Revision as of 06:30, 5 April 2019

Annotation quality control checks ensure that GO annotations are of high quality. The annotation validation process includes both format checks on the raw data and tests of the quality of the data within the file.

GO Central (GOC) QC Procedure

GO Central rules are documented here: https://github.com/geneontology/go-site/blob/master/metadata/rules/README.md

GO rules

(Documentation in progress): https://github.com/geneontology/go-site/tree/master/metadata/rules
The QC checks consist of either "filters" or "reports". Filters exclude annotations from the files that the GO consortium generates; reports allow the annotations to be exported, but contributing groups get notified to correct annotations.

GO rules reports
- Snapshot (the report groups should monitor daily or weekly): http://snapshot.geneontology.org/reports/gorule-report.html
- Latest Official Monthly Release (the errors present in our most up to date release): http://current.geneontology.org/reports/gorule-report.html

Annotation Review Request

How the GOC uses GitHub to request review of annotations

Proposal for Author Feedback for annotations

To be implemented

QC procedures from contributing groups

@@ Line 9: / Line 9: @@
 * (Documentation in progress): https://github.com/geneontology/go-site/tree/master/metadata/rules
 * The QC checks consist of either "filters" or "reports". Filters exclude annotations from the files that the GO consortium generates; reports allow the annotations to be exported, but contributing groups get notified to correct annotations.
 * '''GO rules reports'''
@@ Line 20: / Line 19: @@
 === [[Proposal for Author Feedback for annotations]] ===
 * To be implemented
 =[[QC procedures from contributing groups]]=

Annotation Quality Control: Difference between revisions