO_Carbohydrate_binding&diff=36879
MENGO Carbohydrate binding
2011-08-19T18:47:47Z
<p>Epurwant: </p>
<hr />
<div>Working Group Members<br />
*<br />
*<br />
*<br />
==Endang_05/17/11==<br />
<br />
====GO:XXXXXX12: xylan binding====<br />
<br />
namespace: molecular_function<br />
<br />
def: Interacting selectively and non-covalently with xylan, a polymer of more than 20 D-xylose residues joined by beta-(1,4) glycosidic linkages<br />
<br />
is_a : GO:0030247! polysaccharide binding<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX13: beta-1,3-1,4-glucan binding====<br />
<br />
namespace: molecular_function<br />
<br />
def: Interacting selectively and non-covalently with beta-1,3-1,4-glucan, a polymer of more than 20 D-glucose residues joined by beta-1,3 and beta-(1,4) glycosidic linkages<br />
<br />
is_a : GO:0030247! polysaccharide binding<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
<br />
====GO:XXXXXX14: beta-1,6-glucan binding====<br />
<br />
namespace: molecular_function<br />
<br />
def: Interacting selectively and non-covalently with beta-1,6-glucan, a polymer of more than 20 D-glucose residues joined by glycosidic linkages<br />
<br />
is_a : GO:0030247! polysaccharide binding<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX15: amorphous cellulose binding====<br />
<br />
namespace: molecular_function<br />
<br />
def: Interacting selectively and non-covalently with amorphous cellulose, a linear polymer of more than several hundred to over ten thousand D-glucose residues joined by beta-(1,4) glycosidic linkages<br />
<br />
is_a : GO:0030247! polysaccharide binding<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX16: crystalline cellulose binding====<br />
<br />
namespace: molecular_function<br />
<br />
def: Interacting selectively and non-covalently with crystalline cellulose, a polymer of several hundred to over ten thousand D-glucose residues joined by beta-(1,4) glycosidic linkages<br />
<br />
is_a : GO:0030247! polysaccharide binding<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX17: Xylooligosaccharide binding====<br />
<br />
namespace: molecular_function<br />
<br />
def: Interacting selectively and non-covalently with xyloligosaccharide, a molecule with between two and (about) 20 xylose residues connected by beta-(1,4) glycosidic linkages<br />
<br />
is_a : GO:0070492! oligosaccharide binding<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX18: glucomannan binding====<br />
<br />
namespace: molecular_function<br />
<br />
def: Interacting selectively and non-covalently with glucomannan, a straight-chain polymer, with a small amount of branching. The component sugars are β-(1→4)-linked D-mannose and D-glucose in a ratio of 1.6:1<br />
<br />
is_a : GO:0030247! polysaccharide binding<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX19: Cellooligosaccharides binding====<br />
<br />
namespace: molecular_function<br />
<br />
def: Interacting selectively and non-covalently with Cellooligosaccharides, a molecule with between two and (about) 20 D-glucose residues connected by mixed alpha/beta(1-4) glycosidic linkages<br />
<br />
is_a : GO:0070492! oligosaccharide binding<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX20: cyclodextrin binding====<br />
<br />
namespace: molecular_function<br />
<br />
def: Interacting selectively and non-covalently with cyclodextrin (or cycloamyloses), a molecule with between two and (about) 20 D-glucose residues connected by alpha-(1,4) glycosidic linkages in a ring structure (cyclic oligosaccharides)<br />
<br />
is_a : GO:0070492! oligosaccharide binding<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX21: mannan binding====<br />
<br />
namespace: molecular_function<br />
<br />
def: Interacting selectively and non-covalently with mannan, a polymer of more than 20 mannose residues joined by alpha-(1,4) glycosidic linkages<br />
<br />
is_a : GO:0030247! polysaccharide binding<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX22: polygalacturonic (pectic) acid binding====<br />
<br />
namespace: molecular_function<br />
<br />
def: Interacting selectively and non-covalently with polygalacturonic (pectic) acid, a polymer of more than 20 of an oxidized form of D-galactose residues joined by alpha-(1,4) glycosidic linkages<br />
<br />
is_a : GO:0030247! polysaccharide binding<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX23: β-D-galactosyl-1,4-β-D-N-acetylglucosamine====<br />
<br />
namespace: molecular_function<br />
<br />
def: Interacting selectively and non-covalently with β-D-galactosyl-1,4-β-D-N-acetylglucosamine, a molecule with between two and (about) 20 D-galactose and D-N-acetylglucosamine residues connected by glycosidic linkages <br />
<br />
is_a : GO:0070492! oligosaccharide binding<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX24: chitosan binding====<br />
<br />
namespace: molecular_function<br />
<br />
def: Interacting selectively and non-covalently with chitosan, a polymer of more than 20 D-glucosamine and N-acetyl-D_glucosamine residues joined by β-(1,4) glycosidic linkages<br />
<br />
is_a : GO:0030247! polysaccharide binding<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
<br />
====GO:XXXXXX25: beta-galactan binding====<br />
<br />
namespace: molecular_function<br />
<br />
def: Interacting selectively and non-covalently with beta-galactan, a polymer of more than 20 of galactose residues joined by β-(1,4) glycosidic linkages<br />
<br />
is_a : GO:0030247! polysaccharide binding<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX26: inulin binding====<br />
<br />
namespace: molecular_function<br />
<br />
def: Interacting selectively and non-covalently with inulin, a polymer of more than 20 of fructose units, and typically have a terminal glucose residues. The fructose units in inulins are joined by a β(2→1) glycosidic linkages<br />
<br />
is_a : GO:0030247! polysaccharide binding<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX27: alpha-glucan binding====<br />
<br />
namespace: molecular_function<br />
<br />
def: Interacting selectively and non-covalently with alpha-glucan, a polymer of more than 20 of D-glucose residues joined by alpha-(1,4) and alpha-(1,6) glycosidic linkages<br />
<br />
is_a : GO:0030247! polysaccharide binding<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX28: amylopectin binding====<br />
<br />
namespace: molecular_function<br />
<br />
def: Interacting selectively and non-covalently with amylopectin, a polysaccharide and highly branched polymer of glucose found in plants. It is one of the two components of starch, the other being amylose. Glucose units are linked in a linear way with α(1→4) glycosidic bonds. Branching takes place with α(1→6) bonds occurring every 24 to 30 glucose units<br />
<br />
is_a : GO:0030247! polysaccharide binding<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX29: pullulan binding====<br />
<br />
namespace: molecular_function<br />
<br />
def: Interacting selectively and non-covalently with pullulan, a polysaccharide polymer consisting of maltotriose units, also known as α-1,4- ;α-1,6-glucan. Three glucose units in maltotriose are connected by an α-1,4 glycosidic bond, whereas consecutive maltotriose units are connected to each other by an α-1,6 glycosidic bond<br />
<br />
is_a : GO:0030247! polysaccharide binding<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX30: arabinofuranose binding====<br />
<br />
namespace: molecular_function<br />
<br />
def: Interacting selectively and non-covalently with monosaccharide arabinofuranose<br />
<br />
is_a : GO:0048029! monosaccharide binding<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX31: arabinoxylan binding====<br />
<br />
namespace: molecular_function<br />
<br />
def: Interacting selectively and non-covalently with arabinoxylan, a bipolymers of more than 20 residues of two pentose sugars, arabinose and xylose. Arabinoxylan contains a chain of 1,4-linked xylose units. Many xylose units are substituted with 2,3 or 2,3-linked arabinose residues<br />
<br />
is_a : GO:0030247! polysaccharide binding<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX32: glycogen binding====<br />
<br />
namespace: molecular_function<br />
<br />
def: Interacting selectively and non-covalently with glycogen, a branched polysaccharide polymer consisting of D-glucose unit<br />
<br />
is_a : GO:0030247! polysaccharide binding<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX33: starch binding====<br />
<br />
namespace: molecular_function<br />
<br />
def: Interacting selectively and non-covalently with starch, a polymer consists of linear and helical amylose and the branched amylopectinglucose residues joined by alpha-(1,4) and alpha-(1,6) glycosidic linkages. <br />
<br />
is_a : GO:0030247! polysaccharide binding<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX34: maltoheptaose binding====<br />
<br />
namespace: molecular_function<br />
<br />
def: Interacting selectively and non-covalently with maltoheptaose, an oligosaccharide consisted of seven unit of maltose joined by alpha-(1,4) glycosidic linkages<br />
<br />
is_a : GO:0070492! oligosaccharide binding<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX35: arabinogalactan binding====<br />
<br />
namespace: molecular_function<br />
<br />
def: Interacting selectively and non-covalently with arabinogalactan, polysaccharide consisting of arabinose and galactose monosaccharides joined by glycosidic linkages. Two classes of arabinogalactans are found in nature: plant arabinogalactan and microbial arabinogalactan. The galactan portion of the microbial arabinogalactan is linear, consisting of approximately 30 units with alternating β-(1-5) and β-(1-6) glycosidic linkages. The arabinan chain, which consist of about 30 residues, are attached at three branch points within the galactan chain (believed to be at residues 8, 10 and 12). The arabinan portion of the polymer is a complex branched structure. The arabinan glycosidic linkages are α-(1-3), α-(1-5), and β-(1-2).<br />
<br />
is_a : GO:0030247! polysaccharide binding<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX36: galactomannan binding====<br />
<br />
namespace: molecular_function<br />
<br />
def: Interacting selectively and non-covalently with galactomannan, polysaccharides consisting of a mannose backbone with galactose side groups (more specifically, a (1-4)-linked beta-D-mannopyranose backbone with branchpoints from their 6-positions linked to alpha-D-galactose, i.e. 1-6-linked alpha-D-galactopyranose)<br />
<br />
is_a : GO:0030247! polysaccharide binding<br />
<br />
[GOC:MENGO_EP]</div>
Epurwant
https://wiki.geneontology.org/index.php?title=Alkene_biosynthesis&diff=36801
Alkene biosynthesis
2011-08-15T13:42:59Z
<p>Epurwant: </p>
<hr />
<div>Working Group<br />
*<br />
*<br />
*<br />
<br />
<br />
====GO:XXXXX106 : Pentadecene biosynthetic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways resulting in the formation of a pentadecene, an unbranched fifteen hydrocarbon having the general formula C15H30 with one carbon-carbon double bond.<br />
<br />
is_a : GO:0043450 alkene biosynthetic process<br />
<br />
PMID : 20671186<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXX107 : Heptadecene biosynthetic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways resulting in the formation of a heptadecene, an unbranched seventeen hydrocarbon having the general formula C17H34 with one carbon-carbon double bond.<br />
<br />
is_a : GO:0043450 alkene biosynthetic process<br />
<br />
PMID : 20671186<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXX108 : Olefin biosynthetic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways resulting in the formation of olefin, an unsaturated open-chain hydrocarbons having the general formula CnH2n with one carbon-carbon double bond.<br />
<br />
is_a : GO:0043450 alkene biosynthetic process<br />
<br />
PMID : 20038703, 19168653, 21266575, 21531827 <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXX109 : 1-octadecene biosynthetic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways resulting in the formation of 1-octadecene, an unsaturated open-chain hydrocarbons having the general formula C18H36 with one carbon-carbon double bond.<br />
<br />
is_a : GO:0043450 alkene biosynthetic process<br />
<br />
PMID : 21531827<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXX110 : 1-nonadecene biosynthetic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways resulting in the formation of 1-nonadecene, an unsaturated open-chain hydrocarbons having the general formula C19H38 with one carbon-carbon double bond.<br />
<br />
is_a : GO:0043450 alkene biosynthetic process<br />
<br />
PMID : 21531827<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXX111 : 1,14-nonadecadiene biosynthetic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways resulting in the formation of 1,14-nonadecadiene, an unsaturated open-chain hydrocarbons having the general formula C19H36 with two carbon-carbon double bond.<br />
<br />
is_a : GO:0043450 alkene biosynthetic process<br />
<br />
PMID : 21531827<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXX112 : Isoprene biosynthetic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways resulting in the formation of isoprene (2-methyl-1,3-butadiene), an unsaturated hydrocarbon chain having the general formula C5H8 with two carbon-carbon double bond.<br />
<br />
is_a : GO:0043450 alkene biosynthetic process<br />
<br />
PMID : 21296950, 21296950, 21203966,19011917,12735695<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXX113 : 18-methyl-1-nonadecene biosynthetic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways resulting in the formation of 18-methyl-1-nonadecene, an unsaturated hydrocarbons chain having the general formula C19H38 with one carbon-carbon double bond.<br />
<br />
is_a : GO:0043450 alkene biosynthetic process<br />
<br />
PMID : 21216900<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXX114 : 17-methyl-1-nonadecene biosynthetic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways resulting in the formation of 17-methyl-1-nonadecene, an unsaturated hydrocarbons chain having the general formula C19H38 with one carbon-carbon double bond.<br />
<br />
is_a : GO:0043450 alkene biosynthetic process<br />
<br />
PMID : 21216900<br />
<br />
[GOC:MENGO_EP]</div>
Epurwant
https://wiki.geneontology.org/index.php?title=Alkane_biosynthesis&diff=36800
Alkane biosynthesis
2011-08-15T13:42:08Z
<p>Epurwant: </p>
<hr />
<div>Working Group<br />
*<br />
*<br />
*<br />
<br />
<br />
====GO:XXXXX102 : Tridecane biosynthetic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways resulting in the formation of tridecane, a linear thirteen carbon chain having the general formula C13H28.<br />
<br />
is_a : GO:0043447, alkane biosynthetic process<br />
<br />
PMID : 20671186<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXX103 : Pentadecane biosynthetic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways resulting in the formation of pentadecane, a linear fifteen carbon chain having the general formula C15H32.<br />
<br />
is_a : GO:0043447, alkane biosynthetic process<br />
<br />
PMID : 20671186<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXX104 : Heptadecane biosynthetic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways resulting in the formation of heptadecane, a linear seventeen carbon chain having the general formula C17H36.<br />
<br />
is_a : GO:0043447, alkane biosynthetic process<br />
<br />
PMID : 20671186<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXX105 : Hexadecane biosynthetic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways resulting in the formation of hexadecane, a linear sixteen carbon chain having the general formula C16H34.<br />
<br />
is_a : GO:0043447, alkane biosynthetic process<br />
<br />
PMID : 15687207<br />
<br />
[GOC:MENGO_EP]</div>
Epurwant
https://wiki.geneontology.org/index.php?title=Alkene_biosynthesis&diff=36797
Alkene biosynthesis
2011-08-15T13:37:23Z
<p>Epurwant: Created page with "Working Group ====GO:XXXXX106 : Pentadecene biosynthetic process==== namespace: biological_process def: The chemical reactions and pathways resulting in the formation of..."</p>
<hr />
<div>Working Group<br />
<br />
<br />
====GO:XXXXX106 : Pentadecene biosynthetic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways resulting in the formation of a pentadecene, an unbranched fifteen hydrocarbon having the general formula C15H30 with one carbon-carbon double bond.<br />
<br />
is_a : GO:0043450 alkene biosynthetic process<br />
<br />
PMID : 20671186<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXX107 : Heptadecene biosynthetic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways resulting in the formation of a heptadecene, an unbranched seventeen hydrocarbon having the general formula C17H34 with one carbon-carbon double bond.<br />
<br />
is_a : GO:0043450 alkene biosynthetic process<br />
<br />
PMID : 20671186<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXX108 : Olefin biosynthetic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways resulting in the formation of olefin, an unsaturated open-chain hydrocarbons having the general formula CnH2n with one carbon-carbon double bond.<br />
<br />
is_a : GO:0043450 alkene biosynthetic process<br />
<br />
PMID : 20038703, 19168653, 21266575, 21531827 <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXX109 : 1-octadecene biosynthetic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways resulting in the formation of 1-octadecene, an unsaturated open-chain hydrocarbons having the general formula C18H36 with one carbon-carbon double bond.<br />
<br />
is_a : GO:0043450 alkene biosynthetic process<br />
<br />
PMID : 21531827<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXX110 : 1-nonadecene biosynthetic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways resulting in the formation of 1-nonadecene, an unsaturated open-chain hydrocarbons having the general formula C19H38 with one carbon-carbon double bond.<br />
<br />
is_a : GO:0043450 alkene biosynthetic process<br />
<br />
PMID : 21531827<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXX111 : 1,14-nonadecadiene biosynthetic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways resulting in the formation of 1,14-nonadecadiene, an unsaturated open-chain hydrocarbons having the general formula C19H36 with two carbon-carbon double bond.<br />
<br />
is_a : GO:0043450 alkene biosynthetic process<br />
<br />
PMID : 21531827<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXX112 : Isoprene biosynthetic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways resulting in the formation of isoprene (2-methyl-1,3-butadiene), an unsaturated hydrocarbon chain having the general formula C5H8 with two carbon-carbon double bond.<br />
<br />
is_a : GO:0043450 alkene biosynthetic process<br />
<br />
PMID : 21296950, 21296950, 21203966,19011917,12735695<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXX113 : 18-methyl-1-nonadecene biosynthetic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways resulting in the formation of 18-methyl-1-nonadecene, an unsaturated hydrocarbons chain having the general formula C19H38 with one carbon-carbon double bond.<br />
<br />
is_a : GO:0043450 alkene biosynthetic process<br />
<br />
PMID : 21216900<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXX114 : 17-methyl-1-nonadecene biosynthetic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways resulting in the formation of 17-methyl-1-nonadecene, an unsaturated hydrocarbons chain having the general formula C19H38 with one carbon-carbon double bond.<br />
<br />
is_a : GO:0043450 alkene biosynthetic process<br />
<br />
PMID : 21216900<br />
<br />
[GOC:MENGO_EP]</div>
Epurwant
https://wiki.geneontology.org/index.php?title=Alkane_biosynthesis&diff=36796
Alkane biosynthesis
2011-08-15T13:35:27Z
<p>Epurwant: Created page with "Working Group ====GO:XXXXX102 : Tridecane biosynthetic process==== namespace: biological_process def: The chemical reactions and pathways resulting in the formation of tride..."</p>
<hr />
<div>Working Group<br />
<br />
<br />
====GO:XXXXX102 : Tridecane biosynthetic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways resulting in the formation of tridecane, a linear thirteen carbon chain having the general formula C13H28.<br />
<br />
is_a : GO:0043447, alkane biosynthetic process<br />
<br />
PMID : 20671186<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXX103 : Pentadecane biosynthetic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways resulting in the formation of pentadecane, a linear fifteen carbon chain having the general formula C15H32.<br />
<br />
is_a : GO:0043447, alkane biosynthetic process<br />
<br />
PMID : 20671186<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXX104 : Heptadecane biosynthetic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways resulting in the formation of heptadecane, a linear seventeen carbon chain having the general formula C17H36.<br />
<br />
is_a : GO:0043447, alkane biosynthetic process<br />
<br />
PMID : 20671186<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXX105 : Hexadecane biosynthetic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways resulting in the formation of hexadecane, a linear sixteen carbon chain having the general formula C16H34.<br />
<br />
is_a : GO:0043447, alkane biosynthetic process<br />
<br />
PMID : 15687207<br />
<br />
[GOC:MENGO_EP]</div>
Epurwant
https://wiki.geneontology.org/index.php?title=Category:Content_MENGO&diff=36795
Category:Content MENGO
2011-08-15T13:33:24Z
<p>Epurwant: </p>
<hr />
<div>This category is reserved for content pertaining to the Microbial Energy Processes Ontology project, aka MENGO.<br />
<br />
===Using the MENGO wiki===<br />
To access the MENGO wiki:<br />
Go to: http://wiki.geneontology.org/index.php/Category:Content_MENGO<br />
Simply create a new account (clickable on top right corner of page).<br />
Confirmation will be sent to your e-mail. Make sure you reply to be given access to the wiki.<br />
Once on : : http://wiki.geneontology.org/index.php/Category:Content_MENGO<br />
Log on (clickable on top right corner of page)<br />
On category page, click on any topic of interest<br />
click on edit <br />
Type: ==name date== <br />
Post your contribution <br />
Be sure to click on "save page"<br />
Useful Links:<br />
Help pages for using wikis: http://meta.wikimedia.org/wiki/Help:Help ;<br />
Quick guide to formatting wiki text: http://meta.wikimedia.org/wiki/Help:Wikitext<br />
<br />
===Topic list:===<br />
*[[MENGO Microbial Energy Processes Term Development | Microbial Energy Processes Term Development]]<br />
**[[MENGO Microbial Biomass Deconstruction | Microbial Biomass Deconstruction]]<br />
***[[MENGO Cellulosome | Cellulosome]]<br />
***[[MENGO Starch utilization System | Starch Utilization System]]<br />
***[[MENGO Carbohydrate binding | Carbohydrate binding]]<br />
***[[MENGO Oligosaccharide transport | Oligosaccharide transport]]<br />
***[[MENGO Enzyme activity | Enzyme activity]]<br />
***[[MENGO Lignin degradation | Lignin degradation]]<br />
**[[MENGO Alcohol biosynthesis | Alcohol biosynthesis]]<br />
***[[MENGO Ethanol biosynthesis| Ethanol biosynthesis]]<br />
***[[MENGO Butanol biosynthesis| Butanol biosynthesis]]<br />
***[[MENGO Isobutanol biosynthesis | Isobutanol biosynthesis]]<br />
**[[MENGO Alkane/Alkene biosynthesis | Alkane/alkene biosynthesis]]<br />
***[[Alkane biosynthesis | Alkane biosynthesis]]<br />
***[[Alkene biosynthesis | Alkene biosynthesis]]<br />
**[[MENGO Fatty Acid Ester biosynthesis | Fatty Acid Ester biosynthesis]]<br />
***[[MENGO Fatty Acid Methyl Ester (FAME) biosynthesis| Fatty Acid Methyl Ester (FAME) biosynthesis]]<br />
***[[MENGO Fatty Acid Ethyl Ester (FAEE) biosynthesis| Fatty Acid Ethyl Ester (FAEE) biosynthesis]]<br />
**[[MENGO Hydrogen biosynthesis | Hydrogen biosynthesis]]<br />
**[[Methane biosynthesis| Methane biosynthesis]]<br />
**[[MENGO Central Metabolism | Central Metabolism]]<br />
**[[MENGO Protein Structure | Protein Structure]]<br />
**[[MENGO Synthetic Biology | Synthetic Biology]]<br />
**[[MENGO Adding Synonyms | Adding Synonyms]]<br />
**[[MENGO Fixes | Fixes]]<br />
**[[REFERENCES | REFERENCES]]</div>
Epurwant
https://wiki.geneontology.org/index.php?title=Category:Content_MENGO&diff=36794
Category:Content MENGO
2011-08-15T13:32:04Z
<p>Epurwant: </p>
<hr />
<div>This category is reserved for content pertaining to the Microbial Energy Processes Ontology project, aka MENGO.<br />
<br />
===Using the MENGO wiki===<br />
To access the MENGO wiki:<br />
Go to: http://wiki.geneontology.org/index.php/Category:Content_MENGO<br />
Simply create a new account (clickable on top right corner of page).<br />
Confirmation will be sent to your e-mail. Make sure you reply to be given access to the wiki.<br />
Once on : : http://wiki.geneontology.org/index.php/Category:Content_MENGO<br />
Log on (clickable on top right corner of page)<br />
On category page, click on any topic of interest<br />
click on edit <br />
Type: ==name date== <br />
Post your contribution <br />
Be sure to click on "save page"<br />
Useful Links:<br />
Help pages for using wikis: http://meta.wikimedia.org/wiki/Help:Help ;<br />
Quick guide to formatting wiki text: http://meta.wikimedia.org/wiki/Help:Wikitext<br />
<br />
===Topic list:===<br />
*[[MENGO Microbial Energy Processes Term Development | Microbial Energy Processes Term Development]]<br />
**[[MENGO Microbial Biomass Deconstruction | Microbial Biomass Deconstruction]]<br />
***[[MENGO Cellulosome | Cellulosome]]<br />
***[[MENGO Starch utilization System | Starch Utilization System]]<br />
***[[MENGO Carbohydrate binding | Carbohydrate binding]]<br />
***[[MENGO Oligosaccharide transport | Oligosaccharide transport]]<br />
***[[MENGO Enzyme activity | Enzyme activity]]<br />
***[[MENGO Lignin degradation | Lignin degradation]]<br />
**[[MENGO Alcohol biosynthesis | Alcohol biosynthesis]]<br />
***[[MENGO Ethanol biosynthesis| Ethanol biosynthesis]]<br />
***[[MENGO Butanol biosynthesis| Butanol biosynthesis]]<br />
***[[MENGO Isobutanol biosynthesis | Isobutanol biosynthesis]]<br />
**[[MENGO Alkane/Alkene biosynthesis | Alkane/alkene biosynthesis]]<br />
***[[Alkanae biosynthesis | Alkanane biosynthesis]]<br />
**[[MENGO Fatty Acid Ester biosynthesis | Fatty Acid Ester biosynthesis]]<br />
***[[MENGO Fatty Acid Methyl Ester (FAME) biosynthesis| Fatty Acid Methyl Ester (FAME) biosynthesis]]<br />
***[[MENGO Fatty Acid Ethyl Ester (FAEE) biosynthesis| Fatty Acid Ethyl Ester (FAEE) biosynthesis]]<br />
**[[MENGO Hydrogen biosynthesis | Hydrogen biosynthesis]]<br />
**[[Methane biosynthesis| Methane biosynthesis]]<br />
**[[MENGO Central Metabolism | Central Metabolism]]<br />
**[[MENGO Protein Structure | Protein Structure]]<br />
**[[MENGO Synthetic Biology | Synthetic Biology]]<br />
**[[MENGO Adding Synonyms | Adding Synonyms]]<br />
**[[MENGO Fixes | Fixes]]<br />
**[[REFERENCES | REFERENCES]]</div>
Epurwant
https://wiki.geneontology.org/index.php?title=Category:Content_MENGO&diff=36793
Category:Content MENGO
2011-08-15T13:27:50Z
<p>Epurwant: </p>
<hr />
<div>This category is reserved for content pertaining to the Microbial Energy Processes Ontology project, aka MENGO.<br />
<br />
===Using the MENGO wiki===<br />
To access the MENGO wiki:<br />
Go to: http://wiki.geneontology.org/index.php/Category:Content_MENGO<br />
Simply create a new account (clickable on top right corner of page).<br />
Confirmation will be sent to your e-mail. Make sure you reply to be given access to the wiki.<br />
Once on : : http://wiki.geneontology.org/index.php/Category:Content_MENGO<br />
Log on (clickable on top right corner of page)<br />
On category page, click on any topic of interest<br />
click on edit <br />
Type: ==name date== <br />
Post your contribution <br />
Be sure to click on "save page"<br />
Useful Links:<br />
Help pages for using wikis: http://meta.wikimedia.org/wiki/Help:Help ;<br />
Quick guide to formatting wiki text: http://meta.wikimedia.org/wiki/Help:Wikitext<br />
<br />
===Topic list:===<br />
*[[MENGO Microbial Energy Processes Term Development | Microbial Energy Processes Term Development]]<br />
**[[MENGO Microbial Biomass Deconstruction | Microbial Biomass Deconstruction]]<br />
***[[MENGO Cellulosome | Cellulosome]]<br />
***[[MENGO Starch utilization System | Starch Utilization System]]<br />
***[[MENGO Carbohydrate binding | Carbohydrate binding]]<br />
***[[MENGO Oligosaccharide transport | Oligosaccharide transport]]<br />
***[[MENGO Enzyme activity | Enzyme activity]]<br />
***[[MENGO Lignin degradation | Lignin degradation]]<br />
**[[MENGO Alcohol biosynthesis | Alcohol biosynthesis]]<br />
***[[MENGO Ethanol biosynthesis| Ethanol biosynthesis]]<br />
***[[MENGO Butanol biosynthesis| Butanol biosynthesis]]<br />
***[[MENGO Isobutanol biosynthesis | Isobutanol biosynthesis]]<br />
**[[MENGO Alkane/Alkene biosynthesis | Alkane/alkene biosynthesis]]<br />
**[[MENGO Fatty Acid Ester biosynthesis | Fatty Acid Ester biosynthesis]]<br />
***[[MENGO Fatty Acid Methyl Ester (FAME) biosynthesis| Fatty Acid Methyl Ester (FAME) biosynthesis]]<br />
***[[MENGO Fatty Acid Ethyl Ester (FAEE) biosynthesis| Fatty Acid Ethyl Ester (FAEE) biosynthesis]]<br />
**[[MENGO Hydrogen biosynthesis | Hydrogen biosynthesis]]<br />
**[[Methane biosynthesis| Methane biosynthesis]]<br />
**[[MENGO Central Metabolism | Central Metabolism]]<br />
**[[MENGO Protein Structure | Protein Structure]]<br />
**[[MENGO Synthetic Biology | Synthetic Biology]]<br />
**[[MENGO Adding Synonyms | Adding Synonyms]]<br />
**[[MENGO Fixes | Fixes]]<br />
**[[REFERENCES | REFERENCES]]</div>
Epurwant
https://wiki.geneontology.org/index.php?title=Methane_biosynthesis&diff=36590
Methane biosynthesis
2011-08-01T15:59:41Z
<p>Epurwant: </p>
<hr />
<div>Working Group Members<br />
*<br />
*<br />
*<br />
<br />
<br />
==Endang_06/22/11==<br />
<br />
====GO:XXXXXX71 : Methanogenesis from formate====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including formic acid.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 6769911, 16346087, 2687241<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX72 : Methanogenesis from monomethylamine ====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including monomethylamine.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16346215<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX73 : Methanogenesis from dimethylamine ====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including dimethylamine.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16346215<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX73 : Methanogenesis from trimethylamine ====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including trimethylamine.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16346215<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
<br />
====GO:XXXXXX74 : Methanogenesis from dimethysulfide====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including dimethylsulfide.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 9371433, 16347202<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX75 : Methanogenesis from methylmercaptopropionate====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including methylmercaptopropionate.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 9371433<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX76 : Methanogenesis from methanethiol====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including methanethiol.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16347202<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX77 : Methanogenesis from carbonmonoxide====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including carbonmonoxide.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16348788, 18575848, 19191870, <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX78 : Methanopterin biosynthetic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways resulting in the formation of methanopterin, an N-[1′-(2″-amino-4″-hydroxy-7″- methyl-6″- pteridinyl)ethyl]-4-[2′,3′,4′,5′- tetrahydroxypent-1′- yl (5′→1″) O-α-ribofuranosyl-5″-phosphoric acid] aniline, in which the phosphate group is esterified with α-hydroxyglutaric acid.<br />
<br />
is_a : GO:0042559 pteridine-containing compound biosynthetic process<br />
<br />
PMID : 6319137<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX79 : Tetrahydromethanopterin biosynthetic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways resulting in the formation of tetrahydromethanopterin (H4MPT), an (2S)-2-[[(2R,3S,4R,5S)-5-[(2R,3S,4S)-5-[4-[[(1R)-1-[(7S)-2-amino-7-methyl-4-oxo-5,6,7,8-tetrahydro-1H-pteridin-6-yl]ethyl]amino]phenyl]-2,3,4-trihydroxypentoxy]-3,4-dihydroxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxypentanedioic acid<br />
<br />
is_a : GO:0042559 pteridine-containing compound biosynthetic process<br />
<br />
PMID : 6547718, 15028691, 14973120<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX80 : Tetrahydromethanopterin metabolic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways involving tetrahydromethanopterin, a coenzyme involved in the biosynthesis of methane by methanogenic archaea.<br />
<br />
Is_a: GO:0006732 : coenzyme metabolic process<br />
<br />
PMID : 6547718, 2403564, 7852356, 11265475<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX81 : Methanofuran biosynthetic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways resulting in the formation of methanofuran, a 7-[[5-[[5-[2-[4-[[5-(aminomethyl)furan-3-yl]methoxy]phenyl]ethylamino]-1-hydroxy-1,5-dioxopentan-2-yl]amino]-1-hydroxy-1,5-dioxopentan-2-yl]amino]-7-oxoheptane-1,3,4-tricarboxylic acid<br />
<br />
is_a: GO:0018130 : Heterocyclic biosynthetic process<br />
<br />
PMID : 3166985, 1517208, 12013276, 3170480<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX82 : Methanofuran metabolic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways involving methanofuran, a coenzyme involved in the biosynthesis of methane by methanogenic archaea.<br />
<br />
Is_a: GO:0006732 : coenzyme metabolic process<br />
<br />
PMID : 3922409, 12102556 <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX83 : Coenzyme F420 biosynthetic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways resulting in the formation of coenzyme F420, a 2-[[5-hydroxy-4-[2-[hydroxy-[2,3,4-trihydroxy-5-(2,4,8-trioxo-1H-pyrimido[4,5-b]quinolin-10-yl)pentoxy]phosphoryl]oxypropanoylamino]-5-oxopentanoyl]amino]pentanedioic acid.<br />
<br />
is_a: GO:0042727 : flavin-containing compound biosynthetic process<br />
<br />
PMID : 11717263, 11948155, 11535063, 11888293, 12909715, 16585745, 18260642, <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX84 : Coenzyme F420-dependent metabolic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways involving coenzyme F420, a coenzyme involved in the biosynthesis of methane by methanogenic archaea and many other reaction in Bacteria and Eukarya.<br />
<br />
Is_a: GO:0006732 : coenzyme metabolic process<br />
<br />
PMID : 21038477, <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX85 : Coenzyme F420-dependent anabolic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways involving coenzyme F420, a deazaflavin derivative, in the synthesis of a molecule such as in methane biosynthesis.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 20534465<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX86 : Coenzyme F420-dependent catabolic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways involving an enzyme cofactor consisting of coenzyme F420, a deazaflavin derivative, in the degradation of a molecule such as in aflatoxin and picric acid degradations.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 20807200, 21038477, 10217752<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX87 : Coenzyme F420-dependent glucose-6-phosphate dehydrogenase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving coenzyme F420, a deazaflavin derivative, in the conversion of glucose-6-phosphate to 6-phosphogluconolactone.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 8631674, 8997717, 9555906, 18434308<br />
<br />
E.C. EC 1.1.99.34<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX88 : Coenzyme F420-dependent nitroreductase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving coenzyme F420, a deazaflavin derivative, in the conversion of <br />
a nitroimidazopyran (such as PA824, a new antituberculosis drug) to its nitronic acid derivative.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 16387854, 19039139.<br />
<br />
E.C. <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX89 : Coenzyme F420-dependent aflatoxin reductase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving coenzyme F420, a deazaflavin derivative, in the reduction of <br />
furanocumarin moiety of aflatoxin.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 20807200, 21038477<br />
<br />
E.C. 1.---<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX90 : Coenzyme F420-dependent NADP oxidoreductase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving a reduced form of coenzyme F420 (F420H2) to convert NADP+ to NADP(H). <br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 9821972, 11109487, 11726492<br />
<br />
E.C. 1.6.8.-<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX91 : Coenzyme F420-dependent deoxyribodipyrimidine photolyase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: is a DNA repair enzyme. It binds to UV-damaged DNA containing pyrimidine dimers and, upon absorbing a near-UV photon (300 to 500 nm), breaks the cyclobutane ring joining the two pyrimidines of the dimer.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 2668276, 2110564, 2282137, 9360600, <br />
<br />
E.C. 4.1.99.3<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX92 : Coenzyme F420-dependent sulfite reductase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving coenzyme F420 in the conversion of sulfite to sulfide.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 16048999, 16048999<br />
<br />
E.C. 1.--- <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX93 : Coenzyme F420H2-oxidase activity ====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction which converts a reduced form of coenzyme F420 (F420H2) to F420 in the presence of molecular oxygen.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
E.C. 1.---<br />
<br />
PMID : 15340796, 17480207<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX94 : Coenzyme F420-dependent heterodisulfide oxidoreductase activity ====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving a reduced form of coenzyme F420 (F420H2) in the reduction the heterodisulfide bond of 2-mercaptoethanesulfonate and 7-mercaptoheptanoylthreonine phosphate.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 9914308, 11607121<br />
<br />
E.C. <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX95 : Coenzyme F420-dependent 2,4,6-trinitrophenol reductase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving coenzyme F420 in the hydrogenation of 2,4,6-trinitrophenol (picric acid) generating the hydride sigma-complex of picrate and finally the dihydride complex.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 10217752, 11882715, 11995829<br />
<br />
E.C. 1.3.99.-<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX96 : F420-dependent 2,4-dinitrophenol acid reductase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving coenzyme F420 in the hydrogenation of 2,4,-dinitrophenol generating the hydride sigma-complex of 2,4-dinitrophenol.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 10217752, 11995829, 12732545<br />
<br />
E.C. 1.3.99.-<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX97 : F420 dependent secondary alcohol dehydrogenase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving coenzyme F420 in the oxidation of isopropanol to acetone with the concomitant reduction of F420 to F420H2<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 1879431, 8706724, 15016352, <br />
<br />
E.C : 1.1.99.–<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX98 : Coenzyme F390-G synthetase (GTP:coenzyme F420 guanyltransferase) activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction catalyzing the transfer of guanylyl moiety to coenzyme F420 to form 8-hydroxyguanylylated-coenzyme F420 (coenzyme F390-G).<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 7957247, 8550473, 9352911<br />
<br />
E.C. 2.7.7.–<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX99 : Coenzyme F390 hydrolase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction catalyzing the hydrolysis of 8-hydroxyguanylylated-coenzyme F420 (coenzyme F390-G) into coenzyme F420 and AMP under anaerobic condition.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 8536708, 9352911<br />
<br />
E.C : 3.1.4.-<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX100 : F420H2-dependent quinone oxidoreductase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: F420H2: quinone oxidoreductase complex catalyze the reduction of 2,3-dimethyl-1,4-naphthoquinone with the concomitant oxidation of F420H2 to F420 <br />
<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 8055920, 10971593<br />
<br />
E.C. : 1.5.5.-<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX101 : F0-dependent light harvesting activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving Fo (a non-glutamated of coenzyme F420) as a light-harvesting antenna chromophore.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 19570997<br />
<br />
E.C. <br />
<br />
[GOC:MENGO_EP]</div>
Epurwant
https://wiki.geneontology.org/index.php?title=Methane_biosynthesis&diff=36589
Methane biosynthesis
2011-08-01T15:54:08Z
<p>Epurwant: </p>
<hr />
<div>Working Group Members<br />
*<br />
*<br />
*<br />
<br />
<br />
==Endang_06/22/11==<br />
<br />
====GO:XXXXXX71 : Methanogenesis from formate====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including formic acid.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 6769911, 16346087, 2687241<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX72 : Methanogenesis from monomethylamine ====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including monomethylamine.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16346215<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX73 : Methanogenesis from dimethylamine ====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including dimethylamine.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16346215<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX73 : Methanogenesis from trimethylamine ====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including trimethylamine.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16346215<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
<br />
====GO:XXXXXX74 : Methanogenesis from dimethysulfide====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including dimethylsulfide.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16347202<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX75 : Methanogenesis from methylmercaptopropionate====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including methylmercaptopropionate.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 9371433<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX76 : Methanogenesis from methanethiol====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including methanethiol.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16347202<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX77 : Methanogenesis from carbonmonoxide====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including carbonmonoxide.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16348788, 18575848, 19191870, <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX78 : Methanopterin biosynthetic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways resulting in the formation of methanopterin, an N-[1′-(2″-amino-4″-hydroxy-7″- methyl-6″- pteridinyl)ethyl]-4-[2′,3′,4′,5′- tetrahydroxypent-1′- yl (5′→1″) O-α-ribofuranosyl-5″-phosphoric acid] aniline, in which the phosphate group is esterified with α-hydroxyglutaric acid.<br />
<br />
is_a : GO:0042559 pteridine-containing compound biosynthetic process<br />
<br />
PMID : 6319137<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX79 : Tetrahydromethanopterin biosynthetic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways resulting in the formation of tetrahydromethanopterin (H4MPT), an (2S)-2-[[(2R,3S,4R,5S)-5-[(2R,3S,4S)-5-[4-[[(1R)-1-[(7S)-2-amino-7-methyl-4-oxo-5,6,7,8-tetrahydro-1H-pteridin-6-yl]ethyl]amino]phenyl]-2,3,4-trihydroxypentoxy]-3,4-dihydroxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxypentanedioic acid<br />
<br />
is_a : GO:0042559 pteridine-containing compound biosynthetic process<br />
<br />
PMID : 6547718, 15028691, 14973120<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX80 : Tetrahydromethanopterin metabolic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways involving tetrahydromethanopterin, a coenzyme involved in the biosynthesis of methane by methanogenic archaea.<br />
<br />
Is_a: GO:0006732 : coenzyme metabolic process<br />
<br />
PMID : 6547718, 2403564, 7852356, 11265475<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX81 : Methanofuran biosynthetic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways resulting in the formation of methanofuran, a 7-[[5-[[5-[2-[4-[[5-(aminomethyl)furan-3-yl]methoxy]phenyl]ethylamino]-1-hydroxy-1,5-dioxopentan-2-yl]amino]-1-hydroxy-1,5-dioxopentan-2-yl]amino]-7-oxoheptane-1,3,4-tricarboxylic acid<br />
<br />
is_a: GO:0018130 : Heterocyclic biosynthetic process<br />
<br />
PMID : 3166985, 1517208, 12013276, 3170480<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX82 : Methanofuran metabolic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways involving methanofuran, a coenzyme involved in the biosynthesis of methane by methanogenic archaea.<br />
<br />
Is_a: GO:0006732 : coenzyme metabolic process<br />
<br />
PMID : 3922409, 12102556 <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX83 : Coenzyme F420 biosynthetic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways resulting in the formation of coenzyme F420, a 2-[[5-hydroxy-4-[2-[hydroxy-[2,3,4-trihydroxy-5-(2,4,8-trioxo-1H-pyrimido[4,5-b]quinolin-10-yl)pentoxy]phosphoryl]oxypropanoylamino]-5-oxopentanoyl]amino]pentanedioic acid.<br />
<br />
is_a: GO:0042727 : flavin-containing compound biosynthetic process<br />
<br />
PMID : 11717263, 11948155, 11535063, 11888293, 12909715, 16585745, 18260642, <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX84 : Coenzyme F420-dependent metabolic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways involving coenzyme F420, a coenzyme involved in the biosynthesis of methane by methanogenic archaea and many other reaction in Bacteria and Eukarya.<br />
<br />
Is_a: GO:0006732 : coenzyme metabolic process<br />
<br />
PMID : 21038477, <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX85 : Coenzyme F420-dependent anabolic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways involving coenzyme F420, a deazaflavin derivative, in the synthesis of a molecule such as in methane biosynthesis.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 20534465<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX86 : Coenzyme F420-dependent catabolic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways involving an enzyme cofactor consisting of coenzyme F420, a deazaflavin derivative, in the degradation of a molecule such as in aflatoxin and picric acid degradations.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 20807200, 21038477, 10217752<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX87 : Coenzyme F420-dependent glucose-6-phosphate dehydrogenase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving coenzyme F420, a deazaflavin derivative, in the conversion of glucose-6-phosphate to 6-phosphogluconolactone.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 8631674, 8997717, 9555906, 18434308<br />
<br />
E.C. EC 1.1.99.34<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX88 : Coenzyme F420-dependent nitroreductase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving coenzyme F420, a deazaflavin derivative, in the conversion of <br />
a nitroimidazopyran (such as PA824, a new antituberculosis drug) to its nitronic acid derivative.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 16387854, 19039139.<br />
<br />
E.C. <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX89 : Coenzyme F420-dependent aflatoxin reductase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving coenzyme F420, a deazaflavin derivative, in the reduction of <br />
furanocumarin moiety of aflatoxin.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 20807200, 21038477<br />
<br />
E.C. 1.---<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX90 : Coenzyme F420-dependent NADP oxidoreductase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving a reduced form of coenzyme F420 (F420H2) to convert NADP+ to NADP(H). <br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 9821972, 11109487, 11726492<br />
<br />
E.C. 1.6.8.-<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX91 : Coenzyme F420-dependent deoxyribodipyrimidine photolyase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: is a DNA repair enzyme. It binds to UV-damaged DNA containing pyrimidine dimers and, upon absorbing a near-UV photon (300 to 500 nm), breaks the cyclobutane ring joining the two pyrimidines of the dimer.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 2668276, 2110564, 2282137, 9360600, <br />
<br />
E.C. 4.1.99.3<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX92 : Coenzyme F420-dependent sulfite reductase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving coenzyme F420 in the conversion of sulfite to sulfide.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 16048999, 16048999<br />
<br />
E.C. 1.--- <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX93 : Coenzyme F420H2-oxidase activity ====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction which converts a reduced form of coenzyme F420 (F420H2) to F420 in the presence of molecular oxygen.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
E.C. 1.---<br />
<br />
PMID : 15340796, 17480207<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX94 : Coenzyme F420-dependent heterodisulfide oxidoreductase activity ====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving a reduced form of coenzyme F420 (F420H2) in the reduction the heterodisulfide bond of 2-mercaptoethanesulfonate and 7-mercaptoheptanoylthreonine phosphate.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 9914308, 11607121<br />
<br />
E.C. <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX95 : Coenzyme F420-dependent 2,4,6-trinitrophenol reductase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving coenzyme F420 in the hydrogenation of 2,4,6-trinitrophenol (picric acid) generating the hydride sigma-complex of picrate and finally the dihydride complex.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 10217752, 11882715, 11995829<br />
<br />
E.C. 1.3.99.-<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX96 : F420-dependent 2,4-dinitrophenol acid reductase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving coenzyme F420 in the hydrogenation of 2,4,-dinitrophenol generating the hydride sigma-complex of 2,4-dinitrophenol.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 10217752, 11995829, 12732545<br />
<br />
E.C. 1.3.99.-<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX97 : F420 dependent secondary alcohol dehydrogenase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving coenzyme F420 in the oxidation of isopropanol to acetone with the concomitant reduction of F420 to F420H2<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 1879431, 8706724, 15016352, <br />
<br />
E.C : 1.1.99.–<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX98 : Coenzyme F390-G synthetase (GTP:coenzyme F420 guanyltransferase) activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction catalyzing the transfer of guanylyl moiety to coenzyme F420 to form 8-hydroxyguanylylated-coenzyme F420 (coenzyme F390-G).<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 7957247, 8550473, 9352911<br />
<br />
E.C. 2.7.7.–<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX99 : Coenzyme F390 hydrolase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction catalyzing the hydrolysis of 8-hydroxyguanylylated-coenzyme F420 (coenzyme F390-G) into coenzyme F420 and AMP under anaerobic condition.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 8536708, 9352911<br />
<br />
E.C : 3.1.4.-<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX100 : F420H2-dependent quinone oxidoreductase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: F420H2: quinone oxidoreductase complex catalyze the reduction of 2,3-dimethyl-1,4-naphthoquinone with the concomitant oxidation of F420H2 to F420 <br />
<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 8055920, 10971593<br />
<br />
E.C. : 1.5.5.-<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX101 : F0-dependent light harvesting activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving Fo (a non-glutamated of coenzyme F420) as a light-harvesting antenna chromophore.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 19570997<br />
<br />
E.C. <br />
<br />
[GOC:MENGO_EP]</div>
Epurwant
https://wiki.geneontology.org/index.php?title=Methane_biosynthesis&diff=36557
Methane biosynthesis
2011-07-27T13:20:53Z
<p>Epurwant: </p>
<hr />
<div>Working Group Members<br />
*<br />
*<br />
*<br />
<br />
<br />
==Endang_06/22/11==<br />
<br />
====GO:XXXXXX71 : Methanogenesis from formate====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including formic acid.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 6769911, 16346087, 2687241<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX72 : Methanogenesis from monomethylamine ====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including monomethylamine.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16346215<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX73 : Methanogenesis from dimethylamine ====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including dimethylamine.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16346215<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX73 : Methanogenesis from trimethylamine ====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including trimethylamine.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16346215<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
<br />
====GO:XXXXXX74 : Methanogenesis from dimethysulfide====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including dimethylsulfide.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16347202<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX75 : Methanogenesis from methylmercaptopropionate====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including methylmercaptopropionate.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16347202<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX76 : Methanogenesis from methanethiol====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including methanethiol.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16347202<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX77 : Methanogenesis from carbonmonoxide====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including carbonmonoxide.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16348788, 18575848, 19191870, <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX78 : Methanopterin biosynthetic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways resulting in the formation of methanopterin, an N-[1′-(2″-amino-4″-hydroxy-7″- methyl-6″- pteridinyl)ethyl]-4-[2′,3′,4′,5′- tetrahydroxypent-1′- yl (5′→1″) O-α-ribofuranosyl-5″-phosphoric acid] aniline, in which the phosphate group is esterified with α-hydroxyglutaric acid.<br />
<br />
is_a : GO:0042559 pteridine-containing compound biosynthetic process<br />
<br />
PMID : 6319137<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX79 : Tetrahydromethanopterin biosynthetic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways resulting in the formation of tetrahydromethanopterin (H4MPT), an (2S)-2-[[(2R,3S,4R,5S)-5-[(2R,3S,4S)-5-[4-[[(1R)-1-[(7S)-2-amino-7-methyl-4-oxo-5,6,7,8-tetrahydro-1H-pteridin-6-yl]ethyl]amino]phenyl]-2,3,4-trihydroxypentoxy]-3,4-dihydroxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxypentanedioic acid<br />
<br />
is_a : GO:0042559 pteridine-containing compound biosynthetic process<br />
<br />
PMID : 6547718, 15028691, 14973120<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX80 : Tetrahydromethanopterin metabolic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways involving tetrahydromethanopterin, a coenzyme involved in the biosynthesis of methane by methanogenic archaea.<br />
<br />
Is_a: GO:0006732 : coenzyme metabolic process<br />
<br />
PMID : 6547718, 2403564, 7852356, 11265475<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX81 : Methanofuran biosynthetic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways resulting in the formation of methanofuran, a 7-[[5-[[5-[2-[4-[[5-(aminomethyl)furan-3-yl]methoxy]phenyl]ethylamino]-1-hydroxy-1,5-dioxopentan-2-yl]amino]-1-hydroxy-1,5-dioxopentan-2-yl]amino]-7-oxoheptane-1,3,4-tricarboxylic acid<br />
<br />
is_a: GO:0018130 : Heterocyclic biosynthetic process<br />
<br />
PMID : 3166985, 1517208, 12013276, 3170480<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX82 : Methanofuran metabolic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways involving methanofuran, a coenzyme involved in the biosynthesis of methane by methanogenic archaea.<br />
<br />
Is_a: GO:0006732 : coenzyme metabolic process<br />
<br />
PMID : 3922409, 12102556 <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX83 : Coenzyme F420 biosynthetic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways resulting in the formation of coenzyme F420, a 2-[[5-hydroxy-4-[2-[hydroxy-[2,3,4-trihydroxy-5-(2,4,8-trioxo-1H-pyrimido[4,5-b]quinolin-10-yl)pentoxy]phosphoryl]oxypropanoylamino]-5-oxopentanoyl]amino]pentanedioic acid.<br />
<br />
is_a: GO:0042727 : flavin-containing compound biosynthetic process<br />
<br />
PMID : 11717263, 11948155, 11535063, 11888293, 12909715, 16585745, 18260642, <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX84 : Coenzyme F420-dependent metabolic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways involving coenzyme F420, a coenzyme involved in the biosynthesis of methane by methanogenic archaea and many other reaction in Bacteria and Eukarya.<br />
<br />
Is_a: GO:0006732 : coenzyme metabolic process<br />
<br />
PMID : 21038477, <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX85 : Coenzyme F420-dependent anabolic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways involving coenzyme F420, a deazaflavin derivative, in the synthesis of a molecule such as in methane biosynthesis.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 20534465<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX86 : Coenzyme F420-dependent catabolic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways involving an enzyme cofactor consisting of coenzyme F420, a deazaflavin derivative, in the degradation of a molecule such as in aflatoxin and picric acid degradations.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 20807200, 21038477, 10217752<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX87 : Coenzyme F420-dependent glucose-6-phosphate dehydrogenase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving coenzyme F420, a deazaflavin derivative, in the conversion of glucose-6-phosphate to 6-phosphogluconolactone.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 8631674, 8997717, 9555906, 18434308<br />
<br />
E.C. EC 1.1.99.34<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX88 : Coenzyme F420-dependent nitroreductase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving coenzyme F420, a deazaflavin derivative, in the conversion of <br />
a nitroimidazopyran (such as PA824, a new antituberculosis drug) to its nitronic acid derivative.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 16387854, 19039139.<br />
<br />
E.C. <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX89 : Coenzyme F420-dependent aflatoxin reductase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving coenzyme F420, a deazaflavin derivative, in the reduction of <br />
furanocumarin moiety of aflatoxin.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 20807200, 21038477<br />
<br />
E.C. 1.---<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX90 : Coenzyme F420-dependent NADP oxidoreductase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving a reduced form of coenzyme F420 (F420H2) to convert NADP+ to NADP(H). <br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 9821972, 11109487, 11726492<br />
<br />
E.C. 1.6.8.-<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX91 : Coenzyme F420-dependent deoxyribodipyrimidine photolyase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: is a DNA repair enzyme. It binds to UV-damaged DNA containing pyrimidine dimers and, upon absorbing a near-UV photon (300 to 500 nm), breaks the cyclobutane ring joining the two pyrimidines of the dimer.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 2668276, 2110564, 2282137, 9360600, <br />
<br />
E.C. 4.1.99.3<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX92 : Coenzyme F420-dependent sulfite reductase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving coenzyme F420 in the conversion of sulfite to sulfide.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 16048999, 16048999<br />
<br />
E.C. 1.--- <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX93 : Coenzyme F420H2-oxidase activity ====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction which converts a reduced form of coenzyme F420 (F420H2) to F420 in the presence of molecular oxygen.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
E.C. 1.---<br />
<br />
PMID : 15340796, 17480207<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX94 : Coenzyme F420-dependent heterodisulfide oxidoreductase activity ====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving a reduced form of coenzyme F420 (F420H2) in the reduction the heterodisulfide bond of 2-mercaptoethanesulfonate and 7-mercaptoheptanoylthreonine phosphate.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 9914308, 11607121<br />
<br />
E.C. <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX95 : Coenzyme F420-dependent 2,4,6-trinitrophenol reductase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving coenzyme F420 in the hydrogenation of 2,4,6-trinitrophenol (picric acid) generating the hydride sigma-complex of picrate and finally the dihydride complex.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 10217752, 11882715, 11995829<br />
<br />
E.C. 1.3.99.-<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX96 : F420-dependent 2,4-dinitrophenol acid reductase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving coenzyme F420 in the hydrogenation of 2,4,-dinitrophenol generating the hydride sigma-complex of 2,4-dinitrophenol.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 10217752, 11995829, 12732545<br />
<br />
E.C. 1.3.99.-<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX97 : F420 dependent secondary alcohol dehydrogenase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving coenzyme F420 in the oxidation of isopropanol to acetone with the concomitant reduction of F420 to F420H2<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 1879431, 8706724, 15016352, <br />
<br />
E.C : 1.1.99.–<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX98 : Coenzyme F390-G synthetase (GTP:coenzyme F420 guanyltransferase) activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction catalyzing the transfer of guanylyl moiety to coenzyme F420 to form 8-hydroxyguanylylated-coenzyme F420 (coenzyme F390-G).<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 7957247, 8550473, 9352911<br />
<br />
E.C. 2.7.7.–<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX99 : Coenzyme F390 hydrolase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction catalyzing the hydrolysis of 8-hydroxyguanylylated-coenzyme F420 (coenzyme F390-G) into coenzyme F420 and AMP under anaerobic condition.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 8536708, 9352911<br />
<br />
E.C : 3.1.4.-<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX100 : F420H2-dependent quinone oxidoreductase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: F420H2: quinone oxidoreductase complex catalyze the reduction of 2,3-dimethyl-1,4-naphthoquinone with the concomitant oxidation of F420H2 to F420 <br />
<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 8055920, 10971593<br />
<br />
E.C. : 1.5.5.-<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX101 : F0-dependent light harvesting activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving Fo (a non-glutamated of coenzyme F420) as a light-harvesting antenna chromophore.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 19570997<br />
<br />
E.C. <br />
<br />
[GOC:MENGO_EP]</div>
Epurwant
https://wiki.geneontology.org/index.php?title=MENGO_Oligosaccharide_transport&diff=36362
MENGO Oligosaccharide transport
2011-07-07T17:35:32Z
<p>Epurwant: </p>
<hr />
<div>Working Group Members<br />
*<br />
*<br />
*<br />
==Endang_07/07/2011==<br />
<br />
===Disaccharide transport (GO 0015766)===<br />
<br />
namespace: biological process<br />
<br />
def: The directed movement of disaccharides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Disaccharides are sugars composed of two monosaccharide units.<br />
<br />
<br />
====GO:XXXXXX101 : Laminaribiose transport activity====<br />
<br />
namespace: biological process<br />
<br />
def: The directed movement of laminaribiose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Laminaribiose is a sugars consisting of two glucose molecules linked via beta-1,3 glycosidic bonds.<br />
<br />
part_of: GO:0015766 : disaccharide transport<br />
<br />
PMID : 11489849, 16461685, 18952792 <br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX102 : Sophorose transport activity====<br />
<br />
namespace: biological process<br />
<br />
def: The directed movement of sophorose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Sophorose is a sugars consisting of two glucose molecules (2-O-beta-D-Glucopyranosyl-alpha-D-glucose)<br />
<br />
part_of: GO:0015766 : disaccharide transport<br />
<br />
PMID : 11489849<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
===GO:XXXXXX103 : Trisaccharide transport===<br />
<br />
namespace: biological process<br />
<br />
def: The directed movement of trisaccharides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Trisaccharides are sugars composed of three monosaccharide units.<br />
<br />
part_of: GO:0015772: Oligosaccharide transport<br />
<br />
PMID : 18203856, 6754547, 8407799, 9529885<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX104 : maltotriose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of maltotriose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Maltotriose is a trisaccharide (three-part sugar) consisting of three maltose molecules linked with α-1,4 glycosidic bonds. It is most commonly produced by the enzyme alpha amylase on amylose in starch.<br />
<br />
part_of: GO:XXXXXX103 : Trisaccharide transport<br />
<br />
PMID : 8055920, 10971593<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
<br />
====GO:XXXXXX105 : maltotriulose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of maltotriose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Maltotriulose is a trisaccharide (three-part sugar) consisting of glucose, α(1→4), glucose, α(1→4), fructose.<br />
<br />
part_of: GO:XXXXXX103 : Trisaccharide transport<br />
<br />
PMID : 5690932, <br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX106 : Nigerotriose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of nigerotriose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Nigerotriose is a trisaccharide (three-part sugar) consisting of glucose with α(1→3) linkages.<br />
<br />
part_of: GO:XXXXXX103 : Trisaccharide transport<br />
<br />
PMID : 17496125<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX107 : Arabinotriose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of arabinotriose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Arabinotriose is a trisaccharide (three-part sugar) consisting of arabinose via alpha-1,5 linkages.<br />
<br />
part_of: GO:XXXXXX103 : Trisaccharide transport<br />
<br />
PMID : 20693325<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX108 : Galactotriose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of galactotriose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Galactotriose is a trisaccharide (three-part sugar) consisting of galactose via α-(1→3)-β-(1→4) linkages.<br />
<br />
part_of: GO:XXXXXX103 : Trisaccharide transport<br />
<br />
PMID : 17644603<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX109 : Xylotriose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of xylotriose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Xylotriose is a trisaccharide (three-part sugar) consisting of Xylose via 1,4-β-D linkages.<br />
<br />
part_of: GO:XXXXXX103 : Trisaccharide transport<br />
<br />
PMID : 17142383, 16461685<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX110 : Mannotriose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of mannotriose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Mannotriose is a trisaccharide (three-part sugar) consisting of mannose via beta-(1,4) linkages.<br />
<br />
part_of: GO:XXXXXX103 : Trisaccharide transport<br />
<br />
PMID : 16461685<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX111 : Cellotriose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of cellotriose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Cellotriose is a trisaccharide (three-part sugar) consisting of glucose via beta-(1,4) linkages.<br />
<br />
part_of: GO:XXXXXX103 : Trisaccharide transport<br />
<br />
PMID : 8973652, 10347054, 10981702, <br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX112 : Laminaritriose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of laminaritriose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Laminaritriose is a sugars consisting of three glucose molecules linked with beta-1,3 glycosidic bonds.<br />
<br />
part_of: GO:XXXXXX113 : Trisaccharide transport<br />
<br />
PMID : 11489849<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
===GO:XXXXXX113 : Tetrasaccharide transport===<br />
<br />
namespace: biological process<br />
<br />
def: The directed movement of tetrasaccharides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Tetrasaccharides are sugars composed of four monosaccharide units.<br />
<br />
part_of: GO:0015772 : Oligosaccharide transport<br />
<br />
PMID : 16461685, 17965163, 9529885 <br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX114 : maltotetraose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of maltotetraose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Maltotetraose is a tetrasaccharide (four-part sugar) consisting of three maltose molecules linked with α-1,4 glycosidic linkages. <br />
<br />
part_of: GO:XXXXXX113 : Tetrasaccharide transport<br />
<br />
PMID : 9211909, 16321936, 17965163. <br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX115 : Arabinotetraose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of arabinotetraose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Arabinotetraose is a tetrasaccharide (four-part sugar) consisting of arabinose via alpha-1,5 linkages.<br />
<br />
part_of: GO:XXXXXX113 : Tetrasaccharide transport<br />
<br />
PMID : 20693325<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX116 : Galactotetraose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of galactotetraose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Galactotetraose is a tetrasaccharide (four-part sugar) consisting of galactose via α-(1→3)-β-(1→4) linkages.<br />
<br />
part_of: GO:XXXXXX113 : Tetrasaccharide transport<br />
<br />
PMID : 17644603<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX117 : Xylotetraose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of xylotetraose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Xylotetraose is a tetrasaccharide (four-part sugar) consisting of Xylose via 1,4-β-D linkages.<br />
<br />
part_of: GO:XXXXXX113 : Tetrasaccharide transport<br />
<br />
PMID : 17142383<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX118 : Mannotetraose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of mannotetraose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Mannotetraose is a tetrasaccharide (four-part sugar) consisting of mannose via beta-(1,4) linkages.<br />
<br />
part_of: GO:XXXXXX113 : Tetrasaccharide transport<br />
<br />
PMID : 16461685<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX119 : Cellotetraose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of cellotetraose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Cellotetraose is a tetrasaccharide (four-part sugar) consisting of glucose via beta-(1,4) linkages.<br />
<br />
part_of: GO:XXXXXX113 : Tetrasaccharide transport<br />
<br />
PMID : 11489849<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
===GO:XXXXXX120 : Pentasaccharide transport===<br />
<br />
namespace: biological process<br />
<br />
def: The directed movement of pentasaccharides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Pentasaccharides are sugars composed of five monosaccharide units.<br />
<br />
part_of: GO:0015772 : Oligosaccharide transport<br />
<br />
PMID : 12749343, 12700069, <br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX121 : Maltopentaose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of maltopentaose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Maltopentaose is a pentasaccharide (five-part sugar) consisting of three maltose molecules linked with α-1,4 glycosidic linkages. <br />
<br />
part_of: GO:XXXXXX120 : Pentasaccharide transport<br />
<br />
PMID : 12700069, 16321934<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX122 : Galactopentaose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of galactopentaose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Galactopentaose is a pentasaccharide (five-part sugar) consisting of galactose via α-(1→3)-β-(1→4) linkages.<br />
<br />
part_of: GO:XXXXXX120 : Pentasaccharide transport<br />
<br />
PMID : 17644603<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX123 : Cellopentaose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of cellopentaose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Cellopentaose is a pentasaccharide (Five-part sugar) consisting of glucose via beta-(1,4) linkages.<br />
<br />
part_of: GO:XXXXXX120 : Pentasaccharide transport<br />
<br />
PMID : 11489849<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
<br />
===GO:XXXXXX124 : Hexasaccharide transport===<br />
<br />
namespace: biological process<br />
<br />
def: The directed movement of hexasaccharides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Hexasaccharides are sugars composed of six monosaccharide units.<br />
<br />
part_of: GO:0015772 : Oligosaccharide transport<br />
<br />
PMID : 8805519, 9573146, 12003940, 17644603<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX125 : Maltohexaose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of maltohexaose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Maltohexaose is a hexasaccharide (six-part sugar) consisting of six maltose molecules joined with α-1,4 glycosidic linkages. <br />
<br />
part_of: GO:XXXXXX124 : Hexasaccharide transport<br />
<br />
PMID : 8805519, 9573146, 12003940, 11806922 <br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX126 : Galactohexaose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of galactohexaose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Galactohexaose is a hexasaccharide (six-part sugar) consisting of galactose via α-(1→3)-β-(1→4) linkages.<br />
<br />
part_of: GO:XXXXXX124 : Hexasaccharide transport<br />
<br />
PMID : 17644603<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
===GO:XXXXXX127 : Heptasaccharide transport===<br />
<br />
namespace: biological process<br />
<br />
def: The directed movement of heptasaccharides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Heptasaccharides are sugars composed of seven monosaccharide units.<br />
<br />
part_of: GO:0015772 : Oligosaccharide transport<br />
<br />
PMID : <br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX128 : Maltoheptaose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of maltoheptaose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Maltoheptaose is a heptasaccharide (seven-part sugar) consisting of seven maltose molecules joined by α-1,4 glycosidic linkages. <br />
<br />
part_of: GO:XXXXXX127 : Heptasaccharide transport<br />
<br />
PMID : 11806922<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]</div>
Epurwant
https://wiki.geneontology.org/index.php?title=MENGO_Oligosaccharide_transport&diff=36361
MENGO Oligosaccharide transport
2011-07-07T17:33:25Z
<p>Epurwant: </p>
<hr />
<div>Working Group Members<br />
*<br />
*<br />
*<br />
==Endang_07/07/2011==<br />
<br />
===Disaccharide transport (GO 0015766)===<br />
<br />
namespace: biological process<br />
<br />
def: The directed movement of disaccharides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Disaccharides are sugars composed of two monosaccharide units.<br />
<br />
<br />
====GO:XXXXXX101 : Laminaribiose transport activity====<br />
<br />
namespace: biological process<br />
<br />
def: The directed movement of laminaribiose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Laminaribiose is a sugars consisting of two glucose molecules linked via beta-1,3 glycosidic bonds.<br />
<br />
part_of: GO:0015766 : disaccharide transport<br />
<br />
PMID : 11489849, 16461685, 18952792 <br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX102 : Sophorose transport activity====<br />
<br />
namespace: biological process<br />
<br />
def: The directed movement of sophorose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Sophorose is a sugars consisting of two glucose molecules (2-O-beta-D-Glucopyranosyl-alpha-D-glucose)<br />
<br />
part_of: GO:0015766 : disaccharide transport<br />
<br />
PMID : 11489849<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX103 : Trisaccharide transport====<br />
<br />
namespace: biological process<br />
<br />
def: The directed movement of trisaccharides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Trisaccharides are sugars composed of three monosaccharide units.<br />
<br />
part_of: GO:0015772: Oligosaccharide transport<br />
<br />
PMID : 18203856, 6754547, 8407799, 9529885<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX104 : maltotriose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of maltotriose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Maltotriose is a trisaccharide (three-part sugar) consisting of three maltose molecules linked with α-1,4 glycosidic bonds. It is most commonly produced by the enzyme alpha amylase on amylose in starch.<br />
<br />
part_of: GO:XXXXXX103 : Trisaccharide transport<br />
<br />
PMID : 8055920, 10971593<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
<br />
====GO:XXXXXX105 : maltotriulose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of maltotriose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Maltotriulose is a trisaccharide (three-part sugar) consisting of glucose, α(1→4), glucose, α(1→4), fructose.<br />
<br />
part_of: GO:XXXXXX103 : Trisaccharide transport<br />
<br />
PMID : 5690932, <br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX106 : Nigerotriose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of nigerotriose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Nigerotriose is a trisaccharide (three-part sugar) consisting of glucose with α(1→3) linkages.<br />
<br />
part_of: GO:XXXXXX103 : Trisaccharide transport<br />
<br />
PMID : 17496125<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX107 : Arabinotriose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of arabinotriose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Arabinotriose is a trisaccharide (three-part sugar) consisting of arabinose via alpha-1,5 linkages.<br />
<br />
part_of: GO:XXXXXX103 : Trisaccharide transport<br />
<br />
PMID : 20693325<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX108 : Galactotriose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of galactotriose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Galactotriose is a trisaccharide (three-part sugar) consisting of galactose via α-(1→3)-β-(1→4) linkages.<br />
<br />
part_of: GO:XXXXXX103 : Trisaccharide transport<br />
<br />
PMID : 17644603<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX109 : Xylotriose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of xylotriose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Xylotriose is a trisaccharide (three-part sugar) consisting of Xylose via 1,4-β-D linkages.<br />
<br />
part_of: GO:XXXXXX103 : Trisaccharide transport<br />
<br />
PMID : 17142383, 16461685<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX110 : Mannotriose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of mannotriose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Mannotriose is a trisaccharide (three-part sugar) consisting of mannose via beta-(1,4) linkages.<br />
<br />
part_of: GO:XXXXXX103 : Trisaccharide transport<br />
<br />
PMID : 16461685<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX111 : Cellotriose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of cellotriose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Cellotriose is a trisaccharide (three-part sugar) consisting of glucose via beta-(1,4) linkages.<br />
<br />
part_of: GO:XXXXXX103 : Trisaccharide transport<br />
<br />
PMID : 8973652, 10347054, 10981702, <br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX112 : Laminaritriose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of laminaritriose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Laminaritriose is a sugars consisting of three glucose molecules linked with beta-1,3 glycosidic bonds.<br />
<br />
part_of: GO:XXXXXX113 : Trisaccharide transport<br />
<br />
PMID : 11489849<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX113 : Tetrasaccharide transport====<br />
<br />
namespace: biological process<br />
<br />
def: The directed movement of tetrasaccharides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Tetrasaccharides are sugars composed of four monosaccharide units.<br />
<br />
part_of: GO:0015772 : Oligosaccharide transport<br />
<br />
PMID : 16461685, 17965163, 9529885 <br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX114 : maltotetraose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of maltotetraose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Maltotetraose is a tetrasaccharide (four-part sugar) consisting of three maltose molecules linked with α-1,4 glycosidic linkages. <br />
<br />
part_of: GO:XXXXXX113 : Tetrasaccharide transport<br />
<br />
PMID : 9211909, 16321936, 17965163. <br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX115 : Arabinotetraose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of arabinotetraose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Arabinotetraose is a tetrasaccharide (four-part sugar) consisting of arabinose via alpha-1,5 linkages.<br />
<br />
part_of: GO:XXXXXX113 : Tetrasaccharide transport<br />
<br />
PMID : 20693325<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX116 : Galactotetraose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of galactotetraose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Galactotetraose is a tetrasaccharide (four-part sugar) consisting of galactose via α-(1→3)-β-(1→4) linkages.<br />
<br />
part_of: GO:XXXXXX113 : Tetrasaccharide transport<br />
<br />
PMID : 17644603<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX117 : Xylotetraose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of xylotetraose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Xylotetraose is a tetrasaccharide (four-part sugar) consisting of Xylose via 1,4-β-D linkages.<br />
<br />
part_of: GO:XXXXXX113 : Tetrasaccharide transport<br />
<br />
PMID : 17142383<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX118 : Mannotetraose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of mannotetraose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Mannotetraose is a tetrasaccharide (four-part sugar) consisting of mannose via beta-(1,4) linkages.<br />
<br />
part_of: GO:XXXXXX113 : Tetrasaccharide transport<br />
<br />
PMID : 16461685<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX119 : Cellotetraose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of cellotetraose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Cellotetraose is a tetrasaccharide (four-part sugar) consisting of glucose via beta-(1,4) linkages.<br />
<br />
part_of: GO:XXXXXX113 : Tetrasaccharide transport<br />
<br />
PMID : 11489849<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX120 : Pentasaccharide transport====<br />
<br />
namespace: biological process<br />
<br />
def: The directed movement of pentasaccharides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Pentasaccharides are sugars composed of five monosaccharide units.<br />
<br />
part_of: GO:0015772 : Oligosaccharide transport<br />
<br />
PMID : 12749343, 12700069, <br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX121 : Maltopentaose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of maltopentaose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Maltopentaose is a pentasaccharide (five-part sugar) consisting of three maltose molecules linked with α-1,4 glycosidic linkages. <br />
<br />
part_of: GO:XXXXXX120 : Pentasaccharide transport<br />
<br />
PMID : 12700069, 16321934<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX122 : Galactopentaose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of galactopentaose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Galactopentaose is a pentasaccharide (five-part sugar) consisting of galactose via α-(1→3)-β-(1→4) linkages.<br />
<br />
part_of: GO:XXXXXX120 : Pentasaccharide transport<br />
<br />
PMID : 17644603<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX123 : Cellopentaose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of cellopentaose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Cellopentaose is a pentasaccharide (Five-part sugar) consisting of glucose via beta-(1,4) linkages.<br />
<br />
part_of: GO:XXXXXX120 : Pentasaccharide transport<br />
<br />
PMID : 11489849<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
<br />
====GO:XXXXXX124 : Hexasaccharide transport====<br />
<br />
namespace: biological process<br />
<br />
def: The directed movement of hexasaccharides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Hexasaccharides are sugars composed of six monosaccharide units.<br />
<br />
part_of: GO:0015772 : Oligosaccharide transport<br />
<br />
PMID : 8805519, 9573146, 12003940, 17644603<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX125 : Maltohexaose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of maltohexaose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Maltohexaose is a hexasaccharide (six-part sugar) consisting of six maltose molecules joined with α-1,4 glycosidic linkages. <br />
<br />
part_of: GO:XXXXXX124 : Hexasaccharide transport<br />
<br />
PMID : 8805519, 9573146, 12003940, 11806922 <br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX126 : Galactohexaose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of galactohexaose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Galactohexaose is a hexasaccharide (six-part sugar) consisting of galactose via α-(1→3)-β-(1→4) linkages.<br />
<br />
part_of: GO:XXXXXX124 : Hexasaccharide transport<br />
<br />
PMID : 17644603<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX127 : Heptasaccharide transport====<br />
<br />
namespace: biological process<br />
<br />
def: The directed movement of heptasaccharides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Heptasaccharides are sugars composed of seven monosaccharide units.<br />
<br />
part_of: GO:0015772 : Oligosaccharide transport<br />
<br />
PMID : <br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX128 : Maltoheptaose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of maltoheptaose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Maltoheptaose is a heptasaccharide (seven-part sugar) consisting of seven maltose molecules joined by α-1,4 glycosidic linkages. <br />
<br />
part_of: GO:XXXXXX127 : Heptasaccharide transport<br />
<br />
PMID : 11806922<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]</div>
Epurwant
https://wiki.geneontology.org/index.php?title=MENGO_Oligosaccharide_transport&diff=36360
MENGO Oligosaccharide transport
2011-07-07T17:32:15Z
<p>Epurwant: Created page with "Working Group Members * * * ==Endang_07/07/2011== Disaccharide transport (GO 0015766) namespace: biological process def: The directed movement of disaccharides into, out of o..."</p>
<hr />
<div>Working Group Members<br />
*<br />
*<br />
*<br />
==Endang_07/07/2011==<br />
<br />
Disaccharide transport (GO 0015766)<br />
<br />
namespace: biological process<br />
<br />
def: The directed movement of disaccharides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Disaccharides are sugars composed of two monosaccharide units.<br />
<br />
<br />
====GO:XXXXXX101 : Laminaribiose transport activity====<br />
<br />
namespace: biological process<br />
<br />
def: The directed movement of laminaribiose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Laminaribiose is a sugars consisting of two glucose molecules linked via beta-1,3 glycosidic bonds.<br />
<br />
part_of: GO:0015766 : disaccharide transport<br />
<br />
PMID : 11489849, 16461685, 18952792 <br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX102 : Sophorose transport activity====<br />
<br />
namespace: biological process<br />
<br />
def: The directed movement of sophorose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Sophorose is a sugars consisting of two glucose molecules (2-O-beta-D-Glucopyranosyl-alpha-D-glucose)<br />
<br />
part_of: GO:0015766 : disaccharide transport<br />
<br />
PMID : 11489849<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX103 : Trisaccharide transport====<br />
<br />
namespace: biological process<br />
<br />
def: The directed movement of trisaccharides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Trisaccharides are sugars composed of three monosaccharide units.<br />
<br />
part_of: GO:0015772: Oligosaccharide transport<br />
<br />
PMID : 18203856, 6754547, 8407799, 9529885<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX104 : maltotriose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of maltotriose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Maltotriose is a trisaccharide (three-part sugar) consisting of three maltose molecules linked with α-1,4 glycosidic bonds. It is most commonly produced by the enzyme alpha amylase on amylose in starch.<br />
<br />
part_of: GO:XXXXXX103 : Trisaccharide transport<br />
<br />
PMID : 8055920, 10971593<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
<br />
====GO:XXXXXX105 : maltotriulose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of maltotriose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Maltotriulose is a trisaccharide (three-part sugar) consisting of glucose, α(1→4), glucose, α(1→4), fructose.<br />
<br />
part_of: GO:XXXXXX103 : Trisaccharide transport<br />
<br />
PMID : 5690932, <br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX106 : Nigerotriose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of nigerotriose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Nigerotriose is a trisaccharide (three-part sugar) consisting of glucose with α(1→3) linkages.<br />
<br />
part_of: GO:XXXXXX103 : Trisaccharide transport<br />
<br />
PMID : 17496125<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX107 : Arabinotriose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of arabinotriose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Arabinotriose is a trisaccharide (three-part sugar) consisting of arabinose via alpha-1,5 linkages.<br />
<br />
part_of: GO:XXXXXX103 : Trisaccharide transport<br />
<br />
PMID : 20693325<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX108 : Galactotriose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of galactotriose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Galactotriose is a trisaccharide (three-part sugar) consisting of galactose via α-(1→3)-β-(1→4) linkages.<br />
<br />
part_of: GO:XXXXXX103 : Trisaccharide transport<br />
<br />
PMID : 17644603<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX109 : Xylotriose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of xylotriose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Xylotriose is a trisaccharide (three-part sugar) consisting of Xylose via 1,4-β-D linkages.<br />
<br />
part_of: GO:XXXXXX103 : Trisaccharide transport<br />
<br />
PMID : 17142383, 16461685<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX110 : Mannotriose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of mannotriose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Mannotriose is a trisaccharide (three-part sugar) consisting of mannose via beta-(1,4) linkages.<br />
<br />
part_of: GO:XXXXXX103 : Trisaccharide transport<br />
<br />
PMID : 16461685<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX111 : Cellotriose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of cellotriose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Cellotriose is a trisaccharide (three-part sugar) consisting of glucose via beta-(1,4) linkages.<br />
<br />
part_of: GO:XXXXXX103 : Trisaccharide transport<br />
<br />
PMID : 8973652, 10347054, 10981702, <br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX112 : Laminaritriose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of laminaritriose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Laminaritriose is a sugars consisting of three glucose molecules linked with beta-1,3 glycosidic bonds.<br />
<br />
part_of: GO:XXXXXX113 : Trisaccharide transport<br />
<br />
PMID : 11489849<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX113 : Tetrasaccharide transport====<br />
<br />
namespace: biological process<br />
<br />
def: The directed movement of tetrasaccharides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Tetrasaccharides are sugars composed of four monosaccharide units.<br />
<br />
part_of: GO:0015772 : Oligosaccharide transport<br />
<br />
PMID : 16461685, 17965163, 9529885 <br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX114 : maltotetraose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of maltotetraose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Maltotetraose is a tetrasaccharide (four-part sugar) consisting of three maltose molecules linked with α-1,4 glycosidic linkages. <br />
<br />
part_of: GO:XXXXXX113 : Tetrasaccharide transport<br />
<br />
PMID : 9211909, 16321936, 17965163. <br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX115 : Arabinotetraose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of arabinotetraose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Arabinotetraose is a tetrasaccharide (four-part sugar) consisting of arabinose via alpha-1,5 linkages.<br />
<br />
part_of: GO:XXXXXX113 : Tetrasaccharide transport<br />
<br />
PMID : 20693325<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX116 : Galactotetraose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of galactotetraose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Galactotetraose is a tetrasaccharide (four-part sugar) consisting of galactose via α-(1→3)-β-(1→4) linkages.<br />
<br />
part_of: GO:XXXXXX113 : Tetrasaccharide transport<br />
<br />
PMID : 17644603<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX117 : Xylotetraose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of xylotetraose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Xylotetraose is a tetrasaccharide (four-part sugar) consisting of Xylose via 1,4-β-D linkages.<br />
<br />
part_of: GO:XXXXXX113 : Tetrasaccharide transport<br />
<br />
PMID : 17142383<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX118 : Mannotetraose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of mannotetraose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Mannotetraose is a tetrasaccharide (four-part sugar) consisting of mannose via beta-(1,4) linkages.<br />
<br />
part_of: GO:XXXXXX113 : Tetrasaccharide transport<br />
<br />
PMID : 16461685<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX119 : Cellotetraose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of cellotetraose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Cellotetraose is a tetrasaccharide (four-part sugar) consisting of glucose via beta-(1,4) linkages.<br />
<br />
part_of: GO:XXXXXX113 : Tetrasaccharide transport<br />
<br />
PMID : 11489849<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX120 : Pentasaccharide transport====<br />
<br />
namespace: biological process<br />
<br />
def: The directed movement of pentasaccharides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Pentasaccharides are sugars composed of five monosaccharide units.<br />
<br />
part_of: GO:0015772 : Oligosaccharide transport<br />
<br />
PMID : 12749343, 12700069, <br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX121 : Maltopentaose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of maltopentaose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Maltopentaose is a pentasaccharide (five-part sugar) consisting of three maltose molecules linked with α-1,4 glycosidic linkages. <br />
<br />
part_of: GO:XXXXXX120 : Pentasaccharide transport<br />
<br />
PMID : 12700069, 16321934<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX122 : Galactopentaose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of galactopentaose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Galactopentaose is a pentasaccharide (five-part sugar) consisting of galactose via α-(1→3)-β-(1→4) linkages.<br />
<br />
part_of: GO:XXXXXX120 : Pentasaccharide transport<br />
<br />
PMID : 17644603<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX123 : Cellopentaose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of cellopentaose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Cellopentaose is a pentasaccharide (Five-part sugar) consisting of glucose via beta-(1,4) linkages.<br />
<br />
part_of: GO:XXXXXX120 : Pentasaccharide transport<br />
<br />
PMID : 11489849<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
<br />
====GO:XXXXXX124 : Hexasaccharide transport====<br />
<br />
namespace: biological process<br />
<br />
def: The directed movement of hexasaccharides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Hexasaccharides are sugars composed of six monosaccharide units.<br />
<br />
part_of: GO:0015772 : Oligosaccharide transport<br />
<br />
PMID : 8805519, 9573146, 12003940, 17644603<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX125 : Maltohexaose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of maltohexaose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Maltohexaose is a hexasaccharide (six-part sugar) consisting of six maltose molecules joined with α-1,4 glycosidic linkages. <br />
<br />
part_of: GO:XXXXXX124 : Hexasaccharide transport<br />
<br />
PMID : 8805519, 9573146, 12003940, 11806922 <br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX126 : Galactohexaose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of galactohexaose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Galactohexaose is a hexasaccharide (six-part sugar) consisting of galactose via α-(1→3)-β-(1→4) linkages.<br />
<br />
part_of: GO:XXXXXX124 : Hexasaccharide transport<br />
<br />
PMID : 17644603<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX127 : Heptasaccharide transport====<br />
<br />
namespace: biological process<br />
<br />
def: The directed movement of heptasaccharides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Heptasaccharides are sugars composed of seven monosaccharide units.<br />
<br />
part_of: GO:0015772 : Oligosaccharide transport<br />
<br />
PMID : <br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX128 : Maltoheptaose transport activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: The directed movement of maltoheptaose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Maltoheptaose is a heptasaccharide (seven-part sugar) consisting of seven maltose molecules joined by α-1,4 glycosidic linkages. <br />
<br />
part_of: GO:XXXXXX127 : Heptasaccharide transport<br />
<br />
PMID : 11806922<br />
<br />
E.C. : <br />
<br />
[GOC:MENGO_EP]</div>
Epurwant
https://wiki.geneontology.org/index.php?title=Category:Content_MENGO&diff=36359
Category:Content MENGO
2011-07-07T17:30:03Z
<p>Epurwant: </p>
<hr />
<div>This category is reserved for content pertaining to the Microbial Energy Processes Ontology project, aka MENGO.<br />
<br />
===Using the MENGO wiki===<br />
To access the MENGO wiki:<br />
Go to: http://wiki.geneontology.org/index.php/Category:Content_MENGO<br />
Simply create a new account (clickable on top right corner of page).<br />
Confirmation will be sent to your e-mail. Make sure you reply to be given access to the wiki.<br />
Once on : : http://wiki.geneontology.org/index.php/Category:Content_MENGO<br />
Log on (clickable on top right corner of page)<br />
On category page, click on any topic of interest<br />
click on edit <br />
Type: ==name date== <br />
Post your contribution <br />
Be sure to click on "save page"<br />
Useful Links:<br />
Help pages for using wikis: http://meta.wikimedia.org/wiki/Help:Help ;<br />
Quick guide to formatting wiki text: http://meta.wikimedia.org/wiki/Help:Wikitext<br />
<br />
===Topic list:===<br />
*[[MENGO Microbial Energy Processes Term Development | Microbial Energy Processes Term Development]]<br />
**[[MENGO Microbial Biomass Deconstruction | Microbial Biomass Deconstruction]]<br />
***[[MENGO Cellulosome | Cellulosome]]<br />
***[[MENGO Starch utilization System | Starch Utilization System]]<br />
***[[MENGO Carbohydrate binding | Carbohydrate binding]]<br />
***[[MENGO Oligosaccharide transport | Oligosaccharide transport]]<br />
***[[MENGO Enzyme activity | Enzyme activity]]<br />
***[[MENGO Lignin degradation | Lignin degradation]]<br />
**[[MENGO Alcohol biosynthesis | Alcohol biosynthesis]]<br />
***[[MENGO Ethanol biosynthesis| Ethanol biosynthesis]]<br />
***[[MENGO Butanol biosynthesis| Butanol biosynthesis]]<br />
***[[MENGO Isobutanol biosynthesis | Isobutanol biosynthesis]]<br />
**[[MENGO Alkane biosynthesis | Alkane biosynthesis]]<br />
**[[MENGO Fatty Acid Ester biosynthesis | Fatty Acid Ester biosynthesis]]<br />
***[[MENGO Fatty Acid Methyl Ester (FAME) biosynthesis| Fatty Acid Methyl Ester (FAME) biosynthesis]]<br />
***[[MENGO Fatty Acid Ethyl Ester (FAEE) biosynthesis| Fatty Acid Ethyl Ester (FAEE) biosynthesis]]<br />
**[[MENGO Hydrogen biosynthesis | Hydrogen biosynthesis]]<br />
**[[Methane biosynthesis| Methane biosynthesis]]<br />
**[[MENGO Central Metabolism | Central Metabolism]]<br />
**[[MENGO Protein Structure | Protein Structure]]<br />
**[[MENGO Synthetic Biology | Synthetic Biology]]<br />
**[[MENGO Adding Synonyms | Adding Synonyms]]<br />
**[[MENGO Fixes | Fixes]]<br />
**[[REFERENCES | REFERENCES]]</div>
Epurwant
https://wiki.geneontology.org/index.php?title=Methane_biosynthesis&diff=36233
Methane biosynthesis
2011-06-29T13:17:11Z
<p>Epurwant: </p>
<hr />
<div>Working Group Members<br />
*<br />
*<br />
*<br />
<br />
<br />
==Endang_06/22/11==<br />
<br />
====GO:XXXXXX71 : Methanogenesis from formate====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including formic acid.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 6769911, 16346087, 2687241<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX72 : Methanogenesis from monomethylamine ====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including monomethylamine.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16346215<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX73 : Methanogenesis from dimethylamine ====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including dimethylamine.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16346215<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX73 : Methanogenesis from trimethylamine ====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including trimethylamine.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16346215<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
<br />
====GO:XXXXXX74 : Methanogenesis from dimethysulfide====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including dimethylsulfide.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16347202<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
<br />
====GO:XXXXXX75 : Methanogenesis from dimethydisulfide====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including dimethyldisulfide.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16347202<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX76 : Methanogenesis from methanethiol====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including methanethiol.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16347202<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX77 : Methanogenesis from carbonmonoxide====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including carbonmonoxide.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16348788, 18575848, 19191870, <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX78 : Methanopterin biosynthetic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways resulting in the formation of methanopterin, an N-[1′-(2″-amino-4″-hydroxy-7″- methyl-6″- pteridinyl)ethyl]-4-[2′,3′,4′,5′- tetrahydroxypent-1′- yl (5′→1″) O-α-ribofuranosyl-5″-phosphoric acid] aniline, in which the phosphate group is esterified with α-hydroxyglutaric acid.<br />
<br />
is_a : GO:0042559 pteridine-containing compound biosynthetic process<br />
<br />
PMID : 6319137<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX79 : Tetrahydromethanopterin biosynthetic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways resulting in the formation of tetrahydromethanopterin (H4MPT), an (2S)-2-[[(2R,3S,4R,5S)-5-[(2R,3S,4S)-5-[4-[[(1R)-1-[(7S)-2-amino-7-methyl-4-oxo-5,6,7,8-tetrahydro-1H-pteridin-6-yl]ethyl]amino]phenyl]-2,3,4-trihydroxypentoxy]-3,4-dihydroxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxypentanedioic acid<br />
<br />
is_a : GO:0042559 pteridine-containing compound biosynthetic process<br />
<br />
PMID : 6547718, 15028691, 14973120<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX80 : Tetrahydromethanopterin metabolic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways involving tetrahydromethanopterin, a coenzyme involved in the biosynthesis of methane by methanogenic archaea.<br />
<br />
Is_a: GO:0006732 : coenzyme metabolic process<br />
<br />
PMID : 6547718, 2403564, 7852356, 11265475<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX81 : Methanofuran biosynthetic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways resulting in the formation of methanofuran, a 7-[[5-[[5-[2-[4-[[5-(aminomethyl)furan-3-yl]methoxy]phenyl]ethylamino]-1-hydroxy-1,5-dioxopentan-2-yl]amino]-1-hydroxy-1,5-dioxopentan-2-yl]amino]-7-oxoheptane-1,3,4-tricarboxylic acid<br />
<br />
is_a: GO:0018130 : Heterocyclic biosynthetic process<br />
<br />
PMID : 3166985, 1517208, 12013276, 3170480<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX82 : Methanofuran metabolic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways involving methanofuran, a coenzyme involved in the biosynthesis of methane by methanogenic archaea.<br />
<br />
Is_a: GO:0006732 : coenzyme metabolic process<br />
<br />
PMID : 3922409, 12102556 <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX83 : Coenzyme F420 biosynthetic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways resulting in the formation of coenzyme F420, a 2-[[5-hydroxy-4-[2-[hydroxy-[2,3,4-trihydroxy-5-(2,4,8-trioxo-1H-pyrimido[4,5-b]quinolin-10-yl)pentoxy]phosphoryl]oxypropanoylamino]-5-oxopentanoyl]amino]pentanedioic acid.<br />
<br />
is_a: GO:0042727 : flavin-containing compound biosynthetic process<br />
<br />
PMID : 11717263, 11948155, 11535063, 11888293, 12909715, 16585745, 18260642, <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX84 : Coenzyme F420-dependent metabolic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways involving coenzyme F420, a coenzyme involved in the biosynthesis of methane by methanogenic archaea and many other reaction in Bacteria and Eukarya.<br />
<br />
Is_a: GO:0006732 : coenzyme metabolic process<br />
<br />
PMID : 21038477, <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX85 : Coenzyme F420-dependent anabolic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways involving coenzyme F420, a deazaflavin derivative, in the synthesis of a molecule such as in methane biosynthesis.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 20534465<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX86 : Coenzyme F420-dependent catabolic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways involving an enzyme cofactor consisting of coenzyme F420, a deazaflavin derivative, in the degradation of a molecule such as in aflatoxin and picric acid degradations.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 20807200, 21038477, 10217752<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX87 : Coenzyme F420-dependent glucose-6-phosphate dehydrogenase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving coenzyme F420, a deazaflavin derivative, in the conversion of glucose-6-phosphate to 6-phosphogluconolactone.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 8631674, 8997717, 9555906, 18434308<br />
<br />
E.C. EC 1.1.99.34<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX88 : Coenzyme F420-dependent nitroreductase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving coenzyme F420, a deazaflavin derivative, in the conversion of <br />
a nitroimidazopyran (such as PA824, a new antituberculosis drug) to its nitronic acid derivative.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 16387854, 19039139.<br />
<br />
E.C. <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX89 : Coenzyme F420-dependent aflatoxin reductase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving coenzyme F420, a deazaflavin derivative, in the reduction of <br />
furanocumarin moiety of aflatoxin.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 20807200, 21038477<br />
<br />
E.C. 1.---<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX90 : Coenzyme F420-dependent NADP oxidoreductase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving a reduced form of coenzyme F420 (F420H2) to convert NADP+ to NADP(H). <br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 9821972, 11109487, 11726492<br />
<br />
E.C. 1.6.8.-<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX91 : Coenzyme F420-dependent deoxyribodipyrimidine photolyase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: is a DNA repair enzyme. It binds to UV-damaged DNA containing pyrimidine dimers and, upon absorbing a near-UV photon (300 to 500 nm), breaks the cyclobutane ring joining the two pyrimidines of the dimer.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 2668276, 2110564, 2282137, 9360600, <br />
<br />
E.C. 4.1.99.3<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX92 : Coenzyme F420-dependent sulfite reductase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving coenzyme F420 in the conversion of sulfite to sulfide.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 16048999, 16048999<br />
<br />
E.C. 1.--- <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX93 : Coenzyme F420H2-oxidase activity ====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction which converts a reduced form of coenzyme F420 (F420H2) to F420 in the presence of molecular oxygen.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
E.C. 1.---<br />
<br />
PMID : 15340796, 17480207<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX94 : Coenzyme F420-dependent heterodisulfide oxidoreductase activity ====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving a reduced form of coenzyme F420 (F420H2) in the reduction the heterodisulfide bond of 2-mercaptoethanesulfonate and 7-mercaptoheptanoylthreonine phosphate.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 9914308, 11607121<br />
<br />
E.C. <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX95 : Coenzyme F420-dependent 2,4,6-trinitrophenol reductase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving coenzyme F420 in the hydrogenation of 2,4,6-trinitrophenol (picric acid) generating the hydride sigma-complex of picrate and finally the dihydride complex.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 10217752, 11882715, 11995829<br />
<br />
E.C. 1.3.99.-<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX96 : F420-dependent 2,4-dinitrophenol acid reductase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving coenzyme F420 in the hydrogenation of 2,4,-dinitrophenol generating the hydride sigma-complex of 2,4-dinitrophenol.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 10217752, 11995829, 12732545<br />
<br />
E.C. 1.3.99.-<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX97 : F420 dependent secondary alcohol dehydrogenase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving coenzyme F420 in the oxidation of isopropanol to acetone with the concomitant reduction of F420 to F420H2<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 1879431, 8706724, 15016352, <br />
<br />
E.C : 1.1.99.–<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX98 : Coenzyme F390-G synthetase (GTP:coenzyme F420 guanyltransferase) activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction catalyzing the transfer of guanylyl moiety to coenzyme F420 to form 8-hydroxyguanylylated-coenzyme F420 (coenzyme F390-G).<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 7957247, 8550473, 9352911<br />
<br />
E.C. 2.7.7.–<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX99 : Coenzyme F390 hydrolase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction catalyzing the hydrolysis of 8-hydroxyguanylylated-coenzyme F420 (coenzyme F390-G) into coenzyme F420 and AMP under anaerobic condition.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 8536708, 9352911<br />
<br />
E.C : 3.1.4.-<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX100 : F420H2-dependent quinone oxidoreductase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: F420H2: quinone oxidoreductase complex catalyze the reduction of 2,3-dimethyl-1,4-naphthoquinone with the concomitant oxidation of F420H2 to F420 <br />
<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 8055920, 10971593<br />
<br />
E.C. : 1.5.5.-<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX101 : F0-dependent light harvesting activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving Fo (a non-glutamated of coenzyme F420) as a light-harvesting antenna chromophore.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 19570997<br />
<br />
E.C. <br />
<br />
[GOC:MENGO_EP]</div>
Epurwant
https://wiki.geneontology.org/index.php?title=Methane_biosynthesis&diff=36232
Methane biosynthesis
2011-06-29T13:15:36Z
<p>Epurwant: </p>
<hr />
<div>Working Group Members<br />
*<br />
*<br />
*<br />
<br />
<br />
==Endang_06/22/11==<br />
<br />
====GO:XXXXXX71 : Methanogenesis from formate====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including formic acid.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 6769911, 16346087, 2687241<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX72 : Methanogenesis from monomethylamine ====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including monomethylamine.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16346215<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX73 : Methanogenesis from dimethylamine ====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including dimethylamine.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16346215<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX73 : Methanogenesis from trimethylamine ====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including trimethylamine.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16346215<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
<br />
====GO:XXXXXX74 : Methanogenesis from dimethysulfide====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including dimethylsulfide.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16347202<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
<br />
====GO:XXXXXX75 : Methanogenesis from dimethydisulfide====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including dimethyldisulfide.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16347202<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX76 : Methanogenesis from methanethiol====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including methanethiol.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16347202<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX77 : Methanogenesis from carbonmonoxide====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including carbonmonoxide.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16348788, 18575848, 19191870, <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX78 : Methanopterin biosynthetic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways resulting in the formation of methanopterin, an N-[1′-(2″-amino-4″-hydroxy-7″- methyl-6″- pteridinyl)ethyl]-4-[2′,3′,4′,5′- tetrahydroxypent-1′- yl (5′→1″) O-α-ribofuranosyl-5″-phosphoric acid] aniline, in which the phosphate group is esterified with α-hydroxyglutaric acid.<br />
<br />
is_a : GO:0042559 pteridine-containing compound biosynthetic process<br />
<br />
PMID : 6319137<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX79 : Tetrahydromethanopterin biosynthetic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways resulting in the formation of tetrahydromethanopterin (H4MPT), an (2S)-2-[[(2R,3S,4R,5S)-5-[(2R,3S,4S)-5-[4-[[(1R)-1-[(7S)-2-amino-7-methyl-4-oxo-5,6,7,8-tetrahydro-1H-pteridin-6-yl]ethyl]amino]phenyl]-2,3,4-trihydroxypentoxy]-3,4-dihydroxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxypentanedioic acid<br />
<br />
is_a : GO:0042559 pteridine-containing compound biosynthetic process<br />
<br />
PMID : 6547718, 15028691, 14973120<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX80 : Tetrahydromethanopterin metabolic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways involving tetrahydromethanopterin, a coenzyme involved in the biosynthesis of methane by methanogenic archaea.<br />
<br />
Is_a: GO:0006732 : coenzyme metabolic process<br />
<br />
PMID : 6547718, 2403564, 7852356, 11265475<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX81 : Methanofuran biosynthetic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways resulting in the formation of methanofuran, a 7-[[5-[[5-[2-[4-[[5-(aminomethyl)furan-3-yl]methoxy]phenyl]ethylamino]-1-hydroxy-1,5-dioxopentan-2-yl]amino]-1-hydroxy-1,5-dioxopentan-2-yl]amino]-7-oxoheptane-1,3,4-tricarboxylic acid<br />
<br />
is_a: GO:0018130 : Heterocyclic biosynthetic process<br />
<br />
PMID : 3166985, 1517208, 12013276, 3170480<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX82 : Methanofuran metabolic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways involving methanofuran, a coenzyme involved in the biosynthesis of methane by methanogenic archaea.<br />
<br />
Is_a: GO:0006732 : coenzyme metabolic process<br />
<br />
PMID : 3922409, 12102556 <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX83 : Coenzyme F420 biosynthetic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways resulting in the formation of coenzyme F420, a 2-[[5-hydroxy-4-[2-[hydroxy-[2,3,4-trihydroxy-5-(2,4,8-trioxo-1H-pyrimido[4,5-b]quinolin-10-yl)pentoxy]phosphoryl]oxypropanoylamino]-5-oxopentanoyl]amino]pentanedioic acid.<br />
<br />
is_a: GO:0042727 : flavin-containing compound biosynthetic process<br />
<br />
PMID : 11717263, 11948155, 11535063, 11888293, 12909715, 16585745, 18260642, <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX84 : Coenzyme F420-dependent metabolic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways involving coenzyme F420, a coenzyme involved in the biosynthesis of methane by methanogenic archaea and many other reaction in Bacteria and Eukarya.<br />
<br />
Is_a: GO:0006732 : coenzyme metabolic process<br />
<br />
PMID : 21038477, <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX85 : Coenzyme F420-dependent anabolic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways involving coenzyme F420, a deazaflavin derivative, in the synthesis of a molecule such as in methane biosynthesis.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 20534465<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX86 : Coenzyme F420-dependent catabolic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways involving an enzyme cofactor consisting of coenzyme F420, a deazaflavin derivative, in the degradation of a molecule such as in aflatoxin and picric acid degradations.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 20807200, 21038477, 10217752<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX87 : Coenzyme F420-dependent glucose-6-phosphate dehydrogenase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving coenzyme F420, a deazaflavin derivative, in the conversion of glucose-6-phosphate to 6-phosphogluconolactone.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 8631674, 8997717, 9555906, 18434308<br />
<br />
E.C. EC 1.1.99.34<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX88 : Coenzyme F420-dependent nitroreductase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving coenzyme F420, a deazaflavin derivative, in the conversion of <br />
a nitroimidazopyran (such as PA824, a new antituberculosis drug) to its nitronic acid derivative.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 16387854, 19039139.<br />
<br />
E.C. <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX89 : Coenzyme F420-dependent aflatoxin reductase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving coenzyme F420, a deazaflavin derivative, in the reduction of <br />
furanocumarin moiety of aflatoxin.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 20807200, 21038477<br />
<br />
E.C. 1.---<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX90 : Coenzyme F420-dependent NADP oxidoreductase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving a reduced form of coenzyme F420 (F420H2) to convert NADP+ to NADP(H). <br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 9821972, 11109487, 11726492<br />
<br />
E.C. 1.6.8.-<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX91 : Coenzyme F420-dependent deoxyribodipyrimidine photolyase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: is a DNA repair enzyme. It binds to UV-damaged DNA containing pyrimidine dimers and, upon absorbing a near-UV photon (300 to 500 nm), breaks the cyclobutane ring joining the two pyrimidines of the dimer.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 2668276, 2110564, 2282137, 9360600, <br />
<br />
E.C. 4.1.99.3<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX92 : Coenzyme F420-dependent sulfite reductase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving coenzyme F420 in the conversion of sulfite to sulfide.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 16048999, 16048999<br />
<br />
E.C. 1.--- <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX93 : Coenzyme F420H2-oxidase activity ====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction which converts a reduced form of coenzyme F420 (F420H2) to F420 in the presence of molecular oxygen.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
E.C. 1.---<br />
<br />
PMID : 15340796, 17480207<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX94 : Coenzyme F420-dependent heterodisulfide oxidoreductase activity ====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving a reduced form of coenzyme F420 (F420H2) in the reduction the heterodisulfide bond of 2-mercaptoethanesulfonate and 7-mercaptoheptanoylthreonine phosphate.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 9914308, 11607121<br />
<br />
E.C. <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX95 : Coenzyme F420-dependent 2,4,6-trinitrophenol reductase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving coenzyme F420 in the hydrogenation of 2,4,6-trinitrophenol (picric acid) generating the hydride sigma-complex of picrate and finally the dihydride complex.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 10217752, 11882715, 11995829<br />
<br />
E.C. 1.3.99.-<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX96 : F420-dependent 2,4-dinitrophenol acid reductase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving coenzyme F420 in the hydrogenation of 2,4,-dinitrophenol generating the hydride sigma-complex of 2,4-dinitrophenol.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 10217752, 11995829, 12732545<br />
<br />
E.C. 1.3.99.-<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX97 : F420 dependent secondary alcohol dehydrogenase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving coenzyme F420 in the oxidation of isopropanol to acetone with the concomitant reduction of F420 to F420H2<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 1879431, 8706724, 15016352, <br />
<br />
E.C : 1.1.99.–<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX98 : Coenzyme F390-G synthetase (GTP:coenzyme F420 guanyltransferase) activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction catalyzing the transfer of guanylyl moiety to coenzyme F420 to form 8-hydroxyguanylylated-coenzyme F420 (coenzyme F390-G).<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 7957247, 8550473, 9352911<br />
<br />
E.C. 2.7.7.–<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX99 : Coenzyme F390 hydrolase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction catalyzing the hydrolysis of 8-hydroxyguanylylated-coenzyme F420 (coenzyme F390-G) into coenzyme F420 and AMP under anaerobic condition.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 8536708, 9352911<br />
<br />
E.C : 3.1.4.-<br />
<br />
[GOC:MENGO_EP]<br />
<br />
====GO:XXXXXX100 : F420H2-dependent quinone oxidoreductase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: F420H2: quinone oxidoreductase complex catalyze the reduction of 2,3-dimethyl-1,4-naphthoquinone with the concomitant oxidation of F420H2 to F420 <br />
<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 8055920, 10971593<br />
<br />
E.C. : 1.5.5.-<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX101 : F0-dependent light harvesting activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving Fo (a non-glutamated of coenzyme F420) as a light-harvesting antenna chromophore.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 19570997<br />
<br />
E.C. <br />
<br />
[GOC:MENGO_EP]</div>
Epurwant
https://wiki.geneontology.org/index.php?title=Methane_biosynthesis&diff=36142
Methane biosynthesis
2011-06-24T15:08:45Z
<p>Epurwant: </p>
<hr />
<div>Working Group Members<br />
*<br />
*<br />
*<br />
<br />
<br />
==Endang_06/22/11==<br />
<br />
====GO:XXXXXX71 : Methanogenesis from formate====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including formic acid.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 6769911, 16346087, 2687241<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX72 : Methanogenesis from monomethylamine ====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including monomethylamine.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16346215<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX73 : Methanogenesis from dimethylamine ====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including dimethylamine.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16346215<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX73 : Methanogenesis from trimethylamine ====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including trimethylamine.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16346215<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
<br />
====GO:XXXXXX74 : Methanogenesis from dimethysulfide====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including dimethylsulfide.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16347202<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
<br />
====GO:XXXXXX75 : Methanogenesis from dimethydisulfide====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including dimethyldisulfide.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16347202<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX76 : Methanogenesis from methanethiol====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including methanethiol.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16347202<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX77 : Methanogenesis from carbonmonoxide====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including carbonmonoxide.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16348788, 18575848, 19191870, <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX78 : Methanopterin biosynthetic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways resulting in the formation of methanopterin, an N-[1′-(2″-amino-4″-hydroxy-7″- methyl-6″- pteridinyl)ethyl]-4-[2′,3′,4′,5′- tetrahydroxypent-1′- yl (5′→1″) O-α-ribofuranosyl-5″-phosphoric acid] aniline, in which the phosphate group is esterified with α-hydroxyglutaric acid.<br />
<br />
is_a : GO:0042559 pteridine-containing compound biosynthetic process<br />
<br />
PMID : 6319137<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX79 : Tetrahydromethanopterin biosynthetic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways resulting in the formation of tetrahydromethanopterin (H4MPT), an (2S)-2-[[(2R,3S,4R,5S)-5-[(2R,3S,4S)-5-[4-[[(1R)-1-[(7S)-2-amino-7-methyl-4-oxo-5,6,7,8-tetrahydro-1H-pteridin-6-yl]ethyl]amino]phenyl]-2,3,4-trihydroxypentoxy]-3,4-dihydroxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxypentanedioic acid<br />
<br />
is_a : GO:0042559 pteridine-containing compound biosynthetic process<br />
<br />
PMID : 6547718, 15028691, 14973120<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX80 : Tetrahydromethanopterin metabolic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways involving tetrahydromethanopterin, a coenzyme involved in the biosynthesis of methane by methanogenic archaea.<br />
<br />
Is_a: GO:0006732 : coenzyme metabolic process<br />
<br />
PMID : 6547718, 2403564, 7852356, 11265475<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX81 : Methanofuran biosynthetic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways resulting in the formation of methanofuran, a 7-[[5-[[5-[2-[4-[[5-(aminomethyl)furan-3-yl]methoxy]phenyl]ethylamino]-1-hydroxy-1,5-dioxopentan-2-yl]amino]-1-hydroxy-1,5-dioxopentan-2-yl]amino]-7-oxoheptane-1,3,4-tricarboxylic acid<br />
<br />
is_a: GO:0018130 : Heterocyclic biosynthetic process<br />
<br />
PMID : 3166985, 1517208, 12013276, 3170480<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX82 : Methanofuran metabolic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways involving methanofuran, a coenzyme involved in the biosynthesis of methane by methanogenic archaea.<br />
<br />
Is_a: GO:0006732 : coenzyme metabolic process<br />
<br />
PMID : 3922409, 12102556 <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX83 : Coenzyme F420 biosynthetic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways resulting in the formation of coenzyme F420, a 2-[[5-hydroxy-4-[2-[hydroxy-[2,3,4-trihydroxy-5-(2,4,8-trioxo-1H-pyrimido[4,5-b]quinolin-10-yl)pentoxy]phosphoryl]oxypropanoylamino]-5-oxopentanoyl]amino]pentanedioic acid.<br />
<br />
is_a: GO:0042727 : flavin-containing compound biosynthetic process<br />
<br />
PMID : 11717263, 11948155, 11535063, 11888293, 12909715, 16585745, 18260642, <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX84 : Coenzyme F420-dependent metabolic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways involving coenzyme F420, a coenzyme involved in the biosynthesis of methane by methanogenic archaea and many other reaction in Bacteria and Eukarya.<br />
<br />
Is_a: GO:0006732 : coenzyme metabolic process<br />
<br />
PMID : 21038477, <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX85 : Coenzyme F420-dependent anabolic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways involving coenzyme F420, a deazaflavin derivative, in the synthesis of a molecule such as in methane biosynthesis.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 20534465<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX86 : Coenzyme F420-dependent catabolic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways involving an enzyme cofactor consisting of coenzyme F420, a deazaflavin derivative, in the degradation of a molecule such as in aflatoxin and picric acid degradations.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 20807200, 21038477, 10217752<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX87 : Coenzyme F420-dependent glucose-6-phosphate dehydrogenase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving coenzyme F420, a deazaflavin derivative, in the conversion of glucose-6-phosphate to 6-phosphogluconolactone.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 8631674, 8997717, 9555906, 18434308<br />
<br />
E.C. EC 1.1.99.34<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX88 : Coenzyme F420-dependent nitroreductase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving coenzyme F420, a deazaflavin derivative, in the conversion of <br />
a nitroimidazopyran (such as PA824, a new antituberculosis drug) to its nitronic acid derivative.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 16387854, 19039139.<br />
<br />
E.C. <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX89 : Coenzyme F420-dependent aflatoxin reductase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving coenzyme F420, a deazaflavin derivative, in the reduction of <br />
furanocumarin moiety of aflatoxin.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 20807200, 21038477<br />
<br />
E.C. 1.---<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX90 : Coenzyme F420-dependent NADP oxidoreductase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving a reduced form of coenzyme F420 (F420H2) to convert NADP+ to NADP(H). <br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 9821972, 11109487, 11726492<br />
<br />
E.C. 1.6.8.-<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX91 : Coenzyme F420-dependent deoxyribodipyrimidine photolyase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: is a DNA repair enzyme. It binds to UV-damaged DNA containing pyrimidine dimers and, upon absorbing a near-UV photon (300 to 500 nm), breaks the cyclobutane ring joining the two pyrimidines of the dimer.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 2668276, 2110564, 2282137, 9360600, <br />
<br />
E.C. 4.1.99.3<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX92 : Coenzyme F420-dependent sulfite reductase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving coenzyme F420 in the conversion of sulfite to sulfide.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 16048999, 16048999<br />
<br />
E.C. 1.--- <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX93 : Coenzyme F420H2-oxidase activity ====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction which converts a reduced form of coenzyme F420 (F420H2) to F420 in the presence of molecular oxygen.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
E.C. 1.---<br />
<br />
PMID : 15340796, 17480207<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX94 : Coenzyme F420-dependent heterodisulfide oxidoreductase activity ====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving a reduced form of coenzyme F420 (F420H2) in the reduction the heterodisulfide bond of 2-mercaptoethanesulfonate and 7-mercaptoheptanoylthreonine phosphate.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 9914308, 11607121<br />
<br />
E.C. <br />
<br />
[GOC:MENGO_EP]</div>
Epurwant
https://wiki.geneontology.org/index.php?title=Methane_biosynthesis&diff=36141
Methane biosynthesis
2011-06-24T15:07:09Z
<p>Epurwant: </p>
<hr />
<div>Working Group Members<br />
*<br />
*<br />
*<br />
<br />
<br />
==Endang_06/22/11==<br />
<br />
====GO:XXXXXX71 : Methanogenesis from formate====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including formic acid.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 6769911, 16346087, 2687241<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX72 : Methanogenesis from monomethylamine ====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including monomethylamine.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16346215<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX73 : Methanogenesis from dimethylamine ====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including dimethylamine.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16346215<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX73 : Methanogenesis from trimethylamine ====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including trimethylamine.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16346215<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
<br />
====GO:XXXXXX74 : Methanogenesis from dimethysulfide====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including dimethylsulfide.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16347202<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
<br />
====GO:XXXXXX75 : Methanogenesis from dimethydisulfide====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including dimethyldisulfide.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16347202<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX76 : Methanogenesis from methanethiol====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including methanethiol.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16347202<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX77 : Methanogenesis from carbonmonoxide====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including carbonmonoxide.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16348788, 18575848, 19191870, <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX78 : Methanopterin biosynthetic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways resulting in the formation of methanopterin, an N-[1′-(2″-amino-4″-hydroxy-7″- methyl-6″- pteridinyl)ethyl]-4-[2′,3′,4′,5′- tetrahydroxypent-1′- yl (5′→1″) O-α-ribofuranosyl-5″-phosphoric acid] aniline, in which the phosphate group is esterified with α-hydroxyglutaric acid.<br />
<br />
is_a : GO:0042559 pteridine-containing compound biosynthetic process<br />
<br />
PMID : 6319137<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX79 : Tetrahydromethanopterin biosynthetic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways resulting in the formation of tetrahydromethanopterin (H4MPT), an (2S)-2-[[(2R,3S,4R,5S)-5-[(2R,3S,4S)-5-[4-[[(1R)-1-[(7S)-2-amino-7-methyl-4-oxo-5,6,7,8-tetrahydro-1H-pteridin-6-yl]ethyl]amino]phenyl]-2,3,4-trihydroxypentoxy]-3,4-dihydroxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxypentanedioic acid<br />
<br />
is_a : GO:0042559 pteridine-containing compound biosynthetic process<br />
<br />
PMID : 6547718, 15028691, 14973120<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX80 : Tetrahydromethanopterin metabolic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways involving tetrahydromethanopterin, a coenzyme involved in the biosynthesis of methane by methanogenic archaea.<br />
<br />
Is_a: GO:0006732 : coenzyme metabolic process<br />
<br />
PMID : 6547718, 2403564, 7852356, 11265475<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX81 : Methanofuran biosynthetic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways resulting in the formation of methanofuran, a 7-[[5-[[5-[2-[4-[[5-(aminomethyl)furan-3-yl]methoxy]phenyl]ethylamino]-1-hydroxy-1,5-dioxopentan-2-yl]amino]-1-hydroxy-1,5-dioxopentan-2-yl]amino]-7-oxoheptane-1,3,4-tricarboxylic acid<br />
<br />
is_a: GO:0018130 : Heterocyclic biosynthetic process<br />
<br />
PMID : 3166985, 1517208, 12013276, 3170480<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX82 : Methanofuran metabolic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways involving methanofuran, a coenzyme involved in the biosynthesis of methane by methanogenic archaea.<br />
<br />
Is_a: GO:0006732 : coenzyme metabolic process<br />
<br />
PMID : 3922409, 12102556 <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX83 : Coenzyme F420 biosynthetic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways resulting in the formation of coenzyme F420, a 2-[[5-hydroxy-4-[2-[hydroxy-[2,3,4-trihydroxy-5-(2,4,8-trioxo-1H-pyrimido[4,5-b]quinolin-10-yl)pentoxy]phosphoryl]oxypropanoylamino]-5-oxopentanoyl]amino]pentanedioic acid.<br />
<br />
is_a: GO:0042727 : flavin-containing compound biosynthetic process<br />
<br />
PMID : 11717263, 11948155, 11535063, 11888293, 12909715, 16585745, 18260642, <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX84 : Coenzyme F420-dependent metabolic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways involving coenzyme F420, a coenzyme involved in the biosynthesis of methane by methanogenic archaea and many other reaction in Bacteria and Eukarya.<br />
<br />
Is_a: GO:0006732 : coenzyme metabolic process<br />
<br />
PMID : 21038477, <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX85 : Coenzyme F420-dependent anabolic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways involving coenzyme F420, a deazaflavin derivative, in the synthesis of a molecule such as in methane biosynthesis.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 20534465<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX86 : Coenzyme F420-dependent catabolic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways involving an enzyme cofactor consisting of coenzyme F420, a deazaflavin derivative, in the degradation of a molecule such as in aflatoxin and picric acid degradations.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 20807200, 21038477, 10217752<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX87 : Coenzyme F420-dependent glucose-6-phosphate dehydrogenase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving coenzyme F420, a deazaflavin derivative, in the conversion of glucose-6-phosphate to 6-phosphogluconolactone.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 8631674, 8997717, 9555906, 18434308<br />
<br />
E.C. EC 1.1.99.34<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX88 : Coenzyme F420-dependent nitroreductase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving coenzyme F420, a deazaflavin derivative, in the conversion of <br />
a nitroimidazopyran (such as PA824, a new antituberculosis drug) to its nitronic acid derivative.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 16387854, 19039139.<br />
<br />
E.C. <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX89 : Coenzyme F420-dependent aflatoxin reductase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving coenzyme F420, a deazaflavin derivative, in the reduction of <br />
furanocumarin moiety of aflatoxin.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 20807200, 21038477<br />
<br />
E.C. 1.---<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX90 : F420-dependent NADP oxidoreductase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving a reduced form of coenzyme F420 (F420H2) to convert NADP+ to NADP(H). <br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 9821972, 11109487, 11726492<br />
<br />
E.C. 1.6.8.-<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX91 : F420-dependent deoxyribodipyrimidine photolyase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: is a DNA repair enzyme. It binds to UV-damaged DNA containing pyrimidine dimers and, upon absorbing a near-UV photon (300 to 500 nm), breaks the cyclobutane ring joining the two pyrimidines of the dimer.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 2668276, 2110564, 2282137, 9360600, <br />
<br />
E.C. 4.1.99.3<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX92 : F420-dependent sulfite reductase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving coenzyme F420 in the conversion of sulfite to sulfide.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 16048999, 16048999<br />
<br />
E.C. 1.--- <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX93 : F420H2-oxidase activity ====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction which converts a reduced form of coenzyme F420 (F420H2) to F420 in the presence of molecular oxygen.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
E.C. 1.---<br />
<br />
PMID : 15340796, 17480207<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX94 : F420-dependent heterodisulfide oxidoreductase activity ====<br />
<br />
namespace: molecular_function<br />
<br />
def: A biochemical reaction involving a reduced form of coenzyme F420 (F420H2) in the reduction the heterodisulfide bond of 2-mercaptoethanesulfonate and 7-mercaptoheptanoylthreonine phosphate.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 9914308, 11607121<br />
<br />
E.C. <br />
<br />
[GOC:MENGO_EP]</div>
Epurwant
https://wiki.geneontology.org/index.php?title=Category:Content_MENGO&diff=36140
Category:Content MENGO
2011-06-24T15:05:27Z
<p>Epurwant: </p>
<hr />
<div>This category is reserved for content pertaining to the Microbial Energy Processes Ontology project, aka MENGO.<br />
<br />
===Using the MENGO wiki===<br />
To access the MENGO wiki:<br />
Go to: http://wiki.geneontology.org/index.php/Category:Content_MENGO<br />
Simply create a new account (clickable on top right corner of page).<br />
Confirmation will be sent to your e-mail. Make sure you reply to be given access to the wiki.<br />
Once on : : http://wiki.geneontology.org/index.php/Category:Content_MENGO<br />
Log on (clickable on top right corner of page)<br />
On category page, click on any topic of interest<br />
click on edit <br />
Type: ==name date== <br />
Post your contribution <br />
Be sure to click on "save page"<br />
Useful Links:<br />
Help pages for using wikis: http://meta.wikimedia.org/wiki/Help:Help ;<br />
Quick guide to formatting wiki text: http://meta.wikimedia.org/wiki/Help:Wikitext<br />
<br />
===Topic list:===<br />
*[[MENGO Microbial Energy Processes Term Development | Microbial Energy Processes Term Development]]<br />
**[[MENGO Microbial Biomass Deconstruction | Microbial Biomass Deconstruction]]<br />
***[[MENGO Cellulosome | Cellulosome]]<br />
***[[MENGO Carbohydrate binding | Carbohydrate binding]]<br />
***[[MENGO Enzyme activity | Enzyme activity]]<br />
***[[MENGO Lignin degradation | Lignin degradation]]<br />
**[[MENGO Alcohol biosynthesis | Alcohol biosynthesis]]<br />
***[[MENGO Ethanol biosynthesis| Ethanol biosynthesis]]<br />
***[[MENGO Butanol biosynthesis| Butanol biosynthesis]]<br />
***[[MENGO Isobutanol biosynthesis | Isobutanol biosynthesis]]<br />
**[[MENGO Alkane biosynthesis | Alkane biosynthesis]]<br />
**[[MENGO Fatty Acid Ester biosynthesis | Fatty Acid Ester biosynthesis]]<br />
***[[MENGO Fatty Acid Methyl Ester (FAME) biosynthesis| Fatty Acid Methyl Ester (FAME) biosynthesis]]<br />
***[[MENGO Fatty Acid Ethyl Ester (FAEE) biosynthesis| Fatty Acid Ethyl Ester (FAEE) biosynthesis]]<br />
**[[MENGO Hydrogen biosynthesis | Hydrogen biosynthesis]]<br />
**[[Methane biosynthesis| Methane biosynthesis]]<br />
**[[MENGO Central Metabolism | Central Metabolism]]<br />
**[[MENGO Protein Structure | Protein Structure]]<br />
**[[MENGO Synthetic Biology | Synthetic Biology]]<br />
<br />
**[[REFERENCES | REFERENCES]]</div>
Epurwant
https://wiki.geneontology.org/index.php?title=Category:Content_MENGO&diff=36139
Category:Content MENGO
2011-06-24T15:04:49Z
<p>Epurwant: </p>
<hr />
<div>This category is reserved for content pertaining to the Microbial Energy Processes Ontology project, aka MENGO.<br />
<br />
===Using the MENGO wiki===<br />
To access the MENGO wiki:<br />
Go to: http://wiki.geneontology.org/index.php/Category:Content_MENGO<br />
Simply create a new account (clickable on top right corner of page).<br />
Confirmation will be sent to your e-mail. Make sure you reply to be given access to the wiki.<br />
Once on : : http://wiki.geneontology.org/index.php/Category:Content_MENGO<br />
Log on (clickable on top right corner of page)<br />
On category page, click on any topic of interest<br />
click on edit <br />
Type: ==name date== <br />
Post your contribution <br />
Be sure to click on "save page"<br />
Useful Links:<br />
Help pages for using wikis: http://meta.wikimedia.org/wiki/Help:Help ;<br />
Quick guide to formatting wiki text: http://meta.wikimedia.org/wiki/Help:Wikitext<br />
<br />
===Topic list:===<br />
*[[MENGO Microbial Energy Processes Term Development | Microbial Energy Processes Term Development]]<br />
**[[MENGO Microbial Biomass Deconstruction | Microbial Biomass Deconstruction]]<br />
***[[MENGO Cellulosome | Cellulosome]]<br />
***[[MENGO Carbohydrate binding | Carbohydrate binding]]<br />
***[[MENGO Enzyme activity | Enzyme activity]]<br />
***[[MENGO Lignin degradation | Lignin degradation]]<br />
**[[MENGO Alcohol biosynthesis | Alcohol biosynthesis]]<br />
***[[MENGO Ethanol biosynthesis| Ethanol biosynthesis]]<br />
***[[MENGO Butanol biosynthesis| Butanol biosynthesis]]<br />
***[[MENGO Isobutanol biosynthesis | Isobutanol biosynthesis]]<br />
**[[MENGO Alkane biosynthesis | Alkane biosynthesis]]<br />
**[[MENGO Fatty Acid Ester biosynthesis | Ester biosynthesis]]<br />
***[[MENGO Fatty Acid Methyl Ester (FAME) biosynthesis| Fatty Acid Methyl Ester (FAME) biosynthesis]]<br />
***[[MENGO Fatty Acid Ethyl Ester (FAEE) biosynthesis| Fatty Acid Ethyl Ester (FAEE) biosynthesis]]<br />
**[[MENGO Hydrogen biosynthesis | Hydrogen biosynthesis]]<br />
**[[Methane biosynthesis| Methane biosynthesis]]<br />
**[[MENGO Central Metabolism | Central Metabolism]]<br />
**[[MENGO Protein Structure | Protein Structure]]<br />
**[[MENGO Synthetic Biology | Synthetic Biology]]<br />
<br />
**[[REFERENCES | REFERENCES]]</div>
Epurwant
https://wiki.geneontology.org/index.php?title=Category:Content_MENGO&diff=36111
Category:Content MENGO
2011-06-23T14:15:06Z
<p>Epurwant: </p>
<hr />
<div>This category is reserved for content pertaining to the Microbial Energy Processes Ontology project, aka MENGO.<br />
<br />
===Using the MENGO wiki===<br />
To access the MENGO wiki:<br />
Go to: http://wiki.geneontology.org/index.php/Category:Content_MENGO<br />
Simply create a new account (clickable on top right corner of page).<br />
Confirmation will be sent to your e-mail. Make sure you reply to be given access to the wiki.<br />
Once on : : http://wiki.geneontology.org/index.php/Category:Content_MENGO<br />
Log on (clickable on top right corner of page)<br />
On category page, click on any topic of interest<br />
click on edit <br />
Type: ==name date== <br />
Post your contribution <br />
Be sure to click on "save page"<br />
Useful Links:<br />
Help pages for using wikis: http://meta.wikimedia.org/wiki/Help:Help ;<br />
Quick guide to formatting wiki text: http://meta.wikimedia.org/wiki/Help:Wikitext<br />
<br />
===Topic list:===<br />
*[[MENGO Microbial Energy Processes Term Development | Microbial Energy Processes Term Development]]<br />
**[[MENGO Microbial Biomass Deconstruction | Microbial Biomass Deconstruction]]<br />
***[[MENGO Cellulosome | Cellulosome]]<br />
***[[MENGO Carbohydrate binding | Carbohydrate binding]]<br />
***[[MENGO Enzyme activity | Enzyme activity]]<br />
***[[MENGO Lignin degradation | Lignin degradation]]<br />
**[[MENGO Alcohol biosynthesis | Alcohol biosynthesis]]<br />
***[[MENGO Ethanol biosynthesis| Ethanol biosynthesis]]<br />
***[[MENGO Butanol biosynthesis| Butanol biosynthesis]]<br />
***[[MENGO Isobutanol biosynthesis | Isobutanol biosynthesis]]<br />
**[[MENGO Alkane biosynthesis | Alkane biosynthesis]]<br />
**[[MENGO Fatty Acid Methyl Ester (FAME) biosynthesis| Fatty Acid Methyl Ester (FAME) biosynthesis]]<br />
**[[MENGO Fatty Acid Ethyl Ester (FAEE) biosynthesis| Fatty Acid Ethyl Ester (FAEE) biosynthesis]]<br />
**[[MENGO Hydrogen biosynthesis | Hydrogen biosynthesis]]<br />
**[[Methane biosynthesis| Methane biosynthesis]]<br />
**[[MENGO Central Metabolism | Central Metabolism]]<br />
**[[MENGO Molecular Function | Molecular Function]]<br />
**[[MENGO Protein Structure | Protein Structure]]<br />
**[[MENGO Synthetic Biology | Synthetic Biology]]<br />
<br />
**[[REFERENCES | REFERENCES]]</div>
Epurwant
https://wiki.geneontology.org/index.php?title=Methane_biosynthesis&diff=36094
Methane biosynthesis
2011-06-22T19:41:10Z
<p>Epurwant: </p>
<hr />
<div>Working Group Members<br />
*<br />
*<br />
*<br />
<br />
<br />
==Endang_06/22/11==<br />
<br />
====GO:XXXXXX71 : Methanogenesis from formate====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including formic acid.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 6769911, 16346087, 2687241<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX72 : Methanogenesis from monomethylamine ====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including monomethylamine.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16346215<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX73 : Methanogenesis from dimethylamine ====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including dimethylamine.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16346215<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX73 : Methanogenesis from trimethylamine ====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including trimethylamine.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16346215<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
<br />
====GO:XXXXXX74 : Methanogenesis from dimethysulfide====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including dimethylsulfide.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16347202<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
<br />
====GO:XXXXXX75 : Methanogenesis from dimethydisulfide====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including dimethyldisulfide.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16347202<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX76 : Methanogenesis from methanethiol====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including methanethiol.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16347202<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX77 : Methanogenesis from carbonmonoxide====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including carbonmonoxide.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16348788, 18575848, 19191870, <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX78 : Methanopterin biosynthetic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways resulting in the formation of methanopterin, an N-[1′-(2″-amino-4″-hydroxy-7″- methyl-6″- pteridinyl)ethyl]-4-[2′,3′,4′,5′- tetrahydroxypent-1′- yl (5′→1″) O-α-ribofuranosyl-5″-phosphoric acid] aniline, in which the phosphate group is esterified with α-hydroxyglutaric acid.<br />
<br />
is_a : GO:0042559 pteridine-containing compound biosynthetic process<br />
<br />
PMID : 6319137<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX79 : Tetrahydromethanopterin biosynthetic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways resulting in the formation of tetrahydromethanopterin (H4MPT), an (2S)-2-[[(2R,3S,4R,5S)-5-[(2R,3S,4S)-5-[4-[[(1R)-1-[(7S)-2-amino-7-methyl-4-oxo-5,6,7,8-tetrahydro-1H-pteridin-6-yl]ethyl]amino]phenyl]-2,3,4-trihydroxypentoxy]-3,4-dihydroxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxypentanedioic acid<br />
<br />
is_a : GO:0042559 pteridine-containing compound biosynthetic process<br />
<br />
PMID : 6547718, 15028691, 14973120<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX80 : Tetrahydromethanopterin metabolic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways involving tetrahydromethanopterin, a coenzyme involved in the biosynthesis of methane by methanogenic archaea.<br />
<br />
Is_a: GO:0006732 : coenzyme metabolic process<br />
<br />
PMID : 6547718, 2403564, 7852356, 11265475<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX81 : Methanofuran biosynthetic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways resulting in the formation of methanofuran, a 7-[[5-[[5-[2-[4-[[5-(aminomethyl)furan-3-yl]methoxy]phenyl]ethylamino]-1-hydroxy-1,5-dioxopentan-2-yl]amino]-1-hydroxy-1,5-dioxopentan-2-yl]amino]-7-oxoheptane-1,3,4-tricarboxylic acid<br />
<br />
is_a: GO:0018130 : Heterocyclic biosynthetic process<br />
<br />
PMID : 3166985, 1517208, 12013276, 3170480<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX82 : Methanofuran metabolic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways involving methanofuran, a coenzyme involved in the biosynthesis of methane by methanogenic archaea.<br />
<br />
Is_a: GO:0006732 : coenzyme metabolic process<br />
<br />
PMID : 3922409, 12102556 <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX83 : Coenzyme F420 biosynthetic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways resulting in the formation of coenzyme F420, a 2-[[5-hydroxy-4-[2-[hydroxy-[2,3,4-trihydroxy-5-(2,4,8-trioxo-1H-pyrimido[4,5-b]quinolin-10-yl)pentoxy]phosphoryl]oxypropanoylamino]-5-oxopentanoyl]amino]pentanedioic acid.<br />
<br />
is_a: GO:0042727 : flavin-containing compound biosynthetic process<br />
<br />
PMID : 11717263, 11948155, 11535063, 11888293, 12909715, 16585745, 18260642, <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX84 : Coenzyme F420-dependent metabolic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways involving coenzyme F420, a coenzyme involved in the biosynthesis of methane by methanogenic archaea and many other reaction in Bacteria and Eukarya.<br />
<br />
Is_a: GO:0006732 : coenzyme metabolic process<br />
<br />
PMID : 21038477, <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX85 : Coenzyme F420-dependent anabolic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways involving coenzyme F420, a deazaflavin derivative, in the synthesis of a molecule such as in methane biosynthesis.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 20534465<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX86 : Coenzyme F420-dependent catabolic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways involving an enzyme cofactor consisting of coenzyme F420, a deazaflavin derivative, in the degradation of a molecule such as in aflatoxin and picric acid degradations.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 20807200, 21038477, 10217752<br />
<br />
[GOC:MENGO_EP]</div>
Epurwant
https://wiki.geneontology.org/index.php?title=Methane_biosynthesis&diff=36093
Methane biosynthesis
2011-06-22T17:39:13Z
<p>Epurwant: </p>
<hr />
<div>Working Group Members<br />
*<br />
*<br />
*<br />
<br />
<br />
==Endang_06/22/11==<br />
<br />
====GO:XXXXXX71 : Methanogenesis from formate====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including formic acid.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 6769911, 16346087, 2687241<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX72 : Methanogenesis from monomethylamine ====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including monomethylamine.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16346215<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX73 : Methanogenesis from dimethylamine ====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including dimethylamine.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16346215<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX73 : Methanogenesis from trimethylamine ====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including trimethylamine.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16346215<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
<br />
====GO:XXXXXX74 : Methanogenesis from dimethysulfide====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including dimethylsulfide.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16347202<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
<br />
====GO:XXXXXX75 : Methanogenesis from dimethydisulfide====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including dimethyldisulfide.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16347202<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX76 : Methanogenesis from methanethiol====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including methanethiol.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16347202<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX77 : Methanogenesis from carbonmonoxide====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including carbonmonoxide.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16348788, 18575848, 19191870, <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX78 : Methanopterin biosynthetic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways resulting in the formation of methanopterin, an N-[1′-(2″-amino-4″-hydroxy-7″- methyl-6″- pteridinyl)ethyl]-4-[2′,3′,4′,5′- tetrahydroxypent-1′- yl (5′→1″) O-α-ribofuranosyl-5″-phosphoric acid] aniline, in which the phosphate group is esterified with α-hydroxyglutaric acid.<br />
<br />
is_a : GO:0042559 pteridine-containing compound biosynthetic process<br />
<br />
PMID : 6319137<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX79 : Tetrahydromethanopterin biosynthetic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways resulting in the formation of tetrahydromethanopterin (H4MPT), an (2S)-2-[[(2R,3S,4R,5S)-5-[(2R,3S,4S)-5-[4-[[(1R)-1-[(7S)-2-amino-7-methyl-4-oxo-5,6,7,8-tetrahydro-1H-pteridin-6-yl]ethyl]amino]phenyl]-2,3,4-trihydroxypentoxy]-3,4-dihydroxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxypentanedioic acid<br />
<br />
is_a : GO:0042559 pteridine-containing compound biosynthetic process<br />
<br />
PMID : 6547718, 15028691, 14973120<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX80 : Methanofuran biosynthetic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways resulting in the formation of methanofuran, a 7-[[5-[[5-[2-[4-[[5-(aminomethyl)furan-3-yl]methoxy]phenyl]ethylamino]-1-hydroxy-1,5-dioxopentan-2-yl]amino]-1-hydroxy-1,5-dioxopentan-2-yl]amino]-7-oxoheptane-1,3,4-tricarboxylic acid<br />
<br />
is_a: GO:0018130 : Heterocyclic biosynthetic process<br />
<br />
PMID : 3166985, 1517208, 12013276<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX81 : Coenzyme F420 biosynthetic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways resulting in the formation of coenzyme F420, a 2-[[5-hydroxy-4-[2-[hydroxy-[2,3,4-trihydroxy-5-(2,4,8-trioxo-1H-pyrimido[4,5-b]quinolin-10-yl)pentoxy]phosphoryl]oxypropanoylamino]-5-oxopentanoyl]amino]pentanedioic acid.<br />
<br />
is_a: GO:0042727 : flavin-containing compound biosynthetic process<br />
<br />
PMID : 11717263, 11948155, 11535063, 11888293, 12909715, 16585745, 18260642, <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX82 : Coenzyme F420-dependent metabolic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways involving an enzyme cofactor consisting of coenzyme F420, a deazaflavin derivative, which involves in two-electron transfer redox reactions. <br />
<br />
Is_a: GO:0006732 : coenzyme metabolic process<br />
<br />
PMID : 20534465<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX83 : Coenzyme F420-dependent anabolic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways involving an enzyme cofactor consisting of coenzyme F420, a deazaflavin derivative, in the synthesis of a molecule such as in methane biosynthesis.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 20534465<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX84 : Coenzyme F420-dependent catabolic process====<br />
<br />
namespace: biological_process<br />
<br />
def: The chemical reactions and pathways involving an enzyme cofactor consisting of coenzyme F420, a deazaflavin derivative, in the degradation of a molecule such as in aflatoxin and picric acid degradations.<br />
<br />
part_of: GO:XXXXXX82 : Coenzyme F420-dependent metabolic process<br />
<br />
PMID : 20807200, 21038477, 10217752<br />
<br />
[GOC:MENGO_EP]</div>
Epurwant
https://wiki.geneontology.org/index.php?title=Methane_biosynthesis&diff=36085
Methane biosynthesis
2011-06-22T13:59:14Z
<p>Epurwant: /* Endang_06/22/11 */</p>
<hr />
<div>Working Group Members<br />
*<br />
*<br />
*<br />
<br />
<br />
==Endang_06/22/11==<br />
<br />
====GO:XXXXXX71 : Methanogenesis from formate====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including formic acid.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 6769911, 16346087, 2687241<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX72 : Methanogenesis from monomethylamine ====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including monomethylamine.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16346215<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX73 : Methanogenesis from dimethylamine ====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including dimethylamine.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16346215<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX73 : Methanogenesis from trimethylamine ====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including trimethylamine.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16346215<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
<br />
====GO:XXXXXX74 : Methanogenesis from dimethysulfide====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including dimethylsulfide.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16347202<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
<br />
====GO:XXXXXX75 : Methanogenesis from dimethydisulfide====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including dimethyldisulfide.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16347202<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX76 : Methanogenesis from methanethiol====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including methanethiol.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16347202<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX77 : Methanogenesis from carbonmonoxide====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including carbonmonoxide.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16348788, 18575848, 19191870, <br />
<br />
[GOC:MENGO_EP]</div>
Epurwant
https://wiki.geneontology.org/index.php?title=Methane_biosynthesis&diff=36083
Methane biosynthesis
2011-06-22T13:58:07Z
<p>Epurwant: </p>
<hr />
<div>Working Group Members<br />
*<br />
*<br />
*<br />
<br />
==Endang_06/22/11==<br />
<br />
====GO:XXXXXX71 : Methanogenesis from formate====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including formic acid.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 6769911, 16346087, 2687241<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX72 : Methanogenesis from monomethylamine ====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including monomethylamine.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16346215<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX73 : Methanogenesis from dimethylamine ====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including dimethylamine.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16346215<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX73 : Methanogenesis from trimethylamine ====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including trimethylamine.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16346215<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
<br />
====GO:XXXXXX74 : Methanogenesis from dimethysulfide====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including dimethylsulfide.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16347202<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
<br />
====GO:XXXXXX75 : Methanogenesis from dimethydisulfide====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including dimethyldisulfide.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16347202<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX76 : Methanogenesis from methanethiol====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including methanethiol.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16347202<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX77 : Methanogenesis from carbonmonoxide====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including carbonmonoxide.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16348788, 18575848, 19191870, <br />
<br />
[GOC:MENGO_EP]</div>
Epurwant
https://wiki.geneontology.org/index.php?title=Methane_biosynthesis&diff=36081
Methane biosynthesis
2011-06-22T13:56:45Z
<p>Epurwant: Created page with "Working Group Members * * *"</p>
<hr />
<div>Working Group Members<br />
*<br />
*<br />
*</div>
Epurwant
https://wiki.geneontology.org/index.php?title=Category:Content_MENGO&diff=36080
Category:Content MENGO
2011-06-22T13:53:38Z
<p>Epurwant: </p>
<hr />
<div>This category is reserved for content pertaining to the Microbial Energy Processes Ontology project, aka MENGO.<br />
<br />
===Using the MENGO wiki===<br />
To access the MENGO wiki:<br />
Go to: http://wiki.geneontology.org/index.php/Category:Content_MENGO<br />
Simply create a new account (clickable on top right corner of page).<br />
Confirmation will be sent to your e-mail. Make sure you reply to be given access to the wiki.<br />
Once on : : http://wiki.geneontology.org/index.php/Category:Content_MENGO<br />
Log on (clickable on top right corner of page)<br />
On category page, click on any topic of interest<br />
click on edit <br />
Type: ==name date== <br />
Post your contribution <br />
Be sure to click on "save page"<br />
Useful Links:<br />
Help pages for using wikis: http://meta.wikimedia.org/wiki/Help:Help ;<br />
Quick guide to formatting wiki text: http://meta.wikimedia.org/wiki/Help:Wikitext<br />
<br />
===Topic list:===<br />
*[[MENGO Microbial Energy Processes Term Development | Microbial Energy Processes Term Development]]<br />
**[[MENGO Microbial Biomass Deconstruction | Microbial Biomass Deconstruction]]<br />
***[[MENGO Cellulosome | Cellulosome]]<br />
***[[MENGO Carbohydrate binding | Carbohydrate binding]]<br />
***[[MENGO Enzyme activity | Enzyme activity]]<br />
***[[MENGO Lignin degradation | Lignin degradation]]<br />
**[[MENGO Alcohol biosynthesis | Alcohol biosynthesis]]<br />
***[[MENGO Ethanol biosynthesis| Ethanol biosynthesis]]<br />
***[[MENGO Butanol biosynthesis| Butanol biosynthesis]]<br />
***[[MENGO Isobutanol biosynthesis | Isobutanol biosynthesis]]<br />
**[[MENGO Alkane biosynthesis | Alkane biosynthesis]]<br />
**[[MENGO Hydrogen biosynthesis | Hydrogen biosynthesis]]<br />
**[[Methane biosynthesis| Methane biosynthesis]]<br />
**[[MENGO Central Metabolism | Central Metabolism]]<br />
**[[MENGO Molecular Function | Molecular Function]]<br />
**[[MENGO Protein Structure | Protein Structure]]<br />
**[[MENGO Synthetic Biology | Synthetic Biology]]<br />
<br />
**[[REFERENCES | REFERENCES]]</div>
Epurwant
https://wiki.geneontology.org/index.php?title=Category:Content_MENGO&diff=36079
Category:Content MENGO
2011-06-22T13:52:25Z
<p>Epurwant: </p>
<hr />
<div>This category is reserved for content pertaining to the Microbial Energy Processes Ontology project, aka MENGO.<br />
<br />
===Using the MENGO wiki===<br />
To access the MENGO wiki:<br />
Go to: http://wiki.geneontology.org/index.php/Category:Content_MENGO<br />
Simply create a new account (clickable on top right corner of page).<br />
Confirmation will be sent to your e-mail. Make sure you reply to be given access to the wiki.<br />
Once on : : http://wiki.geneontology.org/index.php/Category:Content_MENGO<br />
Log on (clickable on top right corner of page)<br />
On category page, click on any topic of interest<br />
click on edit <br />
Type: ==name date== <br />
Post your contribution <br />
Be sure to click on "save page"<br />
Useful Links:<br />
Help pages for using wikis: http://meta.wikimedia.org/wiki/Help:Help ;<br />
Quick guide to formatting wiki text: http://meta.wikimedia.org/wiki/Help:Wikitext<br />
<br />
===Topic list:===<br />
*[[MENGO Microbial Energy Processes Term Development | Microbial Energy Processes Term Development]]<br />
**[[MENGO Microbial Biomass Deconstruction | Microbial Biomass Deconstruction]]<br />
***[[MENGO Cellulosome | Cellulosome]]<br />
***[[MENGO Carbohydrate binding | Carbohydrate binding]]<br />
***[[MENGO Enzyme activity | Enzyme activity]]<br />
***[[MENGO Lignin degradation | Lignin degradation]]<br />
**[[MENGO Alcohol biosynthesis | Alcohol biosynthesis]]<br />
***[[MENGO Ethanol biosynthesis| Ethanol biosynthesis]]<br />
***[[MENGO Buthanol biosynthesis| Buthanol biosynthesis]]<br />
***[[MENGO Isobuthanol biosynthesis | Isobuthanol biosynthesis]]<br />
**[[MENGO Alkane biosynthesis | Alkane biosynthesis]]<br />
**[[MENGO Hydrogen biosynthesis | Hydrogen biosynthesis]]<br />
**[[Methane biosynthesis| Methane biosynthesis]]<br />
**[[MENGO Central Metabolism | Central Metabolism]]<br />
**[[MENGO Molecular Function | Molecular Function]]<br />
**[[MENGO Protein Structure | Protein Structure]]<br />
**[[MENGO Synthetic Biology | Synthetic Biology]]<br />
<br />
**[[REFERENCES | REFERENCES]]</div>
Epurwant
https://wiki.geneontology.org/index.php?title=Category:Content_MENGO&diff=36078
Category:Content MENGO
2011-06-22T13:50:45Z
<p>Epurwant: </p>
<hr />
<div>This category is reserved for content pertaining to the Microbial Energy Processes Ontology project, aka MENGO.<br />
<br />
===Using the MENGO wiki===<br />
To access the MENGO wiki:<br />
Go to: http://wiki.geneontology.org/index.php/Category:Content_MENGO<br />
Simply create a new account (clickable on top right corner of page).<br />
Confirmation will be sent to your e-mail. Make sure you reply to be given access to the wiki.<br />
Once on : : http://wiki.geneontology.org/index.php/Category:Content_MENGO<br />
Log on (clickable on top right corner of page)<br />
On category page, click on any topic of interest<br />
click on edit <br />
Type: ==name date== <br />
Post your contribution <br />
Be sure to click on "save page"<br />
Useful Links:<br />
Help pages for using wikis: http://meta.wikimedia.org/wiki/Help:Help ;<br />
Quick guide to formatting wiki text: http://meta.wikimedia.org/wiki/Help:Wikitext<br />
<br />
===Topic list:===<br />
*[[MENGO Microbial Energy Processes Term Development | Microbial Energy Processes Term Development]]<br />
**[[MENGO Microbial Biomass Deconstruction | Microbial Biomass Deconstruction]]<br />
***[[MENGO Cellulosome | Cellulosome]]<br />
***[[MENGO Carbohydrate binding | Carbohydrate binding]]<br />
***[[MENGO Enzyme activity | Enzyme activity]]<br />
***[[MENGO Lignin degradation | Lignin degradation]]<br />
**[[MENGO Alcohol biosynthesis | Alcohol biosynthesis]]<br />
***[[MENGO Ethanol | Ethanol]]<br />
***[[MENGO Buthanol | Buthanol]]<br />
***[[MENGO Isobuthanol | Isobuthanol]]<br />
**[[MENGO Alkane biosynthesis | Alkane biosynthesis]]<br />
**[[MENGO Hydrogen biosynthesis | Hydrogen biosynthesis]]<br />
**[[Methanogenesis | Methanogenesis]]<br />
**[[MENGO Central Metabolism | Central Metabolism]]<br />
**[[MENGO Molecular Function | Molecular Function]]<br />
**[[MENGO Protein Structure | Protein Structure]]<br />
**[[MENGO Synthetic Biology | Synthetic Biology]]<br />
<br />
**[[REFERENCES | REFERENCES]]</div>
Epurwant
https://wiki.geneontology.org/index.php?title=Methanogenesis&diff=36074
Methanogenesis
2011-06-22T13:39:12Z
<p>Epurwant: </p>
<hr />
<div>Working group members<br />
*<br />
*<br />
*<br />
<br />
<br />
==Endang_06/22/11==<br />
<br />
====GO:XXXXXX71 : Methanogenesis from formate====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including formic acid.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 6769911, 16346087, 2687241<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX72 : Methanogenesis from monomethylamine ====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including monomethylamine.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16346215<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX73 : Methanogenesis from dimethylamine ====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including dimethylamine.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16346215<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX73 : Methanogenesis from trimethylamine ====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including trimethylamine.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16346215<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
<br />
====GO:XXXXXX74 : Methanogenesis from dimethysulfide====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including dimethylsulfide.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16347202<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
<br />
====GO:XXXXXX75 : Methanogenesis from dimethydisulfide====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including dimethyldisulfide.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16347202<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX76 : Methanogenesis from methanethiol====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including methanethiol.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16347202<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX77 : Methanogenesis from carbonmonoxide====<br />
<br />
namespace: biological_process<br />
<br />
def: The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including carbonmonoxide.<br />
<br />
part_of : GO:0015948! Methanogenesis<br />
<br />
PMID : 16348788, 18575848, 19191870, <br />
<br />
[GOC:MENGO_EP]</div>
Epurwant
https://wiki.geneontology.org/index.php?title=Methanogenesis&diff=36073
Methanogenesis
2011-06-22T13:37:34Z
<p>Epurwant: </p>
<hr />
<div>Working group members<br />
*<br />
*<br />
*<br />
<br />
<br />
==Endang_06/22/11==<br />
===Methanogenesis===</div>
Epurwant
https://wiki.geneontology.org/index.php?title=Methanogenesis&diff=36072
Methanogenesis
2011-06-22T13:35:45Z
<p>Epurwant: Created page with "Working group members ==endang_062211=="</p>
<hr />
<div>Working group members<br />
<br />
<br />
==endang_062211==</div>
Epurwant
https://wiki.geneontology.org/index.php?title=Category:Content_MENGO&diff=36071
Category:Content MENGO
2011-06-22T13:29:48Z
<p>Epurwant: </p>
<hr />
<div>This category is reserved for content pertaining to the Microbial Energy Processes Ontology project, aka MENGO.<br />
<br />
===Using the MENGO wiki===<br />
To access the MENGO wiki:<br />
Go to: http://wiki.geneontology.org/index.php/Category:Content_MENGO<br />
Simply create a new account (clickable on top right corner of page).<br />
Confirmation will be sent to your e-mail. Make sure you reply to be given access to the wiki.<br />
Once on : : http://wiki.geneontology.org/index.php/Category:Content_MENGO<br />
Log on (clickable on top right corner of page)<br />
On category page, click on any topic of interest<br />
click on edit <br />
Type: ==name date== <br />
Post your contribution <br />
Be sure to click on "save page"<br />
Useful Links:<br />
Help pages for using wikis: http://meta.wikimedia.org/wiki/Help:Help ;<br />
Quick guide to formatting wiki text: http://meta.wikimedia.org/wiki/Help:Wikitext<br />
<br />
===Topic list:===<br />
*[[MENGO Microbial Energy Processes Term Development | Microbial Energy Processes Term Development]]<br />
**[[MENGO Microbial Biomass Deconstruction | Microbial Biomass Deconstruction]]<br />
***[[MENGO Cellulosome | Cellulosome]]<br />
***[[MENGO Carbohydrate binding | Carbohydrate binding]]<br />
***[[MENGO Enzyme activity | Enzyme activity]]<br />
***[[MENGO Lignin degradation | Lignin degradation]]<br />
**[[Methanogenesis | Methanogenesis ]]<br />
**[[MENGO Central Metabolism | Central Metabolism]]<br />
**[[MENGO Molecular Function | Molecular Function]]<br />
**[[MENGO Protein Structure | Protein Structure]]<br />
**[[MENGO Synthetic Biology | Synthetic Biology]]<br />
**[[MENGO Alkane Production | Alkane Production]]<br />
**[[REFERENCES | REFERENCES]]</div>
Epurwant
https://wiki.geneontology.org/index.php?title=MENGO_Enzyme_activity&diff=35924
MENGO Enzyme activity
2011-06-14T17:54:30Z
<p>Epurwant: </p>
<hr />
<div>Working Group Members<br />
*<br />
*<br />
*<br />
*<br />
<br />
==Trudy_5/10/11==<br />
<br />
===MOLECULAR FUNCTION ONTOLOGY===<br />
<br />
====GO:XXXXXX14:hemicellulase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalysis of the breakdown of hemicellulose, a plant cell wall polysaccharidesthat have a backbone of 1,4-linked beta-D-pyranosyl residues in which O4 is in the equatorial orientation<br />
<br />
is_a : GO:0016787: hydrolase activity<br />
<br />
[GOC:MENGO_TT]<br />
<br />
====GO:XXXXXX15:exo-1,4-β-d- xylanases activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalysis of the hydrolysis of (1→4)-β-D-xylans, to remove successive D-xylose residues from the non-reducing termini<br />
<br />
is_a :GO:004553 hydrolase activity, hydrolyzing O-glycosyl compounds<br />
<br />
[GOC:MENGO_TT]<br />
<br />
====GO:XXXXXX16:1,4-β-d- mannosidase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalysis of the hydrolysis of 1,4-beta-D-mannosidic linkages in mannans, galactomannans and glucomannans<br />
<br />
is_a :GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds<br />
<br />
[GOC:MENGO_TT]<br />
<br />
==== GO:XXXXXX143:sinapyl alcohol dehydrogenase activity====<br />
<br />
namespace: molecular function<br />
<br />
def: catalysis of the reduction of hydroxycinnamaldehydes<br />
<br />
is_a: GO:0003824 catalytic activity<br />
<br />
synonym: SAD activity<br />
[GOC:MENGO_TT]<br />
<br />
<br />
==Endang_05/26/11==<br />
<br />
===Polysaccharide Lyase===<br />
<br />
====GO:XXXXXX43 : Acharan sulfate lyase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the cleavage of a carbon-oxygen bond of acharan sulfate, a uniformly repeating disaccharide structure of α-d-n-acetylglucosaminyl-2-O-sulfo-α-l-iduronic acid, by the elimination of a alcohol.<br />
<br />
is_a : GO:0016835! carbon-oxygen lyase activity<br />
<br />
[GOC:MENGO_EP]<br />
<br />
====GO:XXXXXX44 : Exooligoalginate lyase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the cleavage of a carbon-oxygen bond by the elimination of an alcohol from an oligoalginate<br />
<br />
is_a : GO:0016835! carbon-oxygen lyase activity<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX45 : Gellan lyase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the cleavage of a carbon-oxygen bond by the elimination of an alcohol from a gellan, a linear repeating tetrasaccharide ->3-beta-D-Glc-(134)-beta-D-GlcA-(134)-beta-D-Glc-(134)-alpha-L-Rha-(13] composed of D-glucose (Glc), D-glucuronic acid (GlcA), and L-rhamnose (Rha).<br />
<br />
is_a : GO:0016835! carbon-oxygen lyase activity<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX46 : Ulvan lyase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the cleavage of a carbon-oxygen bond by the elimination of an alcohol from ulvan, a repeating structure of ->4)-beta-D-GlcA-(1,4)-alpha-L-Rha 3S-(1,4)-alpha-L-IdoA-(1,4)-alpha-L-Rha 3S-(1-><br />
<br />
is_a : GO:0016835! carbon-oxygen lyase activity<br />
<br />
[GOC:MENGO_EP<br />
<br />
<br />
===Carbohydrate Esterase===<br />
<br />
====GO:XXXXXX37 : 4-O-methyl-glucuronoyl methylesterase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of a 4-O-methyl-D-glucuronoic acid to give methanol and glucuronic acid<br />
<br />
is_a : GO:0052689! carboxylic ester hydrolase<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX38 : Brefeldin A esterase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of brefeldin A (γ,4- dihydroxy- 2-(6-hydroxy-1-heptenyl)- 4-cyclopentanecrotonic acid λ-lactone) to give brefeldin A acid <br />
<br />
is_a : GO:0052689! carboxylic ester hydrolase<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX39 : Chitooligosaccharide deacetylase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of chitooligosaccharide deacetylase to give oligochitosan and acetic acid<br />
<br />
is_a : GO:0052689! carboxylic ester hydrolase<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX40 : Diacetylchitobiose deacetylase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of a diacetylchitobiose ester to give chitobiose and acetic acid<br />
<br />
is_a : GO:0052689! carboxylic ester hydrolase<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX41 : N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-α-D-glucopyranoside deacetylase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-α-D-glucopyranoside ester to give 1-D-myo-inosityl-2-amino-2-deoxy-α-D-glucopyranoside and acetic acid<br />
<br />
is_a : GO:0052689! carboxylic ester hydrolase<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
<br />
====GO:XXXXXX42 : Pectin acetylesterase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of pectin acetyl ester to give pectate and ethanol<br />
<br />
is_a : GO:0052689! carboxylic ester hydrolase<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
<br />
===Glycoside Hydrolase===<br />
<br />
====GO:XXXXXX47 : 2-keto-3-deoxynononic acid sialidase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of of the glycosidic linkage of 2-keto-3-deoxynononic acid<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
[GOC:MENGO_EP]<br />
<br />
====GO:XXXXXX48 : Amylopullulanase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalysis of the hydrolysis of the α-1,4 glycosidic linkage of amylopullulanase====<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds<br />
<br />
PMID: 10091322, 19111640 <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX49 : Baicalin beta-D-glucuronidase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of baicalin ((2S,3S,4S,5R,6S)-6-(5,6-dihydroxy-4-oxo-2-phenyl-chromen-7-yl)oxy-3,4,5-trihydroxy-tetrahydropyran-2-carboxylic acid) to baicalein and D-glucuronate <br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
(EC 3.2.1.167)<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX50 : Chitobiose phosphorylase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of chitobiose phosphate to chitobiose and phosphate<br />
<br />
is_a : GO:000464! phosphorylase activity <br />
<br />
(EC 2.4.1.-)<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX51 : Chondroitin hydrolase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of chodroitin, a linear polymer structure composed of the repeating disaccharide unit –4GlcUA1-3GalNAc1–, where GlcUA represents D-glucuronic acid and GalNAc represents N-acetyl-D-galactosaminet. <br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
(EC 2.4.1.-)<br />
<br />
PMID:18390555<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX52 : Concanavalin B activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Concanavalin B is a glycoside hydrolases that are both catalytically active chitinases (EC 3.2.1.14) and endo-β-N-acetylglucosaminidases (EC 3.2.1.96) and also sub-families of non-hydrolytic proteins that function as carbohydrate binding modules / "lectins" or as xylanase inhibitors.<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
(EC 3.2.1.14) and (EC 3.2.1.96)<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX53 : Narbonin activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: is a glycoside hydrolases that is predicted to have chitinases (EC 3.2.1.14) activity<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
(EC 3.2.1.14)<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX54 : d-4,5 unsaturated β-glucuronyl hydrolase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of d-4,5 unsaturated β-glucuronate. <br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
EC 3.2.1.-<br />
<br />
PMID:12729728<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX55 : Endo-processive cellulases activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of cellulose and the degradation of the cellulose chain continue after an initial endohydrolase-attack. This enzyme family are inverting glycosidases, which preferentially attack the reducing end of the substrate.<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds<br />
<br />
EC 3.2.1.-<br />
<br />
PMID: 18035374<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX56 : Endorhamnosidase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of rhamnose by cleaving its α-L-1,3 linkage <br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds<br />
<br />
EC 3.2.1.-<br />
<br />
PMID: 383902, 10439404 <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX57 : Endo-xylogalacturonan hydrolase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of xylogalacturonate (XGA), a chain of α-(1 → 4)-linked d-galacturonic acid, which is substituted with β-d-xylose at the O-3 position, by cleaving its α-(1 → 4)-linkage.<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
EC 3.2.1.-<br />
<br />
PMID:10618200<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX58 : Exo-β-glucosaminidase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalyze the hydrolysis of chitosan or chitosan oligosaccharides to remove successive D-glucosamine residues from the non-reducing termini<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
EC 3.2.1.165<br />
<br />
PMID: 16349528, 16316314, 16636831<br />
<br />
[GOC:MENGO_EP]<br />
<br />
====GO:XXXXXX59 : Type C lysozyme activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalyze the hydrolysis hydrolysis of 1,4-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues in a peptidoglycan and between N-acetyl-D-glucosamine residues in chitodextrins. C-type lysozymes are closely related to alpha-lactalbumin in sequence and structure. <br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
EC 3.2.1.17<br />
<br />
PMID: 8765309, 20420912<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX60 : Type i (invertebrate) lysozyme activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalyze the hydrolysis hydrolysis of 1,4-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues in a peptidoglycan and between N-acetyl-D-glucosamine residues in chitodextrins. <br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
EC 3.2.1.17<br />
<br />
PMID: 11965437<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX61 : Maltopentaose-forming α-amylase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of alpha-bonds of large alpha-linked polysaccharides such as starch and glycogen, yielding maltopentaose.<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
EC EC 3.2.1.1 <br />
<br />
PMID:1368136, 1714389<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX62 : Maltotriose-forming α-amylase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of alpha-bonds of large alpha-linked polysaccharides such as starch and glycogen, yielding maltotriose.<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
EC 3.2.1.116<br />
<br />
PMID: 7511484, 9406414<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX63 : Mannosyl-oligosaccharide α-1,3-mannosidase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of alpha-1,3-bonds of mannosyl-oligosaccharide<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
EC EC 3.2.1.-<br />
<br />
PMID: 2338081, 1849817<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX64 : Mannosyl-oligosaccharide α-1,6-mannosidase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of alpha-1,6-bonds of mannosyl-oligosaccharide<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds<br />
<br />
EC EC 3.2.1.-<br />
<br />
PMID: 2338081, 1849817<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX65 : Reuteransucrase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the synthesis of reuteransucrase a unique soluble glucan (reuteran) with mainly alpha-(1-->4) glucosidic linkages. <br />
<br />
is_a : GO:0016758 ! Transferase activity, transferring hexosyl groups <br />
<br />
EC 2.4.1.-<br />
<br />
PMID: 15256553, 16000808<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX66 : Rhamnogalacturonan α-L-rhamnopyranohydrolase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of terminal non-reducing alpha-L-rhamnose residues in rhamnogalaturonan<br />
<br />
is_a : GO:0016758 ! Transferase activity, transferring hexosyl groups <br />
<br />
EC 3.2.1.40<br />
<br />
PMID:7972516<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX67 : Trans-sialidase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of alpha-(2->3)-, alpha-(2->6)-, alpha-(2->8)- glycosidic linkages of terminal sialic acid residues in oligosaccharides, glycoproteins, glycolipids, colominic acid and synthetic substrates. Trans-sialidase preferring the transfer of sialic acids from sialoglycoconjugates to beta-galactosyl acceptor molecules<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
EC 2.4.1.-<br />
<br />
PMID: 8405811, 7826016<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX68 : α-1,4-mannosidase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of α-1,4 linkage of the terminal, non-reducing α-D-mannose residues in α-D-mannosides<br />
[GOC:MENGO_EP]<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
EC 3.2.1.-PMID: 20081828<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX69 : β-1,3-mannanase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis beta-1,3-linkages of mannan, releasing mannose.<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
EC 3.2.1.-<br />
<br />
PMID: 20030048<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX70 : β-6-SO3-N-acetylglucosaminidase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze cleaving of the terminal 2-acetamido-2-deoxy-beta-D-glucopyranoside 6-sulfate (6-SO3-GlcNAc) residues from sulfomucin <br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
EC 3.2.1.-<br />
<br />
PMID : 15716424<br />
<br />
[GOC:MENGO_EP]</div>
Epurwant
https://wiki.geneontology.org/index.php?title=MENGO_Enzyme_activity&diff=35923
MENGO Enzyme activity
2011-06-14T17:47:27Z
<p>Epurwant: </p>
<hr />
<div>Working Group Members<br />
*<br />
*<br />
*<br />
*<br />
<br />
==Trudy_5/10/11==<br />
<br />
===MOLECULAR FUNCTION ONTOLOGY===<br />
<br />
====GO:XXXXXX14:hemicellulase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalysis of the breakdown of hemicellulose, a plant cell wall polysaccharidesthat have a backbone of 1,4-linked beta-D-pyranosyl residues in which O4 is in the equatorial orientation<br />
<br />
is_a : GO:0016787: hydrolase activity<br />
<br />
[GOC:MENGO_TT]<br />
<br />
====GO:XXXXXX15:exo-1,4-β-d- xylanases activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalysis of the hydrolysis of (1→4)-β-D-xylans, to remove successive D-xylose residues from the non-reducing termini<br />
<br />
is_a :GO:004553 hydrolase activity, hydrolyzing O-glycosyl compounds<br />
<br />
[GOC:MENGO_TT]<br />
<br />
====GO:XXXXXX16:1,4-β-d- mannosidase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalysis of the hydrolysis of 1,4-beta-D-mannosidic linkages in mannans, galactomannans and glucomannans<br />
<br />
is_a :GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds<br />
<br />
[GOC:MENGO_TT]<br />
<br />
==== GO:XXXXXX143:sinapyl alcohol dehydrogenase activity====<br />
<br />
namespace: molecular function<br />
<br />
def: catalysis of the reduction of hydroxycinnamaldehydes<br />
<br />
is_a: GO:0003824 catalytic activity<br />
<br />
synonym: SAD activity<br />
[GOC:MENGO_TT]<br />
<br />
<br />
==Endang_05/26/11==<br />
<br />
===Polysaccharide Lyase===<br />
<br />
====GO:XXXXXX43 : Acharan sulfate lyase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the cleavage of a carbon-oxygen bond of acharan sulfate, a uniformly repeating disaccharide structure of α-d-n-acetylglucosaminyl-2-O-sulfo-α-l-iduronic acid, by the elimination of a alcohol.<br />
<br />
is_a : GO:0016835! carbon-oxygen lyase activity<br />
<br />
[GOC:MENGO_EP]<br />
<br />
====GO:XXXXXX44 : Exooligoalginate lyase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the cleavage of a carbon-oxygen bond by the elimination of an alcohol from an oligoalginate<br />
<br />
is_a : GO:0016835! carbon-oxygen lyase activity<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX45 : Gellan lyase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the cleavage of a carbon-oxygen bond by the elimination of an alcohol from a gellan, a linear repeating tetrasaccharide ->3-beta-D-Glc-(134)-beta-D-GlcA-(134)-beta-D-Glc-(134)-alpha-L-Rha-(13] composed of D-glucose (Glc), D-glucuronic acid (GlcA), and L-rhamnose (Rha).<br />
<br />
is_a : GO:0016835! carbon-oxygen lyase activity<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX46 : Ulvan lyase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the cleavage of a carbon-oxygen bond by the elimination of an alcohol from ulvan, a repeating structure of ->4)-beta-D-GlcA-(1,4)-alpha-L-Rha 3S-(1,4)-alpha-L-IdoA-(1,4)-alpha-L-Rha 3S-(1-><br />
<br />
is_a : GO:0016835! carbon-oxygen lyase activity<br />
<br />
[GOC:MENGO_EP<br />
<br />
<br />
===Carbohydrate Esterase===<br />
<br />
====GO:XXXXXX37 : 4-O-methyl-glucuronoyl methylesterase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of a 4-O-methyl-D-glucuronoic acid to give methanol and glucuronic acid<br />
<br />
is_a : GO:0052689! carboxylic ester hydrolase<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX38 : Brefeldin A esterase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of brefeldin A (γ,4- dihydroxy- 2-(6-hydroxy-1-heptenyl)- 4-cyclopentanecrotonic acid λ-lactone) to give brefeldin A acid <br />
<br />
is_a : GO:0052689! carboxylic ester hydrolase<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX39 : Chitooligosaccharide deacetylase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of chitooligosaccharide deacetylase to give oligochitosan and acetic acid<br />
<br />
is_a : GO:0052689! carboxylic ester hydrolase<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX40 : Diacetylchitobiose deacetylase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of a diacetylchitobiose ester to give chitobiose and acetic acid<br />
<br />
is_a : GO:0052689! carboxylic ester hydrolase<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX41 : N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-α-D-glucopyranoside deacetylase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-α-D-glucopyranoside ester to give 1-D-myo-inosityl-2-amino-2-deoxy-α-D-glucopyranoside and acetic acid<br />
<br />
is_a : GO:0052689! carboxylic ester hydrolase<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
<br />
====GO:XXXXXX42 : Pectin acetylesterase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of pectin acetyl ester to give pectate and ethanol<br />
<br />
is_a : GO:0052689! carboxylic ester hydrolase<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
<br />
===Glycoside Hydrolase===<br />
<br />
====GO:XXXXXX47 : 2-keto-3-deoxynononic acid sialidase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of of the glycosidic linkage of 2-keto-3-deoxynononic acid<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
[GOC:MENGO_EP]<br />
<br />
====GO:XXXXXX48 : Amylopullulanase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalysis of the hydrolysis of the α-1,4 glycosidic linkage of amylopullulanase====<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds<br />
<br />
PMID: 10091322, 19111640 <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX49 : Baicalin beta-D-glucuronidase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of baicalin ((2S,3S,4S,5R,6S)-6-(5,6-dihydroxy-4-oxo-2-phenyl-chromen-7-yl)oxy-3,4,5-trihydroxy-tetrahydropyran-2-carboxylic acid) to baicalein and D-glucuronate <br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
(EC 3.2.1.167)<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX50 : Chitobiose phosphorylase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of chitobiose phosphate to chitobiose and phosphate<br />
<br />
is_a : GO:000464! phosphorylase activity <br />
<br />
(EC 2.4.1.-)<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX51 : Chondroitin hydrolase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of chodroitin, a linear polymer structure composed of the repeating disaccharide unit –4GlcUA1-3GalNAc1–, where GlcUA represents D-glucuronic acid and GalNAc represents N-acetyl-D-galactosaminet. <br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
(EC 2.4.1.-)<br />
<br />
PMID:18390555<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX52 : Concanavalin B activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Concanavalin B is a glycoside hydrolases that are both catalytically active chitinases (EC 3.2.1.14) and endo-β-N-acetylglucosaminidases (EC 3.2.1.96) and also sub-families of non-hydrolytic proteins that function as carbohydrate binding modules / "lectins" or as xylanase inhibitors.<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
(EC 3.2.1.14) and (EC 3.2.1.96)<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX53 : Narbonin activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: is a glycoside hydrolases that is predicted to have chitinases (EC 3.2.1.14) activity<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
(EC 3.2.1.14)<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX54 : d-4,5 unsaturated β-glucuronyl hydrolase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of d-4,5 unsaturated β-glucuronate. <br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
EC 3.2.1.-<br />
<br />
PMID:12729728<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX55 : Endo-processive cellulases activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of cellulose and the degradation of the cellulose chain continue after an initial endohydrolase-attack. This enzyme family are inverting glycosidases, which preferentially attack the reducing end of the substrate.<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds<br />
<br />
EC 3.2.1.-<br />
<br />
PMID: 18035374<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX56 : Endorhamnosidase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of rhamnose by cleaving its α-L-1,3 linkage <br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds<br />
<br />
EC 3.2.1.-<br />
<br />
PMID: 383902, 10439404 <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX57 : Endo-xylogalacturonan hydrolase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of xylogalacturonate (XGA), a chain of α-(1 → 4)-linked d-galacturonic acid, which is substituted with β-d-xylose at the O-3 position, by cleaving its α-(1 → 4)-linkage.<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
EC 3.2.1.-<br />
<br />
PMID:10618200<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX58 : Exo-β-glucosaminidase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalyze the hydrolysis of chitosan or chitosan oligosaccharides to remove successive D-glucosamine residues from the non-reducing termini<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
EC 3.2.1.165<br />
<br />
PMID: 16349528, 16316314, 16636831<br />
<br />
[GOC:MENGO_EP]<br />
<br />
====GO:XXXXXX59 : Type C lysozyme activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalyze the hydrolysis hydrolysis of 1,4-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues in a peptidoglycan and between N-acetyl-D-glucosamine residues in chitodextrins. C-type lysozymes are closely related to alpha-lactalbumin in sequence and structure. <br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
EC 3.2.1.17<br />
<br />
PMID: 8765309, 20420912<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX60 : Type i (invertebrate) lysozyme activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalyze the hydrolysis hydrolysis of 1,4-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues in a peptidoglycan and between N-acetyl-D-glucosamine residues in chitodextrins. <br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
EC 3.2.1.17<br />
<br />
PMID: 11965437<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX61 : Maltopentaose-forming α-amylase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of alpha-bonds of large alpha-linked polysaccharides such as starch and glycogen, yielding maltopentaose.<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
EC EC 3.2.1.1 <br />
<br />
PMID:1368136, 1714389<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX62 : Maltotriose-forming α-amylase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of alpha-bonds of large alpha-linked polysaccharides such as starch and glycogen, yielding maltotriose.<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
EC 3.2.1.116<br />
<br />
PMID: 7511484, 9406414<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX63 : Mannosyl-oligosaccharide α-1,3-mannosidase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of alpha-1,3-bonds of mannosyl-oligosaccharide<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
EC EC 3.2.1.-<br />
<br />
PMID: 2338081, 1849817<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX64 : Mannosyl-oligosaccharide α-1,6-mannosidase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of alpha-1,6-bonds of mannosyl-oligosaccharide<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds<br />
<br />
EC EC 3.2.1.-<br />
<br />
PMID: 2338081, 1849817<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX65 : Reuteransucrase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the synthesis of reuteransucrase a unique soluble glucan (reuteran) with mainly alpha-(1-->4) glucosidic linkages. <br />
<br />
is_a : GO:0016758 ! Transferase activity, transferring hexosyl groups <br />
<br />
EC 2.4.1.-<br />
<br />
PMID: 15256553, 16000808<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX66 : Rhamnogalacturonan α-L-rhamnopyranohydrolase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of terminal non-reducing alpha-L-rhamnose residues in rhamnogalaturonan<br />
<br />
is_a : GO:0016758 ! Transferase activity, transferring hexosyl groups <br />
<br />
EC 3.2.1.40<br />
<br />
PMID:7972516<br />
<br />
[GOC:MENGO_EP]</div>
Epurwant
https://wiki.geneontology.org/index.php?title=MENGO_Enzyme_activity&diff=35922
MENGO Enzyme activity
2011-06-14T17:42:22Z
<p>Epurwant: </p>
<hr />
<div>Working Group Members<br />
*<br />
*<br />
*<br />
*<br />
<br />
==Trudy_5/10/11==<br />
<br />
===MOLECULAR FUNCTION ONTOLOGY===<br />
<br />
====GO:XXXXXX14:hemicellulase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalysis of the breakdown of hemicellulose, a plant cell wall polysaccharidesthat have a backbone of 1,4-linked beta-D-pyranosyl residues in which O4 is in the equatorial orientation<br />
<br />
is_a : GO:0016787: hydrolase activity<br />
<br />
[GOC:MENGO_TT]<br />
<br />
====GO:XXXXXX15:exo-1,4-β-d- xylanases activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalysis of the hydrolysis of (1→4)-β-D-xylans, to remove successive D-xylose residues from the non-reducing termini<br />
<br />
is_a :GO:004553 hydrolase activity, hydrolyzing O-glycosyl compounds<br />
<br />
[GOC:MENGO_TT]<br />
<br />
====GO:XXXXXX16:1,4-β-d- mannosidase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalysis of the hydrolysis of 1,4-beta-D-mannosidic linkages in mannans, galactomannans and glucomannans<br />
<br />
is_a :GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds<br />
<br />
[GOC:MENGO_TT]<br />
<br />
==== GO:XXXXXX143:sinapyl alcohol dehydrogenase activity====<br />
<br />
namespace: molecular function<br />
<br />
def: catalysis of the reduction of hydroxycinnamaldehydes<br />
<br />
is_a: GO:0003824 catalytic activity<br />
<br />
synonym: SAD activity<br />
[GOC:MENGO_TT]<br />
<br />
<br />
==Endang_05/26/11==<br />
<br />
===Polysaccharide Lyase===<br />
<br />
====GO:XXXXXX43 : Acharan sulfate lyase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the cleavage of a carbon-oxygen bond of acharan sulfate, a uniformly repeating disaccharide structure of α-d-n-acetylglucosaminyl-2-O-sulfo-α-l-iduronic acid, by the elimination of a alcohol.<br />
<br />
is_a : GO:0016835! carbon-oxygen lyase activity<br />
<br />
[GOC:MENGO_EP]<br />
<br />
====GO:XXXXXX44 : Exooligoalginate lyase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the cleavage of a carbon-oxygen bond by the elimination of an alcohol from an oligoalginate<br />
<br />
is_a : GO:0016835! carbon-oxygen lyase activity<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX45 : Gellan lyase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the cleavage of a carbon-oxygen bond by the elimination of an alcohol from a gellan, a linear repeating tetrasaccharide ->3-beta-D-Glc-(134)-beta-D-GlcA-(134)-beta-D-Glc-(134)-alpha-L-Rha-(13] composed of D-glucose (Glc), D-glucuronic acid (GlcA), and L-rhamnose (Rha).<br />
<br />
is_a : GO:0016835! carbon-oxygen lyase activity<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX46 : Ulvan lyase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the cleavage of a carbon-oxygen bond by the elimination of an alcohol from ulvan, a repeating structure of ->4)-beta-D-GlcA-(1,4)-alpha-L-Rha 3S-(1,4)-alpha-L-IdoA-(1,4)-alpha-L-Rha 3S-(1-><br />
<br />
is_a : GO:0016835! carbon-oxygen lyase activity<br />
<br />
[GOC:MENGO_EP<br />
<br />
<br />
===Carbohydrate Esterase===<br />
<br />
====GO:XXXXXX37 : 4-O-methyl-glucuronoyl methylesterase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of a 4-O-methyl-D-glucuronoic acid to give methanol and glucuronic acid<br />
<br />
is_a : GO:0052689! carboxylic ester hydrolase<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX38 : Brefeldin A esterase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of brefeldin A (γ,4- dihydroxy- 2-(6-hydroxy-1-heptenyl)- 4-cyclopentanecrotonic acid λ-lactone) to give brefeldin A acid <br />
<br />
is_a : GO:0052689! carboxylic ester hydrolase<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX39 : Chitooligosaccharide deacetylase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of chitooligosaccharide deacetylase to give oligochitosan and acetic acid<br />
<br />
is_a : GO:0052689! carboxylic ester hydrolase<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX40 : Diacetylchitobiose deacetylase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of a diacetylchitobiose ester to give chitobiose and acetic acid<br />
<br />
is_a : GO:0052689! carboxylic ester hydrolase<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX41 : N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-α-D-glucopyranoside deacetylase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-α-D-glucopyranoside ester to give 1-D-myo-inosityl-2-amino-2-deoxy-α-D-glucopyranoside and acetic acid<br />
<br />
is_a : GO:0052689! carboxylic ester hydrolase<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
<br />
====GO:XXXXXX42 : Pectin acetylesterase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of pectin acetyl ester to give pectate and ethanol<br />
<br />
is_a : GO:0052689! carboxylic ester hydrolase<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
<br />
===Glycoside Hydrolase===<br />
<br />
====GO:XXXXXX47 : 2-keto-3-deoxynononic acid sialidase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of of the glycosidic linkage of 2-keto-3-deoxynononic acid<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
[GOC:MENGO_EP]<br />
<br />
====GO:XXXXXX48 : Amylopullulanase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalysis of the hydrolysis of the α-1,4 glycosidic linkage of amylopullulanase====<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds<br />
<br />
PMID: 10091322, 19111640 <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX49 : Baicalin beta-D-glucuronidase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of baicalin ((2S,3S,4S,5R,6S)-6-(5,6-dihydroxy-4-oxo-2-phenyl-chromen-7-yl)oxy-3,4,5-trihydroxy-tetrahydropyran-2-carboxylic acid) to baicalein and D-glucuronate <br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
(EC 3.2.1.167)<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX50 : Chitobiose phosphorylase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of chitobiose phosphate to chitobiose and phosphate<br />
<br />
is_a : GO:000464! phosphorylase activity <br />
<br />
(EC 2.4.1.-)<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX51 : Chondroitin hydrolase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of chodroitin, a linear polymer structure composed of the repeating disaccharide unit –4GlcUA1-3GalNAc1–, where GlcUA represents D-glucuronic acid and GalNAc represents N-acetyl-D-galactosaminet. <br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
(EC 2.4.1.-)<br />
<br />
PMID:18390555<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX52 : Concanavalin B activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Concanavalin B is a glycoside hydrolases that are both catalytically active chitinases (EC 3.2.1.14) and endo-β-N-acetylglucosaminidases (EC 3.2.1.96) and also sub-families of non-hydrolytic proteins that function as carbohydrate binding modules / "lectins" or as xylanase inhibitors.<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
(EC 3.2.1.14) and (EC 3.2.1.96)<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX53 : Narbonin activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: is a glycoside hydrolases that is predicted to have chitinases (EC 3.2.1.14) activity<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
(EC 3.2.1.14)<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX54 : d-4,5 unsaturated β-glucuronyl hydrolase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of d-4,5 unsaturated β-glucuronate. <br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
EC 3.2.1.-<br />
<br />
PMID:12729728<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX55 : Endo-processive cellulases activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of cellulose and the degradation of the cellulose chain continue after an initial endohydrolase-attack. This enzyme family are inverting glycosidases, which preferentially attack the reducing end of the substrate.<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds<br />
<br />
EC 3.2.1.-<br />
<br />
PMID: 18035374<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX56 : Endorhamnosidase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of rhamnose by cleaving its α-L-1,3 linkage <br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds<br />
<br />
EC 3.2.1.-<br />
<br />
PMID: 383902, 10439404 <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX57 : Endo-xylogalacturonan hydrolase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of xylogalacturonate (XGA), a chain of α-(1 → 4)-linked d-galacturonic acid, which is substituted with β-d-xylose at the O-3 position, by cleaving its α-(1 → 4)-linkage.<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
EC 3.2.1.-<br />
<br />
PMID:10618200<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX58 : Exo-β-glucosaminidase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalyze the hydrolysis of chitosan or chitosan oligosaccharides to remove successive D-glucosamine residues from the non-reducing termini<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
EC 3.2.1.165<br />
<br />
PMID: 16349528, 16316314, 16636831<br />
<br />
[GOC:MENGO_EP]<br />
<br />
====GO:XXXXXX59 : Type C lysozyme activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalyze the hydrolysis hydrolysis of 1,4-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues in a peptidoglycan and between N-acetyl-D-glucosamine residues in chitodextrins. C-type lysozymes are closely related to alpha-lactalbumin in sequence and structure. <br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
EC 3.2.1.17<br />
<br />
PMID: 8765309, 20420912<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX60 : Type i (invertebrate) lysozyme activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalyze the hydrolysis hydrolysis of 1,4-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues in a peptidoglycan and between N-acetyl-D-glucosamine residues in chitodextrins. <br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
EC 3.2.1.17<br />
<br />
PMID: 11965437<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX61 : Maltopentaose-forming α-amylase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of alpha-bonds of large alpha-linked polysaccharides such as starch and glycogen, yielding maltopentaose.<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
EC EC 3.2.1.1 <br />
<br />
PMID:1368136, 1714389<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX62 : Maltotriose-forming α-amylase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of alpha-bonds of large alpha-linked polysaccharides such as starch and glycogen, yielding maltotriose.<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
EC 3.2.1.116<br />
<br />
PMID: 7511484, 9406414<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX63 : Mannosyl-oligosaccharide α-1,3-mannosidase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of alpha-1,3-bonds of mannosyl-oligosaccharide<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
EC EC 3.2.1.-<br />
<br />
PMID: 2338081, 1849817<br />
<br />
[GOC:MENGO_EP]</div>
Epurwant
https://wiki.geneontology.org/index.php?title=MENGO_Enzyme_activity&diff=35921
MENGO Enzyme activity
2011-06-14T17:38:31Z
<p>Epurwant: </p>
<hr />
<div>Working Group Members<br />
*<br />
*<br />
*<br />
*<br />
<br />
==Trudy_5/10/11==<br />
<br />
===MOLECULAR FUNCTION ONTOLOGY===<br />
<br />
====GO:XXXXXX14:hemicellulase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalysis of the breakdown of hemicellulose, a plant cell wall polysaccharidesthat have a backbone of 1,4-linked beta-D-pyranosyl residues in which O4 is in the equatorial orientation<br />
<br />
is_a : GO:0016787: hydrolase activity<br />
<br />
[GOC:MENGO_TT]<br />
<br />
====GO:XXXXXX15:exo-1,4-β-d- xylanases activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalysis of the hydrolysis of (1→4)-β-D-xylans, to remove successive D-xylose residues from the non-reducing termini<br />
<br />
is_a :GO:004553 hydrolase activity, hydrolyzing O-glycosyl compounds<br />
<br />
[GOC:MENGO_TT]<br />
<br />
====GO:XXXXXX16:1,4-β-d- mannosidase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalysis of the hydrolysis of 1,4-beta-D-mannosidic linkages in mannans, galactomannans and glucomannans<br />
<br />
is_a :GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds<br />
<br />
[GOC:MENGO_TT]<br />
<br />
==== GO:XXXXXX143:sinapyl alcohol dehydrogenase activity====<br />
<br />
namespace: molecular function<br />
<br />
def: catalysis of the reduction of hydroxycinnamaldehydes<br />
<br />
is_a: GO:0003824 catalytic activity<br />
<br />
synonym: SAD activity<br />
[GOC:MENGO_TT]<br />
<br />
<br />
==Endang_05/26/11==<br />
<br />
===Polysaccharide Lyase===<br />
<br />
====GO:XXXXXX43 : Acharan sulfate lyase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the cleavage of a carbon-oxygen bond of acharan sulfate, a uniformly repeating disaccharide structure of α-d-n-acetylglucosaminyl-2-O-sulfo-α-l-iduronic acid, by the elimination of a alcohol.<br />
<br />
is_a : GO:0016835! carbon-oxygen lyase activity<br />
<br />
[GOC:MENGO_EP]<br />
<br />
====GO:XXXXXX44 : Exooligoalginate lyase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the cleavage of a carbon-oxygen bond by the elimination of an alcohol from an oligoalginate<br />
<br />
is_a : GO:0016835! carbon-oxygen lyase activity<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX45 : Gellan lyase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the cleavage of a carbon-oxygen bond by the elimination of an alcohol from a gellan, a linear repeating tetrasaccharide ->3-beta-D-Glc-(134)-beta-D-GlcA-(134)-beta-D-Glc-(134)-alpha-L-Rha-(13] composed of D-glucose (Glc), D-glucuronic acid (GlcA), and L-rhamnose (Rha).<br />
<br />
is_a : GO:0016835! carbon-oxygen lyase activity<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX46 : Ulvan lyase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the cleavage of a carbon-oxygen bond by the elimination of an alcohol from ulvan, a repeating structure of ->4)-beta-D-GlcA-(1,4)-alpha-L-Rha 3S-(1,4)-alpha-L-IdoA-(1,4)-alpha-L-Rha 3S-(1-><br />
<br />
is_a : GO:0016835! carbon-oxygen lyase activity<br />
<br />
[GOC:MENGO_EP<br />
<br />
<br />
===Carbohydrate Esterase===<br />
<br />
====GO:XXXXXX37 : 4-O-methyl-glucuronoyl methylesterase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of a 4-O-methyl-D-glucuronoic acid to give methanol and glucuronic acid<br />
<br />
is_a : GO:0052689! carboxylic ester hydrolase<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX38 : Brefeldin A esterase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of brefeldin A (γ,4- dihydroxy- 2-(6-hydroxy-1-heptenyl)- 4-cyclopentanecrotonic acid λ-lactone) to give brefeldin A acid <br />
<br />
is_a : GO:0052689! carboxylic ester hydrolase<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX39 : Chitooligosaccharide deacetylase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of chitooligosaccharide deacetylase to give oligochitosan and acetic acid<br />
<br />
is_a : GO:0052689! carboxylic ester hydrolase<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX40 : Diacetylchitobiose deacetylase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of a diacetylchitobiose ester to give chitobiose and acetic acid<br />
<br />
is_a : GO:0052689! carboxylic ester hydrolase<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX41 : N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-α-D-glucopyranoside deacetylase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-α-D-glucopyranoside ester to give 1-D-myo-inosityl-2-amino-2-deoxy-α-D-glucopyranoside and acetic acid<br />
<br />
is_a : GO:0052689! carboxylic ester hydrolase<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
<br />
====GO:XXXXXX42 : Pectin acetylesterase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of pectin acetyl ester to give pectate and ethanol<br />
<br />
is_a : GO:0052689! carboxylic ester hydrolase<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
<br />
===Glycoside Hydrolase===<br />
<br />
====GO:XXXXXX47 : 2-keto-3-deoxynononic acid sialidase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of of the glycosidic linkage of 2-keto-3-deoxynononic acid<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
[GOC:MENGO_EP]<br />
<br />
====GO:XXXXXX48 : Amylopullulanase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalysis of the hydrolysis of the α-1,4 glycosidic linkage of amylopullulanase====<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds<br />
<br />
PMID: 10091322, 19111640 <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX49 : Baicalin beta-D-glucuronidase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of baicalin ((2S,3S,4S,5R,6S)-6-(5,6-dihydroxy-4-oxo-2-phenyl-chromen-7-yl)oxy-3,4,5-trihydroxy-tetrahydropyran-2-carboxylic acid) to baicalein and D-glucuronate <br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
(EC 3.2.1.167)<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX50 : Chitobiose phosphorylase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of chitobiose phosphate to chitobiose and phosphate<br />
<br />
is_a : GO:000464! phosphorylase activity <br />
<br />
(EC 2.4.1.-)<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX51 : Chondroitin hydrolase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of chodroitin, a linear polymer structure composed of the repeating disaccharide unit –4GlcUA1-3GalNAc1–, where GlcUA represents D-glucuronic acid and GalNAc represents N-acetyl-D-galactosaminet. <br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
(EC 2.4.1.-)<br />
<br />
PMID:18390555<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX52 : Concanavalin B activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Concanavalin B is a glycoside hydrolases that are both catalytically active chitinases (EC 3.2.1.14) and endo-β-N-acetylglucosaminidases (EC 3.2.1.96) and also sub-families of non-hydrolytic proteins that function as carbohydrate binding modules / "lectins" or as xylanase inhibitors.<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
(EC 3.2.1.14) and (EC 3.2.1.96)<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX53 : Narbonin activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: is a glycoside hydrolases that is predicted to have chitinases (EC 3.2.1.14) activity<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
(EC 3.2.1.14)<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX54 : d-4,5 unsaturated β-glucuronyl hydrolase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of d-4,5 unsaturated β-glucuronate. <br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
EC 3.2.1.-<br />
<br />
PMID:12729728<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX55 : Endo-processive cellulases activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of cellulose and the degradation of the cellulose chain continue after an initial endohydrolase-attack. This enzyme family are inverting glycosidases, which preferentially attack the reducing end of the substrate.<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds<br />
<br />
EC 3.2.1.-<br />
<br />
PMID: 18035374<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX56 : Endorhamnosidase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of rhamnose by cleaving its α-L-1,3 linkage <br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds<br />
<br />
EC 3.2.1.-<br />
<br />
PMID: 383902, 10439404 <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX57 : Endo-xylogalacturonan hydrolase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of xylogalacturonate (XGA), a chain of α-(1 → 4)-linked d-galacturonic acid, which is substituted with β-d-xylose at the O-3 position, by cleaving its α-(1 → 4)-linkage.<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
EC 3.2.1.-<br />
<br />
PMID:10618200<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX58 : Exo-β-glucosaminidase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalyze the hydrolysis of chitosan or chitosan oligosaccharides to remove successive D-glucosamine residues from the non-reducing termini<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
EC 3.2.1.165<br />
<br />
PMID: 16349528, 16316314, 16636831<br />
<br />
[GOC:MENGO_EP]<br />
<br />
====GO:XXXXXX59 : Type C lysozyme activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalyze the hydrolysis hydrolysis of 1,4-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues in a peptidoglycan and between N-acetyl-D-glucosamine residues in chitodextrins. C-type lysozymes are closely related to alpha-lactalbumin in sequence and structure. <br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
EC 3.2.1.17<br />
<br />
PMID: 8765309, 20420912<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX60 : Type i (invertebrate) lysozyme activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalyze the hydrolysis hydrolysis of 1,4-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues in a peptidoglycan and between N-acetyl-D-glucosamine residues in chitodextrins. <br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
EC 3.2.1.17<br />
<br />
PMID: 11965437<br />
<br />
[GOC:MENGO_EP]</div>
Epurwant
https://wiki.geneontology.org/index.php?title=MENGO_Enzyme_activity&diff=35920
MENGO Enzyme activity
2011-06-14T17:35:35Z
<p>Epurwant: </p>
<hr />
<div>Working Group Members<br />
*<br />
*<br />
*<br />
*<br />
<br />
==Trudy_5/10/11==<br />
<br />
===MOLECULAR FUNCTION ONTOLOGY===<br />
<br />
====GO:XXXXXX14:hemicellulase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalysis of the breakdown of hemicellulose, a plant cell wall polysaccharidesthat have a backbone of 1,4-linked beta-D-pyranosyl residues in which O4 is in the equatorial orientation<br />
<br />
is_a : GO:0016787: hydrolase activity<br />
<br />
[GOC:MENGO_TT]<br />
<br />
====GO:XXXXXX15:exo-1,4-β-d- xylanases activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalysis of the hydrolysis of (1→4)-β-D-xylans, to remove successive D-xylose residues from the non-reducing termini<br />
<br />
is_a :GO:004553 hydrolase activity, hydrolyzing O-glycosyl compounds<br />
<br />
[GOC:MENGO_TT]<br />
<br />
====GO:XXXXXX16:1,4-β-d- mannosidase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalysis of the hydrolysis of 1,4-beta-D-mannosidic linkages in mannans, galactomannans and glucomannans<br />
<br />
is_a :GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds<br />
<br />
[GOC:MENGO_TT]<br />
<br />
==== GO:XXXXXX143:sinapyl alcohol dehydrogenase activity====<br />
<br />
namespace: molecular function<br />
<br />
def: catalysis of the reduction of hydroxycinnamaldehydes<br />
<br />
is_a: GO:0003824 catalytic activity<br />
<br />
synonym: SAD activity<br />
[GOC:MENGO_TT]<br />
<br />
<br />
==Endang_05/26/11==<br />
<br />
===Polysaccharide Lyase===<br />
<br />
====GO:XXXXXX43 : Acharan sulfate lyase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the cleavage of a carbon-oxygen bond of acharan sulfate, a uniformly repeating disaccharide structure of α-d-n-acetylglucosaminyl-2-O-sulfo-α-l-iduronic acid, by the elimination of a alcohol.<br />
<br />
is_a : GO:0016835! carbon-oxygen lyase activity<br />
<br />
[GOC:MENGO_EP]<br />
<br />
====GO:XXXXXX44 : Exooligoalginate lyase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the cleavage of a carbon-oxygen bond by the elimination of an alcohol from an oligoalginate<br />
<br />
is_a : GO:0016835! carbon-oxygen lyase activity<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX45 : Gellan lyase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the cleavage of a carbon-oxygen bond by the elimination of an alcohol from a gellan, a linear repeating tetrasaccharide ->3-beta-D-Glc-(134)-beta-D-GlcA-(134)-beta-D-Glc-(134)-alpha-L-Rha-(13] composed of D-glucose (Glc), D-glucuronic acid (GlcA), and L-rhamnose (Rha).<br />
<br />
is_a : GO:0016835! carbon-oxygen lyase activity<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX46 : Ulvan lyase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the cleavage of a carbon-oxygen bond by the elimination of an alcohol from ulvan, a repeating structure of ->4)-beta-D-GlcA-(1,4)-alpha-L-Rha 3S-(1,4)-alpha-L-IdoA-(1,4)-alpha-L-Rha 3S-(1-><br />
<br />
is_a : GO:0016835! carbon-oxygen lyase activity<br />
<br />
[GOC:MENGO_EP<br />
<br />
<br />
===Carbohydrate Esterase===<br />
<br />
====GO:XXXXXX37 : 4-O-methyl-glucuronoyl methylesterase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of a 4-O-methyl-D-glucuronoic acid to give methanol and glucuronic acid<br />
<br />
is_a : GO:0052689! carboxylic ester hydrolase<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX38 : Brefeldin A esterase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of brefeldin A (γ,4- dihydroxy- 2-(6-hydroxy-1-heptenyl)- 4-cyclopentanecrotonic acid λ-lactone) to give brefeldin A acid <br />
<br />
is_a : GO:0052689! carboxylic ester hydrolase<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX39 : Chitooligosaccharide deacetylase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of chitooligosaccharide deacetylase to give oligochitosan and acetic acid<br />
<br />
is_a : GO:0052689! carboxylic ester hydrolase<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX40 : Diacetylchitobiose deacetylase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of a diacetylchitobiose ester to give chitobiose and acetic acid<br />
<br />
is_a : GO:0052689! carboxylic ester hydrolase<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX41 : N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-α-D-glucopyranoside deacetylase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-α-D-glucopyranoside ester to give 1-D-myo-inosityl-2-amino-2-deoxy-α-D-glucopyranoside and acetic acid<br />
<br />
is_a : GO:0052689! carboxylic ester hydrolase<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
<br />
====GO:XXXXXX42 : Pectin acetylesterase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of pectin acetyl ester to give pectate and ethanol<br />
<br />
is_a : GO:0052689! carboxylic ester hydrolase<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
<br />
===Glycoside Hydrolase===<br />
<br />
====GO:XXXXXX47 : 2-keto-3-deoxynononic acid sialidase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of of the glycosidic linkage of 2-keto-3-deoxynononic acid<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
[GOC:MENGO_EP]<br />
<br />
====GO:XXXXXX48 : Amylopullulanase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalysis of the hydrolysis of the α-1,4 glycosidic linkage of amylopullulanase====<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds<br />
<br />
PMID: 10091322, 19111640 <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX49 : Baicalin beta-D-glucuronidase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of baicalin ((2S,3S,4S,5R,6S)-6-(5,6-dihydroxy-4-oxo-2-phenyl-chromen-7-yl)oxy-3,4,5-trihydroxy-tetrahydropyran-2-carboxylic acid) to baicalein and D-glucuronate <br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
(EC 3.2.1.167)<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX50 : Chitobiose phosphorylase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of chitobiose phosphate to chitobiose and phosphate<br />
<br />
is_a : GO:000464! phosphorylase activity <br />
<br />
(EC 2.4.1.-)<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX51 : Chondroitin hydrolase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of chodroitin, a linear polymer structure composed of the repeating disaccharide unit –4GlcUA1-3GalNAc1–, where GlcUA represents D-glucuronic acid and GalNAc represents N-acetyl-D-galactosaminet. <br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
(EC 2.4.1.-)<br />
<br />
PMID:18390555<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX52 : Concanavalin B activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Concanavalin B is a glycoside hydrolases that are both catalytically active chitinases (EC 3.2.1.14) and endo-β-N-acetylglucosaminidases (EC 3.2.1.96) and also sub-families of non-hydrolytic proteins that function as carbohydrate binding modules / "lectins" or as xylanase inhibitors.<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
(EC 3.2.1.14) and (EC 3.2.1.96)<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX53 : Narbonin activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: is a glycoside hydrolases that is predicted to have chitinases (EC 3.2.1.14) activity<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
(EC 3.2.1.14)<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX54 : d-4,5 unsaturated β-glucuronyl hydrolase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of d-4,5 unsaturated β-glucuronate. <br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
EC 3.2.1.-<br />
<br />
PMID:12729728<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX55 : Endo-processive cellulases activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of cellulose and the degradation of the cellulose chain continue after an initial endohydrolase-attack. This enzyme family are inverting glycosidases, which preferentially attack the reducing end of the substrate.<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds<br />
<br />
EC 3.2.1.-<br />
<br />
PMID: 18035374<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX56 : Endorhamnosidase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of rhamnose by cleaving its α-L-1,3 linkage <br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds<br />
<br />
EC 3.2.1.-<br />
<br />
PMID: 383902, 10439404 <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX57 : Endo-xylogalacturonan hydrolase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of xylogalacturonate (XGA), a chain of α-(1 → 4)-linked d-galacturonic acid, which is substituted with β-d-xylose at the O-3 position, by cleaving its α-(1 → 4)-linkage.<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
EC 3.2.1.-<br />
<br />
PMID:10618200<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX58 : Exo-β-glucosaminidase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalyze the hydrolysis of chitosan or chitosan oligosaccharides to remove successive D-glucosamine residues from the non-reducing termini<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
EC 3.2.1.165<br />
<br />
PMID: 16349528, 16316314, 16636831<br />
<br />
[GOC:MENGO_EP]</div>
Epurwant
https://wiki.geneontology.org/index.php?title=MENGO_Enzyme_activity&diff=35919
MENGO Enzyme activity
2011-06-14T17:33:33Z
<p>Epurwant: </p>
<hr />
<div>Working Group Members<br />
*<br />
*<br />
*<br />
*<br />
<br />
==Trudy_5/10/11==<br />
<br />
===MOLECULAR FUNCTION ONTOLOGY===<br />
<br />
====GO:XXXXXX14:hemicellulase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalysis of the breakdown of hemicellulose, a plant cell wall polysaccharidesthat have a backbone of 1,4-linked beta-D-pyranosyl residues in which O4 is in the equatorial orientation<br />
<br />
is_a : GO:0016787: hydrolase activity<br />
<br />
[GOC:MENGO_TT]<br />
<br />
====GO:XXXXXX15:exo-1,4-β-d- xylanases activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalysis of the hydrolysis of (1→4)-β-D-xylans, to remove successive D-xylose residues from the non-reducing termini<br />
<br />
is_a :GO:004553 hydrolase activity, hydrolyzing O-glycosyl compounds<br />
<br />
[GOC:MENGO_TT]<br />
<br />
====GO:XXXXXX16:1,4-β-d- mannosidase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalysis of the hydrolysis of 1,4-beta-D-mannosidic linkages in mannans, galactomannans and glucomannans<br />
<br />
is_a :GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds<br />
<br />
[GOC:MENGO_TT]<br />
<br />
==== GO:XXXXXX143:sinapyl alcohol dehydrogenase activity====<br />
<br />
namespace: molecular function<br />
<br />
def: catalysis of the reduction of hydroxycinnamaldehydes<br />
<br />
is_a: GO:0003824 catalytic activity<br />
<br />
synonym: SAD activity<br />
[GOC:MENGO_TT]<br />
<br />
<br />
==Endang_05/26/11==<br />
<br />
===Polysaccharide Lyase===<br />
<br />
====GO:XXXXXX43 : Acharan sulfate lyase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the cleavage of a carbon-oxygen bond of acharan sulfate, a uniformly repeating disaccharide structure of α-d-n-acetylglucosaminyl-2-O-sulfo-α-l-iduronic acid, by the elimination of a alcohol.<br />
<br />
is_a : GO:0016835! carbon-oxygen lyase activity<br />
<br />
[GOC:MENGO_EP]<br />
<br />
====GO:XXXXXX44 : Exooligoalginate lyase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the cleavage of a carbon-oxygen bond by the elimination of an alcohol from an oligoalginate<br />
<br />
is_a : GO:0016835! carbon-oxygen lyase activity<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX45 : Gellan lyase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the cleavage of a carbon-oxygen bond by the elimination of an alcohol from a gellan, a linear repeating tetrasaccharide ->3-beta-D-Glc-(134)-beta-D-GlcA-(134)-beta-D-Glc-(134)-alpha-L-Rha-(13] composed of D-glucose (Glc), D-glucuronic acid (GlcA), and L-rhamnose (Rha).<br />
<br />
is_a : GO:0016835! carbon-oxygen lyase activity<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX46 : Ulvan lyase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the cleavage of a carbon-oxygen bond by the elimination of an alcohol from ulvan, a repeating structure of ->4)-beta-D-GlcA-(1,4)-alpha-L-Rha 3S-(1,4)-alpha-L-IdoA-(1,4)-alpha-L-Rha 3S-(1-><br />
<br />
is_a : GO:0016835! carbon-oxygen lyase activity<br />
<br />
[GOC:MENGO_EP<br />
<br />
<br />
===Carbohydrate Esterase===<br />
<br />
====GO:XXXXXX37 : 4-O-methyl-glucuronoyl methylesterase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of a 4-O-methyl-D-glucuronoic acid to give methanol and glucuronic acid<br />
<br />
is_a : GO:0052689! carboxylic ester hydrolase<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX38 : Brefeldin A esterase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of brefeldin A (γ,4- dihydroxy- 2-(6-hydroxy-1-heptenyl)- 4-cyclopentanecrotonic acid λ-lactone) to give brefeldin A acid <br />
<br />
is_a : GO:0052689! carboxylic ester hydrolase<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX39 : Chitooligosaccharide deacetylase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of chitooligosaccharide deacetylase to give oligochitosan and acetic acid<br />
<br />
is_a : GO:0052689! carboxylic ester hydrolase<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX40 : Diacetylchitobiose deacetylase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of a diacetylchitobiose ester to give chitobiose and acetic acid<br />
<br />
is_a : GO:0052689! carboxylic ester hydrolase<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX41 : N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-α-D-glucopyranoside deacetylase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-α-D-glucopyranoside ester to give 1-D-myo-inosityl-2-amino-2-deoxy-α-D-glucopyranoside and acetic acid<br />
<br />
is_a : GO:0052689! carboxylic ester hydrolase<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
<br />
====GO:XXXXXX42 : Pectin acetylesterase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of pectin acetyl ester to give pectate and ethanol<br />
<br />
is_a : GO:0052689! carboxylic ester hydrolase<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
<br />
===Glycoside Hydrolase===<br />
<br />
====GO:XXXXXX47 : 2-keto-3-deoxynononic acid sialidase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of of the glycosidic linkage of 2-keto-3-deoxynononic acid<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
[GOC:MENGO_EP]<br />
<br />
====GO:XXXXXX48 : Amylopullulanase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalysis of the hydrolysis of the α-1,4 glycosidic linkage of amylopullulanase====<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds<br />
<br />
PMID: 10091322, 19111640 <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX49 : Baicalin beta-D-glucuronidase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of baicalin ((2S,3S,4S,5R,6S)-6-(5,6-dihydroxy-4-oxo-2-phenyl-chromen-7-yl)oxy-3,4,5-trihydroxy-tetrahydropyran-2-carboxylic acid) to baicalein and D-glucuronate <br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
(EC 3.2.1.167)<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX50 : Chitobiose phosphorylase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of chitobiose phosphate to chitobiose and phosphate<br />
<br />
is_a : GO:000464! phosphorylase activity <br />
<br />
(EC 2.4.1.-)<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX51 : Chondroitin hydrolase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of chodroitin, a linear polymer structure composed of the repeating disaccharide unit –4GlcUA1-3GalNAc1–, where GlcUA represents D-glucuronic acid and GalNAc represents N-acetyl-D-galactosaminet. <br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
(EC 2.4.1.-)<br />
<br />
PMID:18390555<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX52 : Concanavalin B activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Concanavalin B is a glycoside hydrolases that are both catalytically active chitinases (EC 3.2.1.14) and endo-β-N-acetylglucosaminidases (EC 3.2.1.96) and also sub-families of non-hydrolytic proteins that function as carbohydrate binding modules / "lectins" or as xylanase inhibitors.<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
(EC 3.2.1.14) and (EC 3.2.1.96)<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX53 : Narbonin activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: is a glycoside hydrolases that is predicted to have chitinases (EC 3.2.1.14) activity<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
(EC 3.2.1.14)<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX54 : d-4,5 unsaturated β-glucuronyl hydrolase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of d-4,5 unsaturated β-glucuronate. <br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
EC 3.2.1.-<br />
<br />
PMID:12729728<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX55 : Endo-processive cellulases activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of cellulose and the degradation of the cellulose chain continue after an initial endohydrolase-attack. This enzyme family are inverting glycosidases, which preferentially attack the reducing end of the substrate.<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds<br />
<br />
EC 3.2.1.-<br />
<br />
PMID: 18035374<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX56 : Endorhamnosidase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of rhamnose by cleaving its α-L-1,3 linkage <br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds<br />
<br />
EC 3.2.1.-<br />
<br />
PMID: 383902, 10439404 <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX57 : Endo-xylogalacturonan hydrolase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of xylogalacturonate (XGA), a chain of α-(1 → 4)-linked d-galacturonic acid, which is substituted with β-d-xylose at the O-3 position, by cleaving its α-(1 → 4)-linkage.<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
EC 3.2.1.-<br />
<br />
PMID:10618200<br />
<br />
[GOC:MENGO_EP]</div>
Epurwant
https://wiki.geneontology.org/index.php?title=MENGO_Enzyme_activity&diff=35918
MENGO Enzyme activity
2011-06-14T17:31:35Z
<p>Epurwant: </p>
<hr />
<div>Working Group Members<br />
*<br />
*<br />
*<br />
*<br />
<br />
==Trudy_5/10/11==<br />
<br />
===MOLECULAR FUNCTION ONTOLOGY===<br />
<br />
====GO:XXXXXX14:hemicellulase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalysis of the breakdown of hemicellulose, a plant cell wall polysaccharidesthat have a backbone of 1,4-linked beta-D-pyranosyl residues in which O4 is in the equatorial orientation<br />
<br />
is_a : GO:0016787: hydrolase activity<br />
<br />
[GOC:MENGO_TT]<br />
<br />
====GO:XXXXXX15:exo-1,4-β-d- xylanases activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalysis of the hydrolysis of (1→4)-β-D-xylans, to remove successive D-xylose residues from the non-reducing termini<br />
<br />
is_a :GO:004553 hydrolase activity, hydrolyzing O-glycosyl compounds<br />
<br />
[GOC:MENGO_TT]<br />
<br />
====GO:XXXXXX16:1,4-β-d- mannosidase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalysis of the hydrolysis of 1,4-beta-D-mannosidic linkages in mannans, galactomannans and glucomannans<br />
<br />
is_a :GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds<br />
<br />
[GOC:MENGO_TT]<br />
<br />
==== GO:XXXXXX143:sinapyl alcohol dehydrogenase activity====<br />
<br />
namespace: molecular function<br />
<br />
def: catalysis of the reduction of hydroxycinnamaldehydes<br />
<br />
is_a: GO:0003824 catalytic activity<br />
<br />
synonym: SAD activity<br />
[GOC:MENGO_TT]<br />
<br />
<br />
==Endang_05/26/11==<br />
<br />
===Polysaccharide Lyase===<br />
<br />
====GO:XXXXXX43 : Acharan sulfate lyase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the cleavage of a carbon-oxygen bond of acharan sulfate, a uniformly repeating disaccharide structure of α-d-n-acetylglucosaminyl-2-O-sulfo-α-l-iduronic acid, by the elimination of a alcohol.<br />
<br />
is_a : GO:0016835! carbon-oxygen lyase activity<br />
<br />
[GOC:MENGO_EP]<br />
<br />
====GO:XXXXXX44 : Exooligoalginate lyase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the cleavage of a carbon-oxygen bond by the elimination of an alcohol from an oligoalginate<br />
<br />
is_a : GO:0016835! carbon-oxygen lyase activity<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX45 : Gellan lyase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the cleavage of a carbon-oxygen bond by the elimination of an alcohol from a gellan, a linear repeating tetrasaccharide ->3-beta-D-Glc-(134)-beta-D-GlcA-(134)-beta-D-Glc-(134)-alpha-L-Rha-(13] composed of D-glucose (Glc), D-glucuronic acid (GlcA), and L-rhamnose (Rha).<br />
<br />
is_a : GO:0016835! carbon-oxygen lyase activity<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX46 : Ulvan lyase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the cleavage of a carbon-oxygen bond by the elimination of an alcohol from ulvan, a repeating structure of ->4)-beta-D-GlcA-(1,4)-alpha-L-Rha 3S-(1,4)-alpha-L-IdoA-(1,4)-alpha-L-Rha 3S-(1-><br />
<br />
is_a : GO:0016835! carbon-oxygen lyase activity<br />
<br />
[GOC:MENGO_EP<br />
<br />
<br />
===Carbohydrate Esterase===<br />
<br />
====GO:XXXXXX37 : 4-O-methyl-glucuronoyl methylesterase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of a 4-O-methyl-D-glucuronoic acid to give methanol and glucuronic acid<br />
<br />
is_a : GO:0052689! carboxylic ester hydrolase<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX38 : Brefeldin A esterase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of brefeldin A (γ,4- dihydroxy- 2-(6-hydroxy-1-heptenyl)- 4-cyclopentanecrotonic acid λ-lactone) to give brefeldin A acid <br />
<br />
is_a : GO:0052689! carboxylic ester hydrolase<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX39 : Chitooligosaccharide deacetylase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of chitooligosaccharide deacetylase to give oligochitosan and acetic acid<br />
<br />
is_a : GO:0052689! carboxylic ester hydrolase<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX40 : Diacetylchitobiose deacetylase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of a diacetylchitobiose ester to give chitobiose and acetic acid<br />
<br />
is_a : GO:0052689! carboxylic ester hydrolase<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX41 : N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-α-D-glucopyranoside deacetylase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-α-D-glucopyranoside ester to give 1-D-myo-inosityl-2-amino-2-deoxy-α-D-glucopyranoside and acetic acid<br />
<br />
is_a : GO:0052689! carboxylic ester hydrolase<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
<br />
====GO:XXXXXX42 : Pectin acetylesterase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of pectin acetyl ester to give pectate and ethanol<br />
<br />
is_a : GO:0052689! carboxylic ester hydrolase<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
<br />
===Glycoside Hydrolase===<br />
<br />
====GO:XXXXXX47 : 2-keto-3-deoxynononic acid sialidase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of of the glycosidic linkage of 2-keto-3-deoxynononic acid<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
[GOC:MENGO_EP]<br />
<br />
====GO:XXXXXX48 : Amylopullulanase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalysis of the hydrolysis of the α-1,4 glycosidic linkage of amylopullulanase====<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds<br />
<br />
PMID: 10091322, 19111640 <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX49 : Baicalin beta-D-glucuronidase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of baicalin ((2S,3S,4S,5R,6S)-6-(5,6-dihydroxy-4-oxo-2-phenyl-chromen-7-yl)oxy-3,4,5-trihydroxy-tetrahydropyran-2-carboxylic acid) to baicalein and D-glucuronate <br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
(EC 3.2.1.167)<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX50 : Chitobiose phosphorylase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of chitobiose phosphate to chitobiose and phosphate<br />
<br />
is_a : GO:000464! phosphorylase activity <br />
<br />
(EC 2.4.1.-)<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX51 : Chondroitin hydrolase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of chodroitin, a linear polymer structure composed of the repeating disaccharide unit –4GlcUA1-3GalNAc1–, where GlcUA represents D-glucuronic acid and GalNAc represents N-acetyl-D-galactosaminet. <br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
(EC 2.4.1.-)<br />
<br />
PMID:18390555<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX52 : Concanavalin B activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Concanavalin B is a glycoside hydrolases that are both catalytically active chitinases (EC 3.2.1.14) and endo-β-N-acetylglucosaminidases (EC 3.2.1.96) and also sub-families of non-hydrolytic proteins that function as carbohydrate binding modules / "lectins" or as xylanase inhibitors.<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
(EC 3.2.1.14) and (EC 3.2.1.96)<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX53 : Narbonin activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: is a glycoside hydrolases that is predicted to have chitinases (EC 3.2.1.14) activity<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
(EC 3.2.1.14)<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX54 : d-4,5 unsaturated β-glucuronyl hydrolase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of d-4,5 unsaturated β-glucuronate. <br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
EC 3.2.1.-<br />
<br />
PMID:12729728<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX55 : Endo-processive cellulases activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of cellulose and the degradation of the cellulose chain continue after an initial endohydrolase-attack. This enzyme family are inverting glycosidases, which preferentially attack the reducing end of the substrate.<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds<br />
<br />
EC 3.2.1.-<br />
<br />
PMID: 18035374<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX56 : Endorhamnosidase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of rhamnose by cleaving its α-L-1,3 linkage <br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds<br />
<br />
EC 3.2.1.-<br />
<br />
PMID: 383902, 10439404 <br />
<br />
[GOC:MENGO_EP]</div>
Epurwant
https://wiki.geneontology.org/index.php?title=MENGO_Enzyme_activity&diff=35917
MENGO Enzyme activity
2011-06-14T17:29:23Z
<p>Epurwant: </p>
<hr />
<div>Working Group Members<br />
*<br />
*<br />
*<br />
*<br />
<br />
==Trudy_5/10/11==<br />
<br />
===MOLECULAR FUNCTION ONTOLOGY===<br />
<br />
====GO:XXXXXX14:hemicellulase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalysis of the breakdown of hemicellulose, a plant cell wall polysaccharidesthat have a backbone of 1,4-linked beta-D-pyranosyl residues in which O4 is in the equatorial orientation<br />
<br />
is_a : GO:0016787: hydrolase activity<br />
<br />
[GOC:MENGO_TT]<br />
<br />
====GO:XXXXXX15:exo-1,4-β-d- xylanases activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalysis of the hydrolysis of (1→4)-β-D-xylans, to remove successive D-xylose residues from the non-reducing termini<br />
<br />
is_a :GO:004553 hydrolase activity, hydrolyzing O-glycosyl compounds<br />
<br />
[GOC:MENGO_TT]<br />
<br />
====GO:XXXXXX16:1,4-β-d- mannosidase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalysis of the hydrolysis of 1,4-beta-D-mannosidic linkages in mannans, galactomannans and glucomannans<br />
<br />
is_a :GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds<br />
<br />
[GOC:MENGO_TT]<br />
<br />
==== GO:XXXXXX143:sinapyl alcohol dehydrogenase activity====<br />
<br />
namespace: molecular function<br />
<br />
def: catalysis of the reduction of hydroxycinnamaldehydes<br />
<br />
is_a: GO:0003824 catalytic activity<br />
<br />
synonym: SAD activity<br />
[GOC:MENGO_TT]<br />
<br />
<br />
==Endang_05/26/11==<br />
<br />
===Polysaccharide Lyase===<br />
<br />
====GO:XXXXXX43 : Acharan sulfate lyase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the cleavage of a carbon-oxygen bond of acharan sulfate, a uniformly repeating disaccharide structure of α-d-n-acetylglucosaminyl-2-O-sulfo-α-l-iduronic acid, by the elimination of a alcohol.<br />
<br />
is_a : GO:0016835! carbon-oxygen lyase activity<br />
<br />
[GOC:MENGO_EP]<br />
<br />
====GO:XXXXXX44 : Exooligoalginate lyase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the cleavage of a carbon-oxygen bond by the elimination of an alcohol from an oligoalginate<br />
<br />
is_a : GO:0016835! carbon-oxygen lyase activity<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX45 : Gellan lyase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the cleavage of a carbon-oxygen bond by the elimination of an alcohol from a gellan, a linear repeating tetrasaccharide ->3-beta-D-Glc-(134)-beta-D-GlcA-(134)-beta-D-Glc-(134)-alpha-L-Rha-(13] composed of D-glucose (Glc), D-glucuronic acid (GlcA), and L-rhamnose (Rha).<br />
<br />
is_a : GO:0016835! carbon-oxygen lyase activity<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX46 : Ulvan lyase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the cleavage of a carbon-oxygen bond by the elimination of an alcohol from ulvan, a repeating structure of ->4)-beta-D-GlcA-(1,4)-alpha-L-Rha 3S-(1,4)-alpha-L-IdoA-(1,4)-alpha-L-Rha 3S-(1-><br />
<br />
is_a : GO:0016835! carbon-oxygen lyase activity<br />
<br />
[GOC:MENGO_EP<br />
<br />
<br />
===Carbohydrate Esterase===<br />
<br />
====GO:XXXXXX37 : 4-O-methyl-glucuronoyl methylesterase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of a 4-O-methyl-D-glucuronoic acid to give methanol and glucuronic acid<br />
<br />
is_a : GO:0052689! carboxylic ester hydrolase<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX38 : Brefeldin A esterase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of brefeldin A (γ,4- dihydroxy- 2-(6-hydroxy-1-heptenyl)- 4-cyclopentanecrotonic acid λ-lactone) to give brefeldin A acid <br />
<br />
is_a : GO:0052689! carboxylic ester hydrolase<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX39 : Chitooligosaccharide deacetylase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of chitooligosaccharide deacetylase to give oligochitosan and acetic acid<br />
<br />
is_a : GO:0052689! carboxylic ester hydrolase<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX40 : Diacetylchitobiose deacetylase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of a diacetylchitobiose ester to give chitobiose and acetic acid<br />
<br />
is_a : GO:0052689! carboxylic ester hydrolase<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX41 : N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-α-D-glucopyranoside deacetylase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-α-D-glucopyranoside ester to give 1-D-myo-inosityl-2-amino-2-deoxy-α-D-glucopyranoside and acetic acid<br />
<br />
is_a : GO:0052689! carboxylic ester hydrolase<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
<br />
====GO:XXXXXX42 : Pectin acetylesterase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of pectin acetyl ester to give pectate and ethanol<br />
<br />
is_a : GO:0052689! carboxylic ester hydrolase<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
<br />
===Glycoside Hydrolase===<br />
<br />
====GO:XXXXXX47 : 2-keto-3-deoxynononic acid sialidase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of of the glycosidic linkage of 2-keto-3-deoxynononic acid<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
[GOC:MENGO_EP]<br />
<br />
====GO:XXXXXX48 : Amylopullulanase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalysis of the hydrolysis of the α-1,4 glycosidic linkage of amylopullulanase====<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds<br />
<br />
PMID: 10091322, 19111640 <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX49 : Baicalin beta-D-glucuronidase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of baicalin ((2S,3S,4S,5R,6S)-6-(5,6-dihydroxy-4-oxo-2-phenyl-chromen-7-yl)oxy-3,4,5-trihydroxy-tetrahydropyran-2-carboxylic acid) to baicalein and D-glucuronate <br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
(EC 3.2.1.167)<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX50 : Chitobiose phosphorylase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of chitobiose phosphate to chitobiose and phosphate<br />
<br />
is_a : GO:000464! phosphorylase activity <br />
<br />
(EC 2.4.1.-)<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX51 : Chondroitin hydrolase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of chodroitin, a linear polymer structure composed of the repeating disaccharide unit –4GlcUA1-3GalNAc1–, where GlcUA represents D-glucuronic acid and GalNAc represents N-acetyl-D-galactosaminet. <br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
(EC 2.4.1.-)<br />
<br />
PMID:18390555<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX52 : Concanavalin B activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Concanavalin B is a glycoside hydrolases that are both catalytically active chitinases (EC 3.2.1.14) and endo-β-N-acetylglucosaminidases (EC 3.2.1.96) and also sub-families of non-hydrolytic proteins that function as carbohydrate binding modules / "lectins" or as xylanase inhibitors.<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
(EC 3.2.1.14) and (EC 3.2.1.96)<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX53 : Narbonin activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: is a glycoside hydrolases that is predicted to have chitinases (EC 3.2.1.14) activity<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
(EC 3.2.1.14)<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX54 : d-4,5 unsaturated β-glucuronyl hydrolase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of d-4,5 unsaturated β-glucuronate. <br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
EC 3.2.1.-<br />
<br />
PMID:12729728<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX55 : Endo-processive cellulases activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of cellulose and the degradation of the cellulose chain continue after an initial endohydrolase-attack. This enzyme family are inverting glycosidases, which preferentially attack the reducing end of the substrate.<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds<br />
<br />
EC 3.2.1.-<br />
<br />
PMID: 18035374<br />
<br />
[GOC:MENGO_EP]</div>
Epurwant
https://wiki.geneontology.org/index.php?title=MENGO_Enzyme_activity&diff=35916
MENGO Enzyme activity
2011-06-14T17:27:43Z
<p>Epurwant: </p>
<hr />
<div>Working Group Members<br />
*<br />
*<br />
*<br />
*<br />
<br />
==Trudy_5/10/11==<br />
<br />
===MOLECULAR FUNCTION ONTOLOGY===<br />
<br />
====GO:XXXXXX14:hemicellulase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalysis of the breakdown of hemicellulose, a plant cell wall polysaccharidesthat have a backbone of 1,4-linked beta-D-pyranosyl residues in which O4 is in the equatorial orientation<br />
<br />
is_a : GO:0016787: hydrolase activity<br />
<br />
[GOC:MENGO_TT]<br />
<br />
====GO:XXXXXX15:exo-1,4-β-d- xylanases activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalysis of the hydrolysis of (1→4)-β-D-xylans, to remove successive D-xylose residues from the non-reducing termini<br />
<br />
is_a :GO:004553 hydrolase activity, hydrolyzing O-glycosyl compounds<br />
<br />
[GOC:MENGO_TT]<br />
<br />
====GO:XXXXXX16:1,4-β-d- mannosidase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalysis of the hydrolysis of 1,4-beta-D-mannosidic linkages in mannans, galactomannans and glucomannans<br />
<br />
is_a :GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds<br />
<br />
[GOC:MENGO_TT]<br />
<br />
==== GO:XXXXXX143:sinapyl alcohol dehydrogenase activity====<br />
<br />
namespace: molecular function<br />
<br />
def: catalysis of the reduction of hydroxycinnamaldehydes<br />
<br />
is_a: GO:0003824 catalytic activity<br />
<br />
synonym: SAD activity<br />
[GOC:MENGO_TT]<br />
<br />
<br />
==Endang_05/26/11==<br />
<br />
===Polysaccharide Lyase===<br />
<br />
====GO:XXXXXX43 : Acharan sulfate lyase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the cleavage of a carbon-oxygen bond of acharan sulfate, a uniformly repeating disaccharide structure of α-d-n-acetylglucosaminyl-2-O-sulfo-α-l-iduronic acid, by the elimination of a alcohol.<br />
<br />
is_a : GO:0016835! carbon-oxygen lyase activity<br />
<br />
[GOC:MENGO_EP]<br />
<br />
====GO:XXXXXX44 : Exooligoalginate lyase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the cleavage of a carbon-oxygen bond by the elimination of an alcohol from an oligoalginate<br />
<br />
is_a : GO:0016835! carbon-oxygen lyase activity<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX45 : Gellan lyase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the cleavage of a carbon-oxygen bond by the elimination of an alcohol from a gellan, a linear repeating tetrasaccharide ->3-beta-D-Glc-(134)-beta-D-GlcA-(134)-beta-D-Glc-(134)-alpha-L-Rha-(13] composed of D-glucose (Glc), D-glucuronic acid (GlcA), and L-rhamnose (Rha).<br />
<br />
is_a : GO:0016835! carbon-oxygen lyase activity<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX46 : Ulvan lyase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the cleavage of a carbon-oxygen bond by the elimination of an alcohol from ulvan, a repeating structure of ->4)-beta-D-GlcA-(1,4)-alpha-L-Rha 3S-(1,4)-alpha-L-IdoA-(1,4)-alpha-L-Rha 3S-(1-><br />
<br />
is_a : GO:0016835! carbon-oxygen lyase activity<br />
<br />
[GOC:MENGO_EP<br />
<br />
<br />
===Carbohydrate Esterase===<br />
<br />
====GO:XXXXXX37 : 4-O-methyl-glucuronoyl methylesterase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of a 4-O-methyl-D-glucuronoic acid to give methanol and glucuronic acid<br />
<br />
is_a : GO:0052689! carboxylic ester hydrolase<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX38 : Brefeldin A esterase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of brefeldin A (γ,4- dihydroxy- 2-(6-hydroxy-1-heptenyl)- 4-cyclopentanecrotonic acid λ-lactone) to give brefeldin A acid <br />
<br />
is_a : GO:0052689! carboxylic ester hydrolase<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX39 : Chitooligosaccharide deacetylase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of chitooligosaccharide deacetylase to give oligochitosan and acetic acid<br />
<br />
is_a : GO:0052689! carboxylic ester hydrolase<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX40 : Diacetylchitobiose deacetylase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of a diacetylchitobiose ester to give chitobiose and acetic acid<br />
<br />
is_a : GO:0052689! carboxylic ester hydrolase<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX41 : N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-α-D-glucopyranoside deacetylase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-α-D-glucopyranoside ester to give 1-D-myo-inosityl-2-amino-2-deoxy-α-D-glucopyranoside and acetic acid<br />
<br />
is_a : GO:0052689! carboxylic ester hydrolase<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
<br />
====GO:XXXXXX42 : Pectin acetylesterase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of pectin acetyl ester to give pectate and ethanol<br />
<br />
is_a : GO:0052689! carboxylic ester hydrolase<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
<br />
===Glycoside Hydrolase===<br />
<br />
====GO:XXXXXX47 : 2-keto-3-deoxynononic acid sialidase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of of the glycosidic linkage of 2-keto-3-deoxynononic acid<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
[GOC:MENGO_EP]<br />
<br />
====GO:XXXXXX48 : Amylopullulanase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalysis of the hydrolysis of the α-1,4 glycosidic linkage of amylopullulanase====<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds<br />
<br />
PMID: 10091322, 19111640 <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX49 : Baicalin beta-D-glucuronidase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of baicalin ((2S,3S,4S,5R,6S)-6-(5,6-dihydroxy-4-oxo-2-phenyl-chromen-7-yl)oxy-3,4,5-trihydroxy-tetrahydropyran-2-carboxylic acid) to baicalein and D-glucuronate <br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
(EC 3.2.1.167)<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX50 : Chitobiose phosphorylase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of chitobiose phosphate to chitobiose and phosphate<br />
<br />
is_a : GO:000464! phosphorylase activity <br />
<br />
(EC 2.4.1.-)<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX51 : Chondroitin hydrolase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of chodroitin, a linear polymer structure composed of the repeating disaccharide unit –4GlcUA1-3GalNAc1–, where GlcUA represents D-glucuronic acid and GalNAc represents N-acetyl-D-galactosaminet. <br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
(EC 2.4.1.-)<br />
<br />
PMID:18390555<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX52 : Concanavalin B activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Concanavalin B is a glycoside hydrolases that are both catalytically active chitinases (EC 3.2.1.14) and endo-β-N-acetylglucosaminidases (EC 3.2.1.96) and also sub-families of non-hydrolytic proteins that function as carbohydrate binding modules / "lectins" or as xylanase inhibitors.<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
(EC 3.2.1.14) and (EC 3.2.1.96)<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX53 : Narbonin activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: is a glycoside hydrolases that is predicted to have chitinases (EC 3.2.1.14) activity<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
(EC 3.2.1.14)<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX54 : d-4,5 unsaturated β-glucuronyl hydrolase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of d-4,5 unsaturated β-glucuronate. <br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
EC 3.2.1.-<br />
<br />
PMID:12729728<br />
<br />
[GOC:MENGO_EP]</div>
Epurwant
https://wiki.geneontology.org/index.php?title=MENGO_Enzyme_activity&diff=35915
MENGO Enzyme activity
2011-06-14T17:25:59Z
<p>Epurwant: </p>
<hr />
<div>Working Group Members<br />
*<br />
*<br />
*<br />
*<br />
<br />
==Trudy_5/10/11==<br />
<br />
===MOLECULAR FUNCTION ONTOLOGY===<br />
<br />
====GO:XXXXXX14:hemicellulase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalysis of the breakdown of hemicellulose, a plant cell wall polysaccharidesthat have a backbone of 1,4-linked beta-D-pyranosyl residues in which O4 is in the equatorial orientation<br />
<br />
is_a : GO:0016787: hydrolase activity<br />
<br />
[GOC:MENGO_TT]<br />
<br />
====GO:XXXXXX15:exo-1,4-β-d- xylanases activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalysis of the hydrolysis of (1→4)-β-D-xylans, to remove successive D-xylose residues from the non-reducing termini<br />
<br />
is_a :GO:004553 hydrolase activity, hydrolyzing O-glycosyl compounds<br />
<br />
[GOC:MENGO_TT]<br />
<br />
====GO:XXXXXX16:1,4-β-d- mannosidase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalysis of the hydrolysis of 1,4-beta-D-mannosidic linkages in mannans, galactomannans and glucomannans<br />
<br />
is_a :GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds<br />
<br />
[GOC:MENGO_TT]<br />
<br />
==== GO:XXXXXX143:sinapyl alcohol dehydrogenase activity====<br />
<br />
namespace: molecular function<br />
<br />
def: catalysis of the reduction of hydroxycinnamaldehydes<br />
<br />
is_a: GO:0003824 catalytic activity<br />
<br />
synonym: SAD activity<br />
[GOC:MENGO_TT]<br />
<br />
<br />
==Endang_05/26/11==<br />
<br />
===Polysaccharide Lyase===<br />
<br />
====GO:XXXXXX43 : Acharan sulfate lyase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the cleavage of a carbon-oxygen bond of acharan sulfate, a uniformly repeating disaccharide structure of α-d-n-acetylglucosaminyl-2-O-sulfo-α-l-iduronic acid, by the elimination of a alcohol.<br />
<br />
is_a : GO:0016835! carbon-oxygen lyase activity<br />
<br />
[GOC:MENGO_EP]<br />
<br />
====GO:XXXXXX44 : Exooligoalginate lyase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the cleavage of a carbon-oxygen bond by the elimination of an alcohol from an oligoalginate<br />
<br />
is_a : GO:0016835! carbon-oxygen lyase activity<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX45 : Gellan lyase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the cleavage of a carbon-oxygen bond by the elimination of an alcohol from a gellan, a linear repeating tetrasaccharide ->3-beta-D-Glc-(134)-beta-D-GlcA-(134)-beta-D-Glc-(134)-alpha-L-Rha-(13] composed of D-glucose (Glc), D-glucuronic acid (GlcA), and L-rhamnose (Rha).<br />
<br />
is_a : GO:0016835! carbon-oxygen lyase activity<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX46 : Ulvan lyase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the cleavage of a carbon-oxygen bond by the elimination of an alcohol from ulvan, a repeating structure of ->4)-beta-D-GlcA-(1,4)-alpha-L-Rha 3S-(1,4)-alpha-L-IdoA-(1,4)-alpha-L-Rha 3S-(1-><br />
<br />
is_a : GO:0016835! carbon-oxygen lyase activity<br />
<br />
[GOC:MENGO_EP<br />
<br />
<br />
===Carbohydrate Esterase===<br />
<br />
====GO:XXXXXX37 : 4-O-methyl-glucuronoyl methylesterase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of a 4-O-methyl-D-glucuronoic acid to give methanol and glucuronic acid<br />
<br />
is_a : GO:0052689! carboxylic ester hydrolase<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX38 : Brefeldin A esterase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of brefeldin A (γ,4- dihydroxy- 2-(6-hydroxy-1-heptenyl)- 4-cyclopentanecrotonic acid λ-lactone) to give brefeldin A acid <br />
<br />
is_a : GO:0052689! carboxylic ester hydrolase<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX39 : Chitooligosaccharide deacetylase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of chitooligosaccharide deacetylase to give oligochitosan and acetic acid<br />
<br />
is_a : GO:0052689! carboxylic ester hydrolase<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX40 : Diacetylchitobiose deacetylase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of a diacetylchitobiose ester to give chitobiose and acetic acid<br />
<br />
is_a : GO:0052689! carboxylic ester hydrolase<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX41 : N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-α-D-glucopyranoside deacetylase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-α-D-glucopyranoside ester to give 1-D-myo-inosityl-2-amino-2-deoxy-α-D-glucopyranoside and acetic acid<br />
<br />
is_a : GO:0052689! carboxylic ester hydrolase<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
<br />
====GO:XXXXXX42 : Pectin acetylesterase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of pectin acetyl ester to give pectate and ethanol<br />
<br />
is_a : GO:0052689! carboxylic ester hydrolase<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
<br />
===Glycoside Hydrolase===<br />
<br />
====GO:XXXXXX47 : 2-keto-3-deoxynononic acid sialidase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of of the glycosidic linkage of 2-keto-3-deoxynononic acid<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
[GOC:MENGO_EP]<br />
<br />
====GO:XXXXXX48 : Amylopullulanase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalysis of the hydrolysis of the α-1,4 glycosidic linkage of amylopullulanase====<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds<br />
<br />
PMID: 10091322, 19111640 <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX49 : Baicalin beta-D-glucuronidase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of baicalin ((2S,3S,4S,5R,6S)-6-(5,6-dihydroxy-4-oxo-2-phenyl-chromen-7-yl)oxy-3,4,5-trihydroxy-tetrahydropyran-2-carboxylic acid) to baicalein and D-glucuronate <br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
(EC 3.2.1.167)<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX50 : Chitobiose phosphorylase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of chitobiose phosphate to chitobiose and phosphate<br />
<br />
is_a : GO:000464! phosphorylase activity <br />
<br />
(EC 2.4.1.-)<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX51 : Chondroitin hydrolase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of chodroitin, a linear polymer structure composed of the repeating disaccharide unit –4GlcUA1-3GalNAc1–, where GlcUA represents D-glucuronic acid and GalNAc represents N-acetyl-D-galactosaminet. <br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
(EC 2.4.1.-)<br />
<br />
PMID:18390555<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX52 : Concanavalin B activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Concanavalin B is a glycoside hydrolases that are both catalytically active chitinases (EC 3.2.1.14) and endo-β-N-acetylglucosaminidases (EC 3.2.1.96) and also sub-families of non-hydrolytic proteins that function as carbohydrate binding modules / "lectins" or as xylanase inhibitors.<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
(EC 3.2.1.14) and (EC 3.2.1.96)<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX53 : Narbonin activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: is a glycoside hydrolases that is predicted to have chitinases (EC 3.2.1.14) activity<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
(EC 3.2.1.14)<br />
<br />
[GOC:MENGO_EP]</div>
Epurwant
https://wiki.geneontology.org/index.php?title=MENGO_Enzyme_activity&diff=35914
MENGO Enzyme activity
2011-06-14T17:25:44Z
<p>Epurwant: </p>
<hr />
<div>Working Group Members<br />
*<br />
*<br />
*<br />
*<br />
<br />
==Trudy_5/10/11==<br />
<br />
===MOLECULAR FUNCTION ONTOLOGY===<br />
<br />
====GO:XXXXXX14:hemicellulase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalysis of the breakdown of hemicellulose, a plant cell wall polysaccharidesthat have a backbone of 1,4-linked beta-D-pyranosyl residues in which O4 is in the equatorial orientation<br />
<br />
is_a : GO:0016787: hydrolase activity<br />
<br />
[GOC:MENGO_TT]<br />
<br />
====GO:XXXXXX15:exo-1,4-β-d- xylanases activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalysis of the hydrolysis of (1→4)-β-D-xylans, to remove successive D-xylose residues from the non-reducing termini<br />
<br />
is_a :GO:004553 hydrolase activity, hydrolyzing O-glycosyl compounds<br />
<br />
[GOC:MENGO_TT]<br />
<br />
====GO:XXXXXX16:1,4-β-d- mannosidase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalysis of the hydrolysis of 1,4-beta-D-mannosidic linkages in mannans, galactomannans and glucomannans<br />
<br />
is_a :GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds<br />
<br />
[GOC:MENGO_TT]<br />
<br />
==== GO:XXXXXX143:sinapyl alcohol dehydrogenase activity====<br />
<br />
namespace: molecular function<br />
<br />
def: catalysis of the reduction of hydroxycinnamaldehydes<br />
<br />
is_a: GO:0003824 catalytic activity<br />
<br />
synonym: SAD activity<br />
[GOC:MENGO_TT]<br />
<br />
<br />
==Endang_05/26/11==<br />
<br />
===Polysaccharide Lyase===<br />
<br />
====GO:XXXXXX43 : Acharan sulfate lyase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the cleavage of a carbon-oxygen bond of acharan sulfate, a uniformly repeating disaccharide structure of α-d-n-acetylglucosaminyl-2-O-sulfo-α-l-iduronic acid, by the elimination of a alcohol.<br />
<br />
is_a : GO:0016835! carbon-oxygen lyase activity<br />
<br />
[GOC:MENGO_EP]<br />
<br />
====GO:XXXXXX44 : Exooligoalginate lyase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the cleavage of a carbon-oxygen bond by the elimination of an alcohol from an oligoalginate<br />
<br />
is_a : GO:0016835! carbon-oxygen lyase activity<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX45 : Gellan lyase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the cleavage of a carbon-oxygen bond by the elimination of an alcohol from a gellan, a linear repeating tetrasaccharide ->3-beta-D-Glc-(134)-beta-D-GlcA-(134)-beta-D-Glc-(134)-alpha-L-Rha-(13] composed of D-glucose (Glc), D-glucuronic acid (GlcA), and L-rhamnose (Rha).<br />
<br />
is_a : GO:0016835! carbon-oxygen lyase activity<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX46 : Ulvan lyase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the cleavage of a carbon-oxygen bond by the elimination of an alcohol from ulvan, a repeating structure of ->4)-beta-D-GlcA-(1,4)-alpha-L-Rha 3S-(1,4)-alpha-L-IdoA-(1,4)-alpha-L-Rha 3S-(1-><br />
<br />
is_a : GO:0016835! carbon-oxygen lyase activity<br />
<br />
[GOC:MENGO_EP<br />
<br />
<br />
===Carbohydrate Esterase===<br />
<br />
====GO:XXXXXX37 : 4-O-methyl-glucuronoyl methylesterase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of a 4-O-methyl-D-glucuronoic acid to give methanol and glucuronic acid<br />
<br />
is_a : GO:0052689! carboxylic ester hydrolase<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX38 : Brefeldin A esterase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of brefeldin A (γ,4- dihydroxy- 2-(6-hydroxy-1-heptenyl)- 4-cyclopentanecrotonic acid λ-lactone) to give brefeldin A acid <br />
<br />
is_a : GO:0052689! carboxylic ester hydrolase<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX39 : Chitooligosaccharide deacetylase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of chitooligosaccharide deacetylase to give oligochitosan and acetic acid<br />
<br />
is_a : GO:0052689! carboxylic ester hydrolase<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX40 : Diacetylchitobiose deacetylase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of a diacetylchitobiose ester to give chitobiose and acetic acid<br />
<br />
is_a : GO:0052689! carboxylic ester hydrolase<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX41 : N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-α-D-glucopyranoside deacetylase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-α-D-glucopyranoside ester to give 1-D-myo-inosityl-2-amino-2-deoxy-α-D-glucopyranoside and acetic acid<br />
<br />
is_a : GO:0052689! carboxylic ester hydrolase<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
<br />
====GO:XXXXXX42 : Pectin acetylesterase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of pectin acetyl ester to give pectate and ethanol<br />
<br />
is_a : GO:0052689! carboxylic ester hydrolase<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
<br />
===Glycoside Hydrolase===<br />
<br />
====GO:XXXXXX47 : 2-keto-3-deoxynononic acid sialidase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Catalysis of the hydrolysis of of the glycosidic linkage of 2-keto-3-deoxynononic acid<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
[GOC:MENGO_EP]<br />
<br />
====GO:XXXXXX48 : Amylopullulanase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalysis of the hydrolysis of the α-1,4 glycosidic linkage of amylopullulanase====<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds<br />
<br />
PMID: 10091322, 19111640 <br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX49 : Baicalin beta-D-glucuronidase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of baicalin ((2S,3S,4S,5R,6S)-6-(5,6-dihydroxy-4-oxo-2-phenyl-chromen-7-yl)oxy-3,4,5-trihydroxy-tetrahydropyran-2-carboxylic acid) to baicalein and D-glucuronate <br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
(EC 3.2.1.167)<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX50 : Chitobiose phosphorylase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of chitobiose phosphate to chitobiose and phosphate<br />
<br />
is_a : GO:000464! phosphorylase activity <br />
<br />
(EC 2.4.1.-)<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX51 : Chondroitin hydrolase activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: catalyze the hydrolysis of chodroitin, a linear polymer structure composed of the repeating disaccharide unit –4GlcUA1-3GalNAc1–, where GlcUA represents D-glucuronic acid and GalNAc represents N-acetyl-D-galactosaminet. <br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
(EC 2.4.1.-)<br />
<br />
PMID:18390555<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====GO:XXXXXX52 : Concanavalin B activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: Concanavalin B is a glycoside hydrolases that are both catalytically active chitinases (EC 3.2.1.14) and endo-β-N-acetylglucosaminidases (EC 3.2.1.96) and also sub-families of non-hydrolytic proteins that function as carbohydrate binding modules / "lectins" or as xylanase inhibitors.<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
(EC 3.2.1.14) and (EC 3.2.1.96)<br />
<br />
[GOC:MENGO_EP]<br />
<br />
<br />
====id: GO:XXXXXX53 : Narbonin activity====<br />
<br />
namespace: molecular_function<br />
<br />
def: is a glycoside hydrolases that is predicted to have chitinases (EC 3.2.1.14) activity<br />
<br />
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds <br />
<br />
(EC 3.2.1.14)<br />
<br />
[GOC:MENGO_EP]</div>
Epurwant