2015 Washington DC GOC Symposium Agenda: Difference between revisions
Jump to navigation
Jump to search
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
Date: September 1, 2015 | Date: September 1, 2015 | ||
== Registration & Arrival== | |||
* The GOC Symposium & Workshops Day will be held at the [http://virtualtour.gwu.edu/#UMAP_2013090592962%7CBLD_2013101747929%7B%22mediaArea%22:%22Photos%22%7D Marvin Conference Center, George Washington University], at the heart of Washington, DC. | |||
* '''There is no fee for registration for the Symposium + Workshops Day. All are welcome!''' | |||
* Please [https://www.regonline.com/gene-ontology2015 Register Here] so we can plan breaks and lunch offerings. | |||
===Arriving to The Marvin Center at George Washington University=== | |||
[[File:GOC2015-MarvinCenter.png|200x200 px|frame|alt=Marvin Center|The Marvin Center at GWU]] | |||
* The Marvin Center at George Washington University is located at [https://www.google.com/maps/place/The+Marvin+Center/@38.8999447,-77.0471618,18z/data=!3m1!4b1!4m2!3m1!1s0x89b7b7b0f084314b:0x90983f7d137cf222 21st Street Northwest, Washington, DC]. The conference center is located a 6 minute walk from OWCHotel and a 5 minute walk from Foggy Bottom Metro. | |||
:* [[Media:GOC2015 Walking OWCHotel to Marvin Center at GWU.pdf | Walking directions from OWCHotel to Marvin Center]]. | |||
==Schedule== | |||
====Morning Session==== | ====Morning Session==== | ||
| Line 15: | Line 21: | ||
::- Noctua - Chris | ::- Noctua - Chris | ||
::- Annotating contextual information - (Annotation extensions - Rachael) | ::- Annotating contextual information - (Annotation extensions - Rachael) | ||
* 11:00 - 11:20 '''Coffee break''' | * 11:00 - 11:20 '''Coffee break''' | ||
| Line 23: | Line 28: | ||
"With the recent proliferation of genomic data sets, opportunities for computational scientists to make fundamental contributions to medical research have grown phenomenally. Dr Slonim's group is focused on developing novel computational methods to advance medical research in two primary areas: determining key regulatory processes governing normal human fetal development, and predicting or interpreting interactions between sets of proteins in a context-dependent fashion" | "With the recent proliferation of genomic data sets, opportunities for computational scientists to make fundamental contributions to medical research have grown phenomenally. Dr Slonim's group is focused on developing novel computational methods to advance medical research in two primary areas: determining key regulatory processes governing normal human fetal development, and predicting or interpreting interactions between sets of proteins in a context-dependent fashion" | ||
====Lunch Break==== | ====Lunch Break==== | ||
Revision as of 20:17, 24 August 2015
Date: September 1, 2015
Registration & Arrival
- The GOC Symposium & Workshops Day will be held at the Marvin Conference Center, George Washington University, at the heart of Washington, DC.
- There is no fee for registration for the Symposium + Workshops Day. All are welcome!
- Please Register Here so we can plan breaks and lunch offerings.
Arriving to The Marvin Center at George Washington University
- The Marvin Center at George Washington University is located at 21st Street Northwest, Washington, DC. The conference center is located a 6 minute walk from OWCHotel and a 5 minute walk from Foggy Bottom Metro.
Schedule
Morning Session
- 9:00 - 9:30 Welcoming remarks & overview of today's agenda.
- 9:30 - 11:00 Workshop #1: Annotation (Rama, Pascale, David OS, Chris, Rachael, Ruth)
- - Annotating new genomes and new biology - (microRNA, Rachael)
- - Focus annotation (Cardiovascular and Telomeres - Ruth, synapse - David OS)
- - Noctua - Chris
- - Annotating contextual information - (Annotation extensions - Rachael)
- 11:00 - 11:20 Coffee break
- 11:20 - 11:50 Talk # 1: Donna Slonim, Tufts University
Functional Context Matters: Building and Applying a New Dictionary for Human Development
"With the recent proliferation of genomic data sets, opportunities for computational scientists to make fundamental contributions to medical research have grown phenomenally. Dr Slonim's group is focused on developing novel computational methods to advance medical research in two primary areas: determining key regulatory processes governing normal human fetal development, and predicting or interpreting interactions between sets of proteins in a context-dependent fashion"
Lunch Break
- 11:50 am - 12:40 pm
Afternoon Session
- 12:40 - 1:10 Talk # 2: Trey Ideker, Stanford University
Dr. Ideker is Professor of Medicine at UCSD. He is the Director of the San Diego Center for Systems Biology and the Director of the National Resource for Network Biology. He is a pioneer in using genome-scale measurements to construct network models of cellular processes and disease.
- 1:10 - 2:40 Workshop #2: Enrichment Analysis using the GO.
- - Statistical options and parameters ( Judy )
- 1. Underlying strategy and parameters
- 2. Use VLAD and GeneWeaver tools to demonstrate broad enrichment analysis options and capabilities
- - Defining data sets for GO enrichment analysis (Paul)
- 1. Development of Panther and GO data sets for enrichment analysis
- 2. Current implementation through AmiGO
- 3. Most common go-help issues and solutions
- 4. Next steps and future plans
- - GO tools, website, training, outreach, Helpdesk, and TermGenie (Heiko, Moni, Seth)
- 2:40 - 3:00 Coffee Break
- 3:00 - 3:40 Open discussion: Q&A and concluding remarks.