11 MAY 2010 RefGen Phone Conference (Archived): Difference between revisions
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http://cvsweb.geneontology.org/cgi-bin/cvsweb.cgi/go/gene-associations/submission/paint/ | http://cvsweb.geneontology.org/cgi-bin/cvsweb.cgi/go/gene-associations/submission/paint/ | ||
* Issue: | * Issue (Doug): many IDs in the 'with' column - this creates a display problem | ||
==Preparation of GO camp== | ==Preparation of GO camp== | ||
Revision as of 14:12, 11 May 2010
Present
- GOA: Rachael
- BHF-UCL: Ruth
- MGI: Li, Mary
- RGD: Stan
- Flybase: Susan
- dictyBase: Pascale
- TAIR: Donghui, Tanya
- AgBase:
- SGD: Rama, Julie
- pombe
- Ecoli:
- Wormbase: Ranjana Kishore, Kimberly Van Auken
- ZFIN: Doug
- PPOD:
- Berkeley: Suzi, Seth
PAINT-generated GAF file
Samples are avilable for download here:
http://cvsweb.geneontology.org/cgi-bin/cvsweb.cgi/go/gene-associations/submission/paint/
- Issue (Doug): many IDs in the 'with' column - this creates a display problem
Preparation of GO camp
- Progress by each working group - 5-10 minute summary
- Regulation : Jane Lomax and Kimberly VanAuken
- Downstream events: Rachael Huntley and Varsha Khodiyar
- Protein binding: Ruth Lovering and Ursula Hinz binding discussion
- Protein complexes: Pascale Gaudet and Bernd Roechert
- Response to : Rebecca Foulger and Pascale Gaudet
- Annotation Propagation: Alan Bridge and Paul Thomas
- HTP: Rama Balakrishnan