Annotation 08Apr10: Difference between revisions

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*Pascale- Annotation propagation
*Pascale- Annotation propagation
*Complex
*Complex
*Binding- QC checks- Emily et al
*Binding- QC checks- Emily et al (current QC checks- http://www.geneontology.org/GO.format.annotation.shtml#script)
*Pascale- send email/doodle poll about response-to
*Pascale- send email/doodle poll about response-to
*Pascale- agenda item about cell proliferation
*Pascale- agenda item about cell proliferation
*Emily will reply to Doug's email on IGI
*Emily will reply to Doug's email on IGI

Revision as of 12:16, 8 April 2010

Current items: - GO wiki layout (change lefthand menu from Annotation Outreach to Annotation Coordination, and move all annotation pages under this page?

- Working groups for GO camp --- could someone from SGD please join the Downstream effects working group? As we discussed the different annotation methods by SGD and S.pombe might make a nice example of the inconsistencies in annotation practice. --- alerts to groups to initiate kick-off calls.

- GO Consortium meeting action items

New items:

- Doug Howe's query on with field for use in IGI annotations

- Reference Genome targets - delay new heart target list to allow GO camp discussions? (Pascale)

- Ben Temperton, Paul Carini (Giovannoni Lab regarding their annotation pipeline of the SAR11 genomes) from Pascale.

- review RCA code documentation

- get annotation working groups up and going.

- make protein binding documentation

- start looking into implementing annotation QC checks.

- Association file Readme updates (Rama)

Action items

  • Rama- High-throughput working group
  • Pascale- Annotation propagation
  • Complex
  • Binding- QC checks- Emily et al (current QC checks- http://www.geneontology.org/GO.format.annotation.shtml#script)
  • Pascale- send email/doodle poll about response-to
  • Pascale- agenda item about cell proliferation
  • Emily will reply to Doug's email on IGI