Annotation Conf. Call 2018-03-27: Difference between revisions

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**[http://wiki.geneontology.org/index.php/Guide_to_GO_Evidence_Codes Guide to GO Evidence Codes]
**[http://wiki.geneontology.org/index.php/Guide_to_GO_Evidence_Codes Guide to GO Evidence Codes]
**[https://github.com/geneontology/go-annotation/issues/1773 Annotation standards for HTP proteomics experiments]
**[https://github.com/geneontology/go-annotation/issues/1773 Annotation standards for HTP proteomics experiments]
**[https://github.com/geneontology/go-annotation/issues/1801 Review RCA evidence code] - Please can the groups listed below review their RCA annotations and decide if they'd still like to keep them and if RCA is still the appropriate evidence code?
***TAIR
***MGI
***SGD
***RGD


== Annotation Review ==
== Annotation Review ==

Revision as of 17:32, 12 March 2018

Agenda

GOC Meeting, NYU, New York, NY, May 12-14th

  • Reminder to register, and reserve your hotel room before April 6th if staying at the Shelburne NYC
  • Logistics
  • Agenda

20th Anniversary GO Meeting, Montreal, CA

  • Dates set for Oct 17-20

HTP Annotation Guidelines

Annotation Review

  • Annotation review is being driven by annotation QC and ontology development
  • Goal here is for correct and consistent annotation
    • Prioritize by:
      • Annotations that are incorrect
      • Annotations to terms that are being made obsolete
      • Annotations to high level terms that are not informative
      • Annotations to grouping terms for which more granular, informative terms exist (maybe weren't found initially or were created after the annotation was made)
  • Tickets are created in the geneontology/go-annotation repo on github
  • Currently, 55 open tickets labeled with Annotation Review in geneontology/go-annotation
  • Tickets are assigned to representatives of the annotation groups that need to perform the review
  • Once review is done, please remove yourself from the assignee list AND record the action in the accompanying Google spreadsheet linked from the github ticket
  • Spreadsheet on GO Annotation Google drive with specific annotations, suggestions
    • Need a re-review of palate development annotations.
  • Tickets for discussion:
  • Some older tickets that still need to be addressed:

Annotation Requests

Minutes

  • On call:
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