2016 Hinxton LEGO/Noctua Training Agenda: Difference between revisions
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Everyone who has not registered for Noctua access previously, should register here: http://bit.ly/new-noctua-user | Everyone who has not registered for Noctua access previously, should register here: http://bit.ly/new-noctua-user | ||
Sign up on the [http://wiki.geneontology.org/index.php/2016_Hinxton_LEGO/Noctua_Training_Logistics meeting logistics page] | |||
=Agenda= | =Agenda= | ||
= | [https://docs.google.com/document/d/1UqVG2qSEx__szkbvmGYkdp7A_l8o9jSAFQdkigUyFic/edit?usp=sharing Google doc for adding questions] | ||
*Please add any questions you have to the Google doc so we can review and provide answers/input where needed. This will also help us with the training documentation. | |||
==Day 1 (Wednesday, 2016-08-31)== | |||
=== Morning=== | |||
*9:00 - Introductions | |||
*9:15 - Motivation for LEGO Modeling (Mungall/Thomas) | |||
*9:45 - The Noctua Landing Page (Van Auken) | |||
*10:00 – Making Conventional Annotations using Noctua (Hill) - http://noctua.berkeleybop.org/editor/graph/gomodel:57c4867e00000029 | |||
*10:30 – Coffee break | |||
*11:00 - Introduction to the Annoton, Converting Conventional Annotations to Annotons (Hill) | |||
*11:30 - Adding Contextual Information to Annotons (Hill) | |||
*12:00 - Introduction to Relations Used in LEGO Annotation (Thomas) | |||
*12:30 - Lunch | |||
=== Afternoon=== | === Afternoon=== | ||
*13:30 - Handling Regulation (Hill) | |||
*14:00 - Linking Annotons and Individuals Together, Combining Data from Multiple Papers, Using the Function Companion (Van Auken) | |||
*14:30- Practice Annotating Papers | |||
*15:00 – Coffee break | |||
*15:30 – Practice Annotating Papers | |||
*17:00- End Day 1 | |||
Note: there will be a breakout group for 2:30pm onwards: Chris, David OS, Seth, ... | |||
==Day 2 (Thursday)== | ==Day 2 (Thursday, 2016-09-01)== | ||
=== Morning=== | === Morning=== | ||
*9:00 – Noctua Inputs and Outputs (GPI, NEO, GPAD, GAF, and OWL; RNAs, macromolecular omplexes, ...) (Mungall) | |||
*10:00- Loading Noctua Annotations into MODS- the MGI example (Hill) | |||
*10:30 – Coffee break | |||
*11:00 – Practice Modeling | |||
*12:30 - Lunch | |||
=== Afternoon=== | === Afternoon=== | ||
*13:30- Models Discussion | |||
*15:00 – Coffee break | |||
*15:30- Models Discussion | |||
*17:00- End Day 2 | |||
==Day 3 (Friday, 2016-09-02)== | |||
==Day 3 (Friday) | |||
=== Morning === | |||
*9:00am - 12:30pm Additional Modeling Practice and Discussion, as needed. | |||
[[Category: GO Consortium Meetings]] | [[Category: GO Consortium Meetings]] |
Latest revision as of 09:53, 31 August 2016
Preparation
Everyone who has not registered for Noctua access previously, should register here: http://bit.ly/new-noctua-user
Sign up on the meeting logistics page
Agenda
Google doc for adding questions
- Please add any questions you have to the Google doc so we can review and provide answers/input where needed. This will also help us with the training documentation.
Day 1 (Wednesday, 2016-08-31)
Morning
- 9:00 - Introductions
- 9:15 - Motivation for LEGO Modeling (Mungall/Thomas)
- 9:45 - The Noctua Landing Page (Van Auken)
- 10:00 – Making Conventional Annotations using Noctua (Hill) - http://noctua.berkeleybop.org/editor/graph/gomodel:57c4867e00000029
- 10:30 – Coffee break
- 11:00 - Introduction to the Annoton, Converting Conventional Annotations to Annotons (Hill)
- 11:30 - Adding Contextual Information to Annotons (Hill)
- 12:00 - Introduction to Relations Used in LEGO Annotation (Thomas)
- 12:30 - Lunch
Afternoon
- 13:30 - Handling Regulation (Hill)
- 14:00 - Linking Annotons and Individuals Together, Combining Data from Multiple Papers, Using the Function Companion (Van Auken)
- 14:30- Practice Annotating Papers
- 15:00 – Coffee break
- 15:30 – Practice Annotating Papers
- 17:00- End Day 1
Note: there will be a breakout group for 2:30pm onwards: Chris, David OS, Seth, ...
Day 2 (Thursday, 2016-09-01)
Morning
- 9:00 – Noctua Inputs and Outputs (GPI, NEO, GPAD, GAF, and OWL; RNAs, macromolecular omplexes, ...) (Mungall)
- 10:00- Loading Noctua Annotations into MODS- the MGI example (Hill)
- 10:30 – Coffee break
- 11:00 – Practice Modeling
- 12:30 - Lunch
Afternoon
- 13:30- Models Discussion
- 15:00 – Coffee break
- 15:30- Models Discussion
- 17:00- End Day 2
Day 3 (Friday, 2016-09-02)
Morning
- 9:00am - 12:30pm Additional Modeling Practice and Discussion, as needed.