11 MAY 2010 RefGen Phone Conference (Archived)

Present

• GOA: Rachael
• BHF-UCL: Ruth
• MGI: Li,
• RGD: Stan
• Flybase: Susan
• dictyBase: Pascale
• TAIR:
• AgBase: Lakshmi Pillai
• SGD: Rama, Julie
• pombe
• Ecoli:
• Wormbase: Ranjana Kishore, Kimberly Van Auken
• ZFIN:
• PPOD:
• Berkeley: Suzi, Seth

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PAINT-generated GAF file

Samples are avilable for download here:

http://cvsweb.geneontology.org/cgi-bin/cvsweb.cgi/go/gene-associations/submission/paint/

Preparation of GO camp

• Progress by each working group - 5-10 minute summary

1. Regulation : Jane Lomax and Kimberly VanAuken
2. Downstream events: Rachael Huntley and Varsha Khodiyar
3. Protein binding: Ruth Lovering and Ursula Hinz binding discussion
4. Protein complexes: Pascale Gaudet and Bernd Roechert
5. Response to : Rebecca Foulger and Pascale Gaudet
6. Annotation Propagation: Alan Bridge and Paul Thomas
7. HTP: Rama Balakrishnan