2015 LEGO Jamboree Logistics: Difference between revisions
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*Regulation of cell proliferation, ubiquitin ligase activity, protein stabilization and localization | *Regulation of cell proliferation, ubiquitin ligase activity, protein stabilization and localization | ||
**Swiss-Prot: [http://www.ncbi.nlm.nih.gov/pubmed/16173922 A novel ARF-binding protein (LZAP) alters ARF regulation of HDM2.] | **Swiss-Prot: [http://www.ncbi.nlm.nih.gov/pubmed/16173922 A novel ARF-binding protein (LZAP) alters ARF regulation of HDM2.] | ||
*miRNA-mediated regulation of transcription factor activity and transcription of enzyme responsible for H2S production and subsequent cell differentation | |||
**UCL: [http://www.ncbi.nlm.nih.gov/pubmed/21659522 Specificity protein-1 as a critical regulator of human cystathionine gamma-lyase in smooth muscle cells.] | |||
**UCL: [http://www.ncbi.nlm.nih.gov/pubmed/22034194 MicroRNA-21 represses human cystathionine gamma-lyase expression by targeting at specificity protein-1 in smooth muscle cells.] | |||
====Discussion and Action Items==== | ====Discussion and Action Items==== | ||
Revision as of 10:44, 1 December 2015
Dates
- December 8-10, 2015
- Start 9am December 8
- End at noon December 10, optionally continue through 4pm or so.
Venue
Geneva, Switzerland
Campus Biotech
Participants
Please use this link to register: https://goo.gl/1t1ybJ
Hotels
Agenda
Tuesday, December 8th
Schedule
- 10am Seminar: Using LEGO to Represent Biological Knowledge - Paul T. and Chris
- For a more general audience
- 11am Workshop Begins: More specific introduction to LEGO for curators
- Lunch
- 1:30pm? Hands-on with Noctua
- Creating simple annatons in Noctua
- A simple enzyme paper Pfkl-- http://www.ncbi.nlm.nih.gov/pubmed/?term=6244280
- A regulation paper Pfkl-- http://www.ncbi.nlm.nih.gov/pubmed/6446714
- Creating simple annatons in Noctua
Discussion and Action Items
Wednesday, December 9th
Schedule
- Continuing on with annotation examples and suggested papers from participants:
- Annotating causal relationships and downstream effects
- TAIR annotation consistency exercise: The MYB36 transcription factor orchestrates Casparian strip formation.
- Annotations involving specific isoforms and feedforward circuits
- Localized cell polarization and GTPase cycle
- Regulation of cell proliferation, ubiquitin ligase activity, protein stabilization and localization
- miRNA-mediated regulation of transcription factor activity and transcription of enzyme responsible for H2S production and subsequent cell differentation
Discussion and Action Items
Thursday, December 10th
Schedule
- Future plans and thoughts
- Seeding models
- Plans for going forward
Discussion and Action Items
Remote Attendees
Doug Howe - ZFIN - sorry I can't be there in person! If you are able to webcast any portions, I'd be happy to drink lots of coffee on my end. Sabrina Toro - ZFIN