Dec2005 GO Ed report
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GO Editorial Office Report - December 2005
SourceForge items Items opened 41 Closed by editorial office 71 (note: 1 SF item closed outside GO-Ed. this month; see end of report for details and for non-GO-Ed contributors to items we closed) Items in progress, assigned to editorial office 74 See monthly report in CVS for ontology statistics. Content topics in progress: Cell cycle (Amelia, with Val Wood, PSU) Metamorphosis (Jen, with others including MA, Russ Collins, FB) Pollination (Amelia, with several plant people including TAIR curators) Two function terms for TAIR (Amelia, with Suparna Mundodi, TAIR) Topics from content meeting; see below Complete is_a paths for cellular component (Jane, with Chris M) Content topics resolved: Behavior (Amelia, with Erich Schwarz, WB) Blood pressure regulation (Amelia, with Jane, and motivated and guided by David Hill, MGI) Branching morphogenesis (Jen) Cellular component additions for TAIR/MetaCyc; includes univocal membrane/envelope distinction (Midori, with others including Peifen Zhang at TAIR and Michelle Gwinn at TIGR) Locomotion/behavior relationships (Midori, with several others) Neurogenesis (Jen) Several function terms for TAIR (Amelia, with Suparna Mundodi, TAIR) Several small things for SourceForge items Conferences/meetings Content meeting (TIGR, Nov. 15-16) minutes (Amelia, Jane) ongoing work as described in Nov 2005 report (immunology, self/non-self processes, interaction between organisms, cell death) Bio-Curator meeting, Asilomar Dec. 8-11 (Midori) UK chicken/cow meeting (Jen; see annotation outreach below) Preparations for PAG (Jen) GO Survey - further analysis in progress (Jane, with Rex Chisholm) Last bits of paperwork for grant year 6 (Midori) Comments on drafts for 5-year renewal (Midori, Jen) Mips2go mapping update almost done (Jane) (note: finished as of Jan. 10) Multifun2go mapping updated (Jane) Annotation outreach (Jen) Farm animal interest group started Involved in drafting new ChickGO Consortium plans Discussion with Shane Burgess about status of AgBase Attended UK chicken and cow meeting (Sanger) to discuss annotation possibilities Some updates to web pages (Amelia) Scripts (Amelia) Mailing list quiet GO Bibliography now has 677 entries Appendix: input from others on SF items closed this month 1111861, 1322922 - Val Wood (PSU), Erich Schwarz (WB) 1177217, 1307099, 1307327 - Several MOD curators, especially Doug Howe (ZFIN), Carol Bastiani, Erich Schwarz (WB), David Hill (MGI) 1199971 - Russ Collins (FB) 1284217 - Peifen Zhang (TAIR), Michelle Gwinn (TIGR), a bit from other MOD curators 1288640 - David Hill (MGI) 1348285 - Michelle Gwinn (TIGR) 1353409 - Michelle Gwinn (TIGR), Dr. Frederic Partensky 1365638 - Pascale Gaudet (DDB) 1234766 - Pascale Gaudet (DDB), Becky Foulger (UniProt) 1366304 - Alex Diehl (MGI) 1368335 - Alex Diehl (MGI) 1369320 - Val Wood (PSU) 1370167 - David Hill (MGI), Doug Howe (ZFIN) 1380320 - Val Wood (PSU) 1027565 - Becky Foulger (did the work while at FB); Victoria Petri (RGD)