Difference between revisions of "7 Dec 2021 PAINT Conference Call"

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(Created page with "==Present== ==Agenda== ===Recuration families with IBA conflict at the leaf nodes=== IBAs are propagated to the leaf nodes even if there is experimental annotation with a...")
 
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https://docs.google.com/document/d/1YpUQtmZe5elOs94_Aj2AeVax5AsIEyzKkO6ZNKz-yPg/edit?usp=sharing  
https://docs.google.com/document/d/1YpUQtmZe5elOs94_Aj2AeVax5AsIEyzKkO6ZNKz-yPg/edit?usp=sharing  


=== How annotations with conflicting qualifiers are displayed in PAINT Matrix===
There are a few cases where there is conflicting annotations.  Example PTHR43003(PTN000780612) with experimental NOT annotation for general term GO:0006284 and positive annotation for more specific term GO:0006285.  In this case, annotation is displayed with pink dot so that curators can easily take note of conflicting qualifiers.
*Should display be changed when curator adds annotation?





Revision as of 18:31, 2 December 2021

Present

Agenda

Recuration families with IBA conflict at the leaf nodes

IBAs are propagated to the leaf nodes even if there is experimental annotation with a conflict NOT qualifier to the same gene. Anushya curated a list of nodes with conflict.

https://docs.google.com/document/d/1YpUQtmZe5elOs94_Aj2AeVax5AsIEyzKkO6ZNKz-yPg/edit?usp=sharing

How annotations with conflicting qualifiers are displayed in PAINT Matrix

There are a few cases where there is conflicting annotations. Example PTHR43003(PTN000780612) with experimental NOT annotation for general term GO:0006284 and positive annotation for more specific term GO:0006285. In this case, annotation is displayed with pink dot so that curators can easily take note of conflicting qualifiers.

  • Should display be changed when curator adds annotation?