Causally upstream of, negative effect: Difference between revisions
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== Overview and Scope of Use == | == Overview and Scope of Use == | ||
*The 'causally upstream of, negative effect' relation is used to relate GO Biological Processes (BP) and/or GO Molecular Functions (MF) when: | *The 'causally upstream of, negative effect' relation is used to relate GO Biological Processes (BP) and/or GO Molecular Functions (MF) when: | ||
**the mechanism that relates the upstream process (BP or MF) to the downstream process (BP or MF) is understood | **the mechanism that relates the upstream process (BP or MF) to the downstream process (BP or MF) is understood enough to know that the upstream process is not part of the downstream process | ||
**the activities of the gene products in the upstream process occur before some event in the downstream process | **the activities of the gene products in the upstream process occur before some event in the downstream process | ||
**the execution of the upstream event impinges on the downstream event by decreasing its execution | **the execution of the upstream event impinges on the downstream event by decreasing its execution |
Revision as of 17:16, 8 November 2022
Overview and Scope of Use
- The 'causally upstream of, negative effect' relation is used to relate GO Biological Processes (BP) and/or GO Molecular Functions (MF) when:
- the mechanism that relates the upstream process (BP or MF) to the downstream process (BP or MF) is understood enough to know that the upstream process is not part of the downstream process
- the activities of the gene products in the upstream process occur before some event in the downstream process
- the execution of the upstream event impinges on the downstream event by decreasing its execution
Annotation Usage Guidelines
- Standard Annotation (This relation should not be used for standard annotations.)
- Guidelines
- What to capture
- What not to capture
- Guidelines
- Examples
- GO-CAM Annotation
- Guidelines
- What to capture
- What not to capture
- Guidelines
- Examples
Ontology Usage Guidelines
Quality Control Checks
- Annotations can be validated using a Shape Expressions (ShEx) representation of allowed relations between ontology terms.(STILL NEEDS TO BE ENTERED)
Child Terms
Relations Ontology
causally upstream of, negative effect
Review Status
Last reviewed: October 31, 2022 David