Annotation Extension: Difference between revisions

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* http://wiki.geneontology.org/index.php/Annotation_Extension ''(this page)''
* http://wiki.geneontology.org/index.php/Annotation_Extension ''(this page)''
* http://wiki.geneontology.org/index.php/Annotation_Relations
* http://wiki.geneontology.org/index.php/Annotation_Relations
* http://wiki.geneontology.org/index.php/Annotation_Extension:_Capturing_cell_and_tissue_types
* http://wiki.geneontology.org/index.php/Guidance_for_updating_deprecated_Annotation_Extension_Relations
* http://wiki.geneontology.org/index.php/Guidance_for_updating_deprecated_Annotation_Extension_Relations
* https://github.com/geneontology/annotation_extensions (NOTE that P2GO links to this doc - ''2021-09-29 is this still the case??'') ''archived''
* https://github.com/geneontology/annotation_extensions (NOTE that P2GO links to this doc - ''2021-09-29 is this still the case??'') ''archived''

Revision as of 10:25, 6 October 2021

Purpose of annotation extensions

Annotation Extensions allows GO terms in standard annotations to be further specified, using gene products, chemicals, cell types, anatomical structures. The ontology terms used to extend annotations are GO term or external ontologies. Annotation extensions allows to build a more complete model of biological systems.

Relations valid for annotation extensions

Relations used for GO annotation extensions are from the Relation Ontology


Dependent and independent statement in annotation extensions

TO BE COMPLETED: Protein2GO allows to make dependent and independent statements that are exported in GAF as pipes and comma, respectively.

Other pages to review

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