Annotation Conf. Call 2022-08-16

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Agenda and Minutes

Meetings and Announcements

Fall 2022 Consortium Meeting

  • In person with remote accommodation
  • At Caltech, Pasadena, CA, Tuesday, October 11th - Thursday, October 13th
  • Will send out registration form soon
  • Please think about agenda items and breakout group topics

Noctua

  • Next regularly scheduled Noctua outage:
    • Thursday, September 8th

GO Release Pipeline

  • August release still pending?

AmiGO

Ontology

Histone modifications

Added many MFs for histone modifications -

  • histone acetyltransferase activity
    • 'histone H2A acetyltransferase activity'
      • 'histone H2AK5 acetyltransferase activity'
      • 'histone H2AK9 acetyltransferase activity'
    • 'histone H2B acetyltransferase activity'
      • 'histone H2BK12 acetyltransferase activity'
      • 'histone H2BK5 acetyltransferase activity'
    • 'histone H3 acetyltransferase activity'
      • 'histone H3K14 acetyltransferase activity'
      • 'histone H3K18 acetyltransferase activity'
      • 'histone H3K23 acetyltransferase activity'
      • 'histone H3K27 acetyltransferase activity'
      • 'histone H3K36 acetyltransferase activity'
      • 'histone H3K4 acetyltransferase activity'
      • 'histone H3K56 acetyltransferase activity'
      • 'histone H3K72 acetyltransferase activity'
      • 'histone H3K9 acetyltransferase activity'
    • 'histone H4 acetyltransferase activity'
  • histone methyltransferase activity
    • 'histone arginine N-methyltransferase activity'
      • 'histone H2AR3 methyltransferase activity'
      • 'histone H3R17 methyltransferase activity'
      • 'histone H3R2 methyltransferase activity'
      • 'histone H3R8 methyltransferase activity'
      • 'histone H4R3 methyltransferase activity'
    • 'histone glutamine N-methyltransferase activity'
    • 'histone lysine N-methyltransferase activity'
      • 'histone H3K27 methyltransferase activity'
      • 'histone H3K36 methyltransferase activity'
      • 'histone H3K37 methyltransferase activity'
      • 'histone H3K4 methyltransferase activity'
      • 'histone H3K56 methyltransferase activity'
      • 'histone H3K79 methyltransferase activity'
      • 'histone H3K9 methyltransferase activity'
      • 'histone H4K20 methyltransferase activity'

Annotation

Review of histone modification annotations

Annotation error reports and annotation review

  • Please remember to keep checking the reports generated by the pipeline and address any errors
  • Also check annotation review tickets assigned to you/your group in go-annotation repo on github
  • Questions about either - please bring to the meeting

GO-CAM and Noctua

Other Projects

Attendees

  • On call: