Happens during: Difference between revisions

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'''2. A process occurring during a cell cycle phase''
Statement from paper:
We here show that the mitotic master phosphatase Cdc14 targets Yen1 to the nucleus in early anaphase through the FEAR network. In Figure 2, Yen1 re-localizes back to the nucleus in early anaphase in a Cdc14-dependent manner.
{| class="wikitable" border="1"
|-
! Gene Name (col 2)
! GO ID (col 5)
! Reference (col 6)
! Evidence (col 7)
! Annotation Extension (col 16)
|-
| Q00684  <span style="color:green">cdc14</span>
| GO:0034504 <span style="color:green">protein localization to nucleus</span>
| PMID:24626187
|
| happens_during(GO:0000090 <span style="color:green">mitotic anaphase</span>)





Revision as of 11:27, 12 June 2014

Definition

Identifies a process during which a molecular function or biological process occurs

Comment

To link a physical entity to a process by duration, use exists_during.

Synonym

occurs_during (EXACT)

Child terms

  • None.

Scope of use

Domain

BFO:0000007 ! process (Biological Process or Molecular Function)

Range

BFO:0000007 ! process (Biological Process or Molecular Function)

Annotation Extension Usage Examples

1. A process occurring during cell development

Statement from paper:

In most cell systems that have been examined, the primary signal transduction pathway for BMPs involves phosphorylation of Smad-1 [22]... To determine if BMP-5 initiates similar signaling events in sympathetic neurons, cultured sympathetic neurons grown in the absence of glial cells were treated with BMP-5 for 30 or 60 min then analyzed by Western blotting using Abs specific for total Smad-1 or for phosphorylated Smad-1. Phosphorylation of Smad-1 is evident within 30 min after exposure to BMP-5 (Figure 4A) with significantly increased pSmad-1 levels apparent at 60min. In contrast, treatment with BMP-5 did not alter levels of total Smad-1 (Figure 4B).


Gene Name (col 2) GO ID (col 5) Reference (col 6) Evidence (col 7) Annotation Extension (col 16)
P22003 BMP5 GO:0010862 positive regulation of pathway-restricted SMAD protein phosphorylation PMID:11580864 IDA happens_during(GO:0016358 dendrite development)


'2. A process occurring during a cell cycle phase

Statement from paper:

We here show that the mitotic master phosphatase Cdc14 targets Yen1 to the nucleus in early anaphase through the FEAR network. In Figure 2, Yen1 re-localizes back to the nucleus in early anaphase in a Cdc14-dependent manner.

Gene Name (col 2) GO ID (col 5) Reference (col 6) Evidence (col 7) Annotation Extension (col 16)
Q00684 cdc14 GO:0034504 protein localization to nucleus PMID:24626187 happens_during(GO:0000090 mitotic anaphase)




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