12 JAN 2010 RefGen Phone Conference (Archived)

Present

• GOA: Emily
• BHF-UCL: Varsha, Ruth
• MGI: Li, Mary, Judy, David
• RGD:
• Flybase:
• dictyBase: Pascale
• TAIR: Tanya, Donghui
• AgBase:Lakshmi
• SGD: Julie
• pombe
• Ecoli: Jim (arrived late)
• Wormbase:
• ZFIN:
• PPOD: Mike, Kara
• Berkeley:

Jan/Feb curation targets

The January curation targets will be available by the end of the week. Because of the delay, and because we have an annotation jamboree in February, there wont be any targets next months (other than the two jamboree targets, SLIT2 and NIPBL).

Incorporating new protein family annotations via GAF files

Survey_Handling_PAINT-generated_GAF results are available.

Next electronic annotation jamboree: Monday the 22nd of February.

• The curation call will, as usual, take place at 11am EST, 10 AM CST, 8am PST, 4pm GMT and last a maximum of 2 hours
• Curation targets are SLIT2 and NIPBL

Reference Genome Annotation Camp

There will be a Reference Genome Annotation Camp in Geneva from June 14-18. Emily, Serenella and I are working on the agenda.

Lung development curation targets

• Judy says they now have enough targets; we should starting doing the inferences soon.
• wiki Curation tracking: Reference_Genome_Annotation_Project#Lung_Development_related_Gene_Annotation_Progress
• To do:
  • First pass curation (all MODs)

[ACTION ITEM]: Li : check curation status of December genes to make a plan as to when we can do all those steps.

• • Inferences (Kara, Mike, Pascale, Paul)
  • Verification: MGI curators, outside experts + MODs

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