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19 March 2024
18 March 2024
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N 18:35 | Annotation Conf. Call 2024-03-19 2 changes history +1,516 [Vanaukenk (2×)] | |||
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18:35 (cur | prev) +530 Vanaukenk talk contribs (→Annotation) | |||
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17:17 (cur | prev) +986 Vanaukenk talk contribs (Created page with "= Agenda and Minutes = == Meetings and Announcements == === Noctua === * Next regularly scheduled Noctua outage: ** Thursday, March 28th, 4-6pm PDT *** [https://github.com/geneontology/noctua/issues/869 Outage tasks] === Next In-Person Consortium Meeting === * Week of May 20th - actual meeting dates: Tuesday, May 21 - Thursday, May 23 * Users Meeting, Monday, May 20th * Hosted by Jim Balhoff in Chapel Hill, NC * Start thinking about [https://docs.google.com/document/d...") |
m 17:15 | Annotation Call 2024 Agenda and Minutes diffhist +39 Vanaukenk talk contribs |
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13:39 | Adding and Removing GO Subsets (Slims) 3 changes history +578 [Sjcarbon; Pascale (2×)] | |||
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13:39 (cur | prev) +85 Pascale talk contribs | |||
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13:12 (cur | prev) +402 Sjcarbon talk contribs (→Removing a subset) | ||||
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04:47 (cur | prev) +91 Pascale talk contribs (→Removing a subset) |
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m 12:40 | Ontology meeting 2024-03-18 3 changes history +290 [Pascale (3×)] | |||
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12:40 (cur | prev) +89 Pascale talk contribs (→Document how to add terms in batch to a do-not-annotate subset directly from the github web interface) | |||
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12:36 (cur | prev) +203 Pascale talk contribs (→ChEBI 7.3 terms) | |||
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12:30 (cur | prev) −2 Pascale talk contribs (→ChEBI 7.3 terms) |
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m 06:08 | Interpretation of Travis checks errors 2 changes history +357 [Pascale (2×)] | |||
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06:08 (cur | prev) +49 Pascale talk contribs | |||
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06:06 (cur | prev) +308 Pascale talk contribs |
06:07 | Upload log Pascale talk contribs uploaded File:Travis error inferences diff.png |
15 March 2024
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m 12:08 | Ontology meeting 2024-03-18 3 changes history +479 [Pascale (3×)] | |||
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12:08 (cur | prev) +365 Pascale talk contribs (→Discussion points) | |||
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08:01 (cur | prev) 0 Pascale talk contribs | |||
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07:53 (cur | prev) +114 Pascale talk contribs (→Using an ensemble of LLMs to evaluate GO-RHEA mappings) |
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m 11:18 | Ontology editors' manual 2 changes history +126 [Pascale (2×)] | |||
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11:18 (cur | prev) +78 Pascale talk contribs (→Useful references) | |||
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05:33 (cur | prev) +48 Pascale talk contribs (→How-to:Protégé instructions) |
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08:35 | LncRNA GO annotation manual 3 changes history −57 [Hla28 (3×)] | |||
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08:35 (cur | prev) +1 Hla28 talk contribs (→Random inactivation of X chromosome) | ||||
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08:35 (cur | prev) −90 Hla28 talk contribs (→Random inactivation of X chromosome) | ||||
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08:33 (cur | prev) +32 Hla28 talk contribs (→DNA-DNA tethering activity) |
m 06:34 | Adding and Removing GO Subsets (Slims) diffhist +1 Pascale talk contribs |
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m 05:57 | GO slim overhaul (completed 2009) 5 changes history +351 [Pascale (5×)] | |||
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05:57 (cur | prev) −3 Pascale talk contribs (→REDONE 2023) | |||
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05:57 (cur | prev) +28 Pascale talk contribs | |||
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05:57 (cur | prev) +14 Pascale talk contribs | |||
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05:56 (cur | prev) +178 Pascale talk contribs | |||
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05:56 (cur | prev) +134 Pascale talk contribs |
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N 05:51 | Procedure to check subset coverage 3 changes history +1,810 [Pascale (3×)] | |||
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05:51 (cur | prev) +220 Pascale talk contribs | |||
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05:47 (cur | prev) +782 Pascale talk contribs | |||
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05:41 (cur | prev) +808 Pascale talk contribs (Created page with "# Checking GO annotation coverage #* Go to [https://www.ebi.ac.uk/QuickGO/ QuickGO], click on [https://www.ebi.ac.uk/QuickGO/annotations View Annotations] #* On the drop down menus at the top of the page, add filters as appropriate: #** Taxon(s) or taxonomic range (it is possible to select for example NBCITaxon:2 for all bacteria) #** Gene Products: it is usually desirable to select only Reviewed entry and Reference proteomes (either "Gene centric, canonical", or "Gene...") |
14 March 2024
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21:04 | Ontology meeting 2024-03-18 2 changes history +604 [RaymondLee (2×)] | |||
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21:04 (cur | prev) −1 RaymondLee talk contribs (→What to do with obsoleted EC xrefs by obsoleted GO terms) | ||||
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21:03 (cur | prev) +605 RaymondLee talk contribs |
13 March 2024
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19:16 | 13 March 2024 PAINT Conference Call 6 changes history +1,479 [Mi (6×)] | |||
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19:16 (cur | prev) +535 Mi talk contribs (→Agenda) | ||||
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18:39 (cur | prev) +37 Mi talk contribs (→GO meeting presentation) | ||||
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18:39 (cur | prev) +781 Mi talk contribs (→"Do not annotate" terms) | ||||
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12:53 (cur | prev) +2 Mi talk contribs (→Do not annotate terms) | ||||
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12:04 (cur | prev) +50 Mi talk contribs | ||||
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11:12 (cur | prev) +74 Mi talk contribs |
m 12:43 | Annotation guidelines diffhist +131 Pascale talk contribs (→General Annotation Documentation) |
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m 11:08 | Projects update meeting 2024-03-13 3 changes history +370 [Pascale (3×)] | |||
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11:08 (cur | prev) +229 Pascale talk contribs (→Discussion topics) | |||
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10:00 (cur | prev) +146 Pascale talk contribs (→Update on projects) | |||
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09:59 (cur | prev) −5 Pascale talk contribs |
m 09:11 | Located in diffhist −1 Pascale talk contribs (→Relations Ontology) |
m 08:59 | Annotation Relations diffhist +1 Pascale talk contribs (→Standard Annotation: Gene Product to Term (gp2term) Relations) |
m 02:25 | Guidelines for database cross references diffhist +517 Pascale talk contribs |
12 March 2024
20:51 | Projects update meeting 2024-03-13 diffhist +40 Sjcarbon talk contribs (→GO meeting) |
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m 11:38 | Annotation Conf. Call 2024-03-12 4 changes history +144 [Vanaukenk (4×)] | |||
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11:38 (cur | prev) +4 Vanaukenk talk contribs (→Attendees) | |||
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11:26 (cur | prev) +122 Vanaukenk talk contribs (→Annotation) | |||
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11:25 (cur | prev) +18 Vanaukenk talk contribs (→Attendees) | |||
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11:24 (cur | prev) 0 Vanaukenk talk contribs (→Change to taxon constraint metadata flag) |