Annotation Advocacy Roadmap: Difference between revisions
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|Educate GOC curators|Jamborees for Reference Genome | |'''Educate GOC curators|Jamborees for Reference Genome''' | ||
|Ongoing | |Ongoing | ||
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|Outreach to new groups | |'''Outreach to new groups''' | ||
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|Enforce annotation guidelines (absolute checks-annotations are wrong) | |'''Enforce annotation guidelines (absolute checks-annotations are wrong)''' | ||
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|phase 1 QC checks for protein binding annotations | |phase 1 QC checks for protein binding annotations | ||
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!Documentation of annotation guidelines | |||
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|working groups formed <font color ="red">(DONE) | |working groups formed <font color ="red">(DONE) |
Revision as of 07:48, 8 July 2010
Project | March | April | May | June | July | August | September | October | November | December |
---|---|---|---|---|---|---|---|---|---|---|
Jamborees for Reference Genome | Ongoing | |||||||||
Outreach to new groups | document policy/guidelines for new annotating groups/jamborees (start) | document policy/guidelines for new annotating groups/jamborees (finish) | ||||||||
Enforce annotation guidelines (absolute checks-annotations are wrong) | phase 1 QC checks for protein binding annotations | request for QC checks (done) | formulate phase 2 QC checks, come up with pipeline (schedule for running these scripts etc.) | request for phase 2 QC checks | phase 1 QC checks in production | phase 2 QC checks in production | ||||
Soft QC checks (annotations that need to be reviewed but not removed) | gather specs for taxon triggers, matrix checks, other checks from annotation WGs | formulate soft QC checks, come up with pipeline (schedule for running these scripts etc.) | soft QC checks in production | |||||||
Documentation of annotation guidelines | working groups formed (DONE) | complete at GO Camp | guidelines in production | |||||||
Documentation of evidence code guidelines | agreed to adopt a new evidence code system | initiate conversation with ECO group and ? | ratify IMP, RCA, IGI documentation | work on details | retrofit plan | new ECO in production | ||||
GAF file format | guidelines for GAF2.0 (column 16) | continue discussion on col-16 content at GO camp | ||||||||
Loading PAINT GAF files | feedback | discussion at GO camp | incorporate PAINT inferences at MODs | |||||||
Loading other GAF files | initiate talk with Chris about inter-ontology inferences | send email out to MODs to review/give feedback | establish pipeline (resting place, updating schedule etc.) | incorporate inter-ontology inferences | ||||||
Educate curators on ontology development | ongoing | |||||||||
AmiGO/QuickGO displays | ongoing |