Annotation Conf. Call 2017-09-12: Difference between revisions

From GO Wiki
Jump to navigation Jump to search
Line 8: Line 8:
[https://github.com/geneontology/go-annotation/projects/4  github/go-annotation Signaling Projects page]
[https://github.com/geneontology/go-annotation/projects/4  github/go-annotation Signaling Projects page]


* JAK/STAT
* JAK/STAT - Giulia (Ruth away)
**[https://docs.google.com/spreadsheets/d/1H6ZCHAxd5YSpj-UaUzkJ6ssF2FXj9hT8kkT5qGaS1lY/edit#gid=683337807 Google spreadsheet with annotation and ontology analysis]
**Thinking about how to define the beginning of the pathway and its components
**How is the pathway regulated?
**Review annotations - Annotation and Ontology Issues:
***Some members of the pathway have regulation terms and some regulators are annotated directly to the pathway
***Many cases with no MF terms
***Tickets: [https://github.com/geneontology/go-ontology/issues/14164 positive regulation of TF dimerization activity #14164], [https://github.com/geneontology/go-ontology/issues/14165 positive regulation of STAT transcription factor activity #14165], [https://github.com/geneontology/go-ontology/issues/14166 tyrosine dephosphorylation of STAT protein #14166], [https://github.com/geneontology/go-ontology/issues/14167 JAK/STAT pathway #14167]
**Working on GO-CAM model
* GPCR
* GPCR
* MAPK - David, Sabrina
* MAPK - David, Sabrina

Revision as of 08:57, 12 September 2017

Meeting URL

Agenda

Update on Signaling Projects

github/go-annotation Signaling Projects page

Cambridge GO Meeting

Minutes

  • On call: