Annotation Extension Relation:has regulation target: Difference between revisions

From GO Wiki
Jump to navigation Jump to search
mNo edit summary
Line 1: Line 1:
Back to [http://wiki.geneontology.org/index.php/Annotation_usage_examples_for_each_annotation_extension_relation  Annotation usage examples for each annotation extension relation]
==Definition==
==Definition==



Revision as of 09:33, 18 February 2015

Back to Annotation usage examples for each annotation extension relation

Definition

Identifies a gene or gene product affected by a regulation Biological Process or regulator Molecular Function.

Child terms

  • None

Scope of use

Domain

GO:0065007 ! biological regulation

Range

ENTITY_UNION:0000005 ! chemical, gene product or complex

Annotation Extension Usage Examples

Loss of transcription factor activity affects gene expression:

Statements from paper:

Indeed, LGG-1 was massively upregulated in atf-2(tm467) mutant embryos, as compared with the wild type (Fig. 6A). We observed a similar extent of BEC-1 upregulation in the atf-2-deficient background (data not shown).


Gene Name (col 2) GO ID (col 5) Reference (col 6) Evidence (col 7) Annotation Extension (col 16)
WBGene00000220 atf-2(tm467) GO:0000122 negative regulation of transcription from RNA polymerase II promoter PMID:21502138 IMP

has_regulation_target(WB:WBGene00000247 bec-1)|has_regulation_target(WB:WBGene00002980 lgg-1

Back to Annotation Extension: Capturing participants



Back to Annotation usage examples for each annotation extension relation