Annotation Conf. Call, January 10, 2012

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Revision as of 07:13, 5 January 2012 by Edimmer (talk | contribs) (→‎Agenda)
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Agenda

* IC to/from ISS annotations


Some curators would like to supply a non-model organism with a full set of high-quality annotations, by transferring all appropriate knowledge from a well manually-curated gene product.

Currently only EXP-evidenced annotations can be propagated to other gene products via the ISS evidence code.

What should curators do when they would like to propagate the information from an IC-evidenced annotation to a range of gene products in a related organism?

Full details IC to/from ISS annotations here

* Planned changes to the IEA GO_REFs cited in the UniProt-GOA file

- New GO_REFs proposed to identify annotations differently created for UniProtKB/Swiss-Prot and UniProtKB/TrEMBL entries from the UniProtKB keywords and UniProtKB subcellular locations vocabulary mappings.

- Proposal to rename of spsl and spkw mapping files to better indicate they are UniProt vocabularies

- Intention to transform some incorrect IEAs supplied by the UniProt-GOA files.

Full details here