Annotation Archived Pages: Difference between revisions
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*[[gp2protein file]] | *[[gp2protein file]] | ||
*[[gp2rna file]] | *[[gp2rna file]] | ||
*[[mechanisms for reducing annotation redundancy]] | *[[mechanisms for reducing annotation redundancy]] | ||
*[[Annotations to Cell Fraction-type terms]] | *[[Annotations to Cell Fraction-type terms]] | ||
Revision as of 12:31, 14 March 2019
GO Annotation Meetings
2010 GO Annotation Camp in Geneva, Switzerland, June 16-18 2010
Guidelines from Annotation Camp
Annotation Meeting Stanford, CA, Feb 2012
Migration of annotating groups to Protein2GO
Procedure for migration of protein annotations to Protein2GO
Extension of Protein2GO to non-UniProtKB Identifiers
Annotation File Formats
Activities
- Roadmap 2010
- Roadmap 2011
- RoadMap (PDF file - provides project goals with time line)
- Educate GOC curators about best annotation practice;
- Enforce annotation rules/policies within GOC
- Maintain the annotation/evidence code documentation
- Train/assist new groups with annotations: see How_External_Communities_can_contribute_annotations_to_the_GO_Consortium
- Educate and keep all the annotating groups up-to-date with changes in GAF format
- Keep all curators up-to-date with ontology development and how it affects annotations
- Chain of Evidence- Proposal to represent chain/summation of evidence in an annotation.
- Evidence Code Ontology (ECO) - Proposal to represent evidence in an ontology
- Proposal for cron tabs - Proposal for setting up cron tabs for generating PAINT and MF-BP inferences
- Examples for phylogeny based evidence codes
- Ideas for GOC community curation tool
- Protein Complex ids as GO annotation objects
- LEGO-style annotation ideas
- Proposed Developments to the GAF annotation format
- InterPro2GO Session October 4th 2011
- MF-BP inferences
- Protein Binding clean up
- Annotation Guidance Pages
- Evidence Code proposals
- With/From field restrictions for evidence codes
- Core Consortium annotation activities
- GPAD
- Common Annotation Framework Specification
- gp2protein file
- gp2rna file
- mechanisms for reducing annotation redundancy
- Annotations to Cell Fraction-type terms
- TermEnrichment: Gold Standard Data Sets
- "Response to" terms
- GAF 2.1 specs
Monthly Reports
- September 2011
- August 2011
- July 2011
- June 2011
- May 2011
- April 2011
- March 2011
- February 2011
- January 2011
- December 2010
- November 2010
- October 2010
- September 2010
- August 2010
- July 2010
- June 2010
Meeting calendar
Annotation_topics for next meeting
Process
Issues for the Annotation Group
- Division of annotation and GO content development effort and feedback between participating databases (UniProtKB and MODs)