Causally upstream of, negative effect: Difference between revisions
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*The 'causally upstream of, negative effect' relation is used to relate GO Biological Processes (BP) and/or GO Molecular Functions (MF) when: | *The 'causally upstream of, negative effect' relation is used to relate GO Biological Processes (BP) and/or GO Molecular Functions (MF) when: | ||
**the mechanism that relates the upstream process (BP or MF) to the downstream process (BP or MF) is understood | **the mechanism that relates the upstream process (BP or MF) to the downstream process (BP or MF) is understood | ||
**the activities of the gene products in the upstream process occur before | **the activities of the gene products in the upstream process occur before some event in the downstream process | ||
**the execution of the upstream event decreases the execution of the downstream event | **the execution of the upstream event decreases the execution of the downstream event | ||
== Annotation Usage Guidelines == | == Annotation Usage Guidelines == |
Revision as of 17:14, 8 November 2022
Overview and Scope of Use
- The 'causally upstream of, negative effect' relation is used to relate GO Biological Processes (BP) and/or GO Molecular Functions (MF) when:
- the mechanism that relates the upstream process (BP or MF) to the downstream process (BP or MF) is understood
- the activities of the gene products in the upstream process occur before some event in the downstream process
- the execution of the upstream event decreases the execution of the downstream event
Annotation Usage Guidelines
- Standard Annotation (This relation should not be used for standard annotations.)
- Guidelines
- What to capture
- What not to capture
- Guidelines
- Examples
- GO-CAM Annotation
- Guidelines
- What to capture
- What not to capture
- Guidelines
- Examples
Ontology Usage Guidelines
Quality Control Checks
- Annotations can be validated using a Shape Expressions (ShEx) representation of allowed relations between ontology terms.(STILL NEEDS TO BE ENTERED)
Child Terms
Relations Ontology
causally upstream of, negative effect
Review Status
Last reviewed: October 31, 2022 David