Annotation Extension Relation Subsets
Redirect to:
These lists are intended for inclusion into curation tools to make it easier to choose a relation for a particular entity type.
Questions:
Should we have a separate subset for advanced relations, which includes relations such as regulates_o_results_in_movement_of, has_output_o_product_of, gene_product_of?
Cell/tissue/anatomy type
part_of
occurs_in
not_occurs_in
has_agent
acts_on_population_of
results_in_development_of
results_in_morphogenesis_of
results_in_maturation_of
results_in_commitment_to
results_in_movement_of
results_in_determination_of
results_in_specification_of
results_in_division_of
results_in_acquisition_of_features_of
results_in_formation_of
Developmental stages
part_of
during
happens_during
exists_during
not_during
not_happens_during
not_exists_during
Chemical
dependent_on
not_dependent_on
has_input
has_direct_input
has_indirect_input
has_output
in_absence_of
in_presence_of
inhibited_by
activated_by
localization_dependent_on
requires_substance
Protein, protein complex, gene or transcript identifier
dependent_on
not_dependent_on
has_input
has_direct_input
has_indirect_input
has_output
has_regulation_target
in_absence_of
in_presence_of
localization_dependent_on
requires_direct_regulator
requires_regulation_by
requires_regulator
stabilizes
Sequence feature
dependent_on
not_dependent_on
localization_dependent_on
requires_sequence_feature
requires_target_sequence_feature
occurs_at
not_occurs_at
GO:cellular component
part_of
requires_localization
localization_dependent_on
has_agent
occurs_at
not_occurs_at
occurs_in
not_occurs_in
results_in_development_of
results_in_maturation_of
results_in_morphogenesis_of
GO:molecular function
localization_dependent_on
dependent_on
not_dependent_on
during
happens_during
exists_during
not_during
not_happens_during
not_exists_during
GO:biological process
part_of
localization_dependent_on
dependent_on
not_dependent_on
during
happens_during
exists_during
not_during
not_happens_during
not_exists_during