Annotation Conf. Call, January 10, 2012: Difference between revisions
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'''* IC to/from ISS annotations''' | '''* IC to/from ISS annotations''' | ||
Some curators would like to supply a non-model organism with a full set of high-quality annotations, by transferring all appropriate knowledge from a well manually-curated gene product. | Some curators would like to supply a non-model organism with a full set of high-quality annotations, by transferring all appropriate knowledge from a well manually-curated gene product. | ||
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Currently only EXP-evidenced annotations can be propagated to other gene products via the ISS evidence code. | Currently only EXP-evidenced annotations can be propagated to other gene products via the ISS evidence code. | ||
What should curators do when they would like to propagate the information from an IC-evidenced annotation to a range of gene products in a related organism? | What should curators do when they would like to propagate the information from an IC-evidenced annotation to a range of gene products in a related organism? | ||
Full details [http://wiki.geneontology.org/index.php/IC_to/from_ISS_annotations IC to/from ISS annotations here] | Full details [http://wiki.geneontology.org/index.php/IC_to/from_ISS_annotations IC to/from ISS annotations here] | ||
'''* Planned changes to the IEA GO_REFs cited | '''* Planned changes to the IEA GO_REFs cited in the UniProt-GOA file''' | ||
- | - New GO_REFs proposed to identify annotations differently created for UniProtKB/Swiss-Prot and UniProtKB/TrEMBL entries from the UniProtKB keywords and UniProtKB subcellular locations vocabulary mappings. | ||
- rename of mapping files | - Proposal to rename of spsl and spkw mapping files to better indicate they are UniProt vocabularies | ||
- | - Intention to transform some incorrect IEAs supplied by the UniProt-GOA files. | ||
Full details [http://wiki.geneontology.org/index.php/Planned_changes_to_the_IEA_GO_REFs_cited_by_UniProtKB. here] | Full details [http://wiki.geneontology.org/index.php/Planned_changes_to_the_IEA_GO_REFs_cited_by_UniProtKB. here] | ||
Revision as of 07:13, 5 January 2012
Agenda
* IC to/from ISS annotations
Some curators would like to supply a non-model organism with a full set of high-quality annotations, by transferring all appropriate knowledge from a well manually-curated gene product.
Currently only EXP-evidenced annotations can be propagated to other gene products via the ISS evidence code.
What should curators do when they would like to propagate the information from an IC-evidenced annotation to a range of gene products in a related organism?
Full details IC to/from ISS annotations here
* Planned changes to the IEA GO_REFs cited in the UniProt-GOA file
- New GO_REFs proposed to identify annotations differently created for UniProtKB/Swiss-Prot and UniProtKB/TrEMBL entries from the UniProtKB keywords and UniProtKB subcellular locations vocabulary mappings.
- Proposal to rename of spsl and spkw mapping files to better indicate they are UniProt vocabularies
- Intention to transform some incorrect IEAs supplied by the UniProt-GOA files.
Full details here