Data Capture Call 2016-08-10: Difference between revisions

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[[Category:Advocacy and Outreach]] [[Category:Working Groups]]
[[Category:Advocacy and Outreach]]  
Back to [[Data Capture Working Group|Data Capture Working Group]]
Back to [[Data Capture Working Group|Data Capture Working Group]]


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*****Discuss maintenance of datasets in the long term: what happens when annotations become stale and submitting groups have disappeared?
*****Discuss maintenance of datasets in the long term: what happens when annotations become stale and submitting groups have disappeared?
**** The ''Ad hoc'' contributions page has not yet been updated.
**** The ''Ad hoc'' contributions page has not yet been updated.
*** Regarding the '''scale of submissions''', ToDo: At the beginning of the flowchart, add a question about whether groups plan to submit a “one-time” dataset or recurring submissions.
*** Regarding '''training material''', ToDo: let’s gather materials currently available from Claire, Ruth, Melanie, and Moni.
*** Regarding '''training material''', ToDo: let’s gather materials currently available from Claire, Ruth, Melanie, and Moni.
*** '''Flowchart''': Kimberly has worked on simplifying the [https://docs.google.com/presentation/d/1K6U2L-F7rmGEPBAfkeF_GobinTKTE1j6P8bfLM6huPY/edit#slide=id.g115cdca222_2_0 flowchart]. A few questions remain:  
*** '''Flowchart''': Kimberly has worked on simplifying the [https://docs.google.com/presentation/d/1K6U2L-F7rmGEPBAfkeF_GobinTKTE1j6P8bfLM6huPY/edit#slide=id.g115cdca222_2_0 flowchart]. A few questions remain:  
**** Step 1: check what exists, centralized place QuickGO/AmiGO
**** Step 1: check what exists, centralized place QuickGO/AmiGO
**** Step 2: information is complete / nonexistent / incomplete
**** Step 2: information is complete / nonexistent / incomplete
**** Regarding the '''scale of submissions''', ToDo: At the beginning of the flowchart, add a question about whether groups plan to submit a “one-time” dataset or recurring submissions.
See notes for next meeting at [[Data Capture Call 2016-08-24]]

Latest revision as of 10:01, 9 April 2019

Back to Data Capture Working Group


Agenda

  • Has everyone looked over and contributed their comments to the Request a paper for Annotation form? Or is this the finalized form and are we ready to make it available to the public? The form can be found at https://goo.gl/zzUkzg
  • There are a number of pending ToDos from previous calls. Have these been addressed?
    • From 2016-05-10 and 2016-06-08:
      • Update the Ad hoc contributions page with the form Ruth & Seth designed:
        • Seth has already looked into sending the current results (table format) to a GitHub issue, working on a scraper to pick up the data on a Google Spreadsheet. Now we need to make a little time to finalize the formats/what we want to capture.
        • Seth is also working on this Contributor data pool document on Github, as an experimental, freestanding structured resource for external data contributors. Have these discussions already taken place?
          • Discuss how to keep track of the quality of the data we consume: Syntactic check ? Semantic check ? Check the biology manually ?
          • Discuss maintenance of datasets in the long term: what happens when annotations become stale and submitting groups have disappeared?
        • The Ad hoc contributions page has not yet been updated.
      • Regarding training material, ToDo: let’s gather materials currently available from Claire, Ruth, Melanie, and Moni.
      • Flowchart: Kimberly has worked on simplifying the flowchart. A few questions remain:
        • Step 1: check what exists, centralized place QuickGO/AmiGO
        • Step 2: information is complete / nonexistent / incomplete
        • Regarding the scale of submissions, ToDo: At the beginning of the flowchart, add a question about whether groups plan to submit a “one-time” dataset or recurring submissions.


See notes for next meeting at Data Capture Call 2016-08-24