7 Dec 2021 PAINT Conference Call: Difference between revisions
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==Present== | ==Present== | ||
Marc, Dustin, Pascale, Anushya, Huaiyu | |||
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=== How annotations with conflicting qualifiers are displayed in PAINT Matrix=== | === How annotations with conflicting qualifiers are displayed in PAINT Matrix=== | ||
There are a few cases where there | There are a few cases where there are conflicting annotations. Example PTHR43003(PTN000780612) with experimental NOT annotation for general term GO:0006284 and positive annotation for more specific term GO:0006285. In this case, annotation is displayed with pink dot so that curators can easily take note of conflicting qualifiers. | ||
*Should display be changed when curator adds annotation? | *Should display be changed when curator adds annotation? | ||
Latest revision as of 13:35, 7 February 2022
Present
Marc, Dustin, Pascale, Anushya, Huaiyu
Agenda
Recuration families with IBA conflict at the leaf nodes
IBAs are propagated to the leaf nodes even if there is experimental annotation with a conflict NOT qualifier to the same gene. Anushya curated a list of nodes with conflict.
- Here is the file with nodes to be curated: https://drive.google.com/file/d/1btEkCOzoTERf-NBgN-7VBKUB86_y1unh/view?usp=sharing
- Here are the ones that have been curated with notes: https://drive.google.com/file/d/1fDfbSOXGsi_pAiXUj633nrTYpS9WiFpG/view?usp=sharing
- Here are some examples where IBAs are allowed to stay.
https://docs.google.com/document/d/1YpUQtmZe5elOs94_Aj2AeVax5AsIEyzKkO6ZNKz-yPg/edit?usp=sharing
How annotations with conflicting qualifiers are displayed in PAINT Matrix
There are a few cases where there are conflicting annotations. Example PTHR43003(PTN000780612) with experimental NOT annotation for general term GO:0006284 and positive annotation for more specific term GO:0006285. In this case, annotation is displayed with pink dot so that curators can easily take note of conflicting qualifiers.
- Should display be changed when curator adds annotation?