2018 Montreal GOC Meeting Agenda

AGENDA

Suggestions for topics Fall 2018

Carried over from May 2018

• 'Response to' workshop (similar to the signaling WS)
• Documentation of rules: Which annotation validation rules are currently implemented? https://github.com/geneontology/go-annotation/issues/1928
• Use cases: Should we add this to the agenda? What would be a productive way of discussing this topic? https://docs.google.com/document/d/104m4jUNjPH9pCpskg8E29Zm2pLHhPFmKyIFLa9l_EOQ/edit

New topics

• Which organisms other than cerevisiae and pombe have looked at all protein coding genes for the availability/possibility of GO annotation? If anyone is interested, there is a very quick/easy way to establish the difference between:

1. "not in the GO database (not found) 2. "unknown" (ND), and 3. "unannotated" (no ND, and no annotation in Aspect of interest) for your organisms proteins using the complete known protein ID set for your organism and the GO term mapper tool https://go.princeton.edu/cgi-bin/GOTermMapper (GOTermMapper provides these numbers as part of the output so that the slim set results can be interpreted correctly). (Val)