Annotation Conf. Call May 28, 2013: Difference between revisions
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* URL for PANTHER IDs- http://pantree.org/node/annotationNode.jsp?id=PTN000177279 | * URL for PANTHER IDs- http://pantree.org/node/annotationNode.jsp?id=PTN000177279 | ||
** If you are loading/displaying PAINT annotations, please have the PANTHER IDs in the With column point to this URL. This leads one to the evidence trail. | ** If you are loading/displaying PAINT annotations, please have the PANTHER IDs in the With column point to this URL. This leads one to the evidence trail. | ||
*Discussion of Database Identifiers Used in the With/From Column | |||
**Identifiers are required in the With/From field for some evidence codes, such as IPI and IGI. | |||
**For other evidence codes, such as IMP, entries in the With/From field are optional. | |||
**For developing the Common Annotation Framework, we would like to review what identifiers are used in the With/From field and, if applicable, what their use would be. | |||
Revision as of 16:23, 21 May 2013
Agenda
- New GO_REF for apoptosis IC
- Auto repair of annotations to obsolete and merged terms- Plan is to have Mike's filtering script transfer annotations when there is a one-to-one replacement of obsolete and merged terms. Any questions?
- URL for PANTHER IDs- http://pantree.org/node/annotationNode.jsp?id=PTN000177279
- If you are loading/displaying PAINT annotations, please have the PANTHER IDs in the With column point to this URL. This leads one to the evidence trail.
- Discussion of Database Identifiers Used in the With/From Column
- Identifiers are required in the With/From field for some evidence codes, such as IPI and IGI.
- For other evidence codes, such as IMP, entries in the With/From field are optional.
- For developing the Common Annotation Framework, we would like to review what identifiers are used in the With/From field and, if applicable, what their use would be.