Provides input for: Difference between revisions
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== Overview == | == Overview == | ||
The 'directly provides input for' relation is used to relate two GO Molecular Functions | *The 'directly provides input for' relation is used to relate two GO Molecular Functions when: | ||
**Two Molecular Functions succeed one another directly | |||
**The output of the first molecular function is an input of the second Molecular Function. | |||
The 'directly provides input for' relation is most commonly used between successive steps of a metabolic pathway. | |||
== | == Examples of Usage == | ||
'directly provides input' should be reserved to related successive Molecular Functions in GO-CAM models. | |||
*In glycolysis, triose phosphate isomerase activity (MF) 'directly provides input for' glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (MF). | |||
** triose phosphate isomerase activity converts dihydroxyacetone phosphate (input) to glyceraldehyde-3-phosphate (output) as part of glycolysis. Glyceraldehyde-3-phosphate dehydrogenase converts glyceraldehyde-3-phosphate (input) to 3-phosphonato-D-glyceroyl phosphate(4−) (output). | |||
**http://noctua.geneontology.org/editor/graph/gomodel:632cf60a00000208 | |||
*A glucose tansmembrane transporter activity (MF) 'directly provides input for' lactose synthase activity (MF). | |||
* | ** cytosolic glucose (input) is transported across the Golgi membrane to become Golgi-lumenal glucose (output). In the Golgi lumen the Golgi-lumenal glucose (input) is converted into lactose (output). | ||
**http://noctua.geneontology.org/editor/graph/gomodel:632cf60a00000239? | |||
== Quality Control Checks == | == Quality Control Checks == | ||
* Shex | |||
**<MolecularFunction> directly_provides_input_for: ( @<MolecularFunction> OR @<MolecularEvent> ) | |||
== Relations Ontology == | == Relations Ontology == | ||
| Line 20: | Line 26: | ||
== Review Status == | == Review Status == | ||
Last edited September 27, 2022 | |||
Last reviewed: May 11, 2018 | Last reviewed: May 11, 2018 | ||
Revision as of 09:14, 27 September 2022
Overview
- The 'directly provides input for' relation is used to relate two GO Molecular Functions when:
- Two Molecular Functions succeed one another directly
- The output of the first molecular function is an input of the second Molecular Function.
The 'directly provides input for' relation is most commonly used between successive steps of a metabolic pathway.
Examples of Usage
'directly provides input' should be reserved to related successive Molecular Functions in GO-CAM models.
- In glycolysis, triose phosphate isomerase activity (MF) 'directly provides input for' glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (MF).
- triose phosphate isomerase activity converts dihydroxyacetone phosphate (input) to glyceraldehyde-3-phosphate (output) as part of glycolysis. Glyceraldehyde-3-phosphate dehydrogenase converts glyceraldehyde-3-phosphate (input) to 3-phosphonato-D-glyceroyl phosphate(4−) (output).
- http://noctua.geneontology.org/editor/graph/gomodel:632cf60a00000208
- A glucose tansmembrane transporter activity (MF) 'directly provides input for' lactose synthase activity (MF).
- cytosolic glucose (input) is transported across the Golgi membrane to become Golgi-lumenal glucose (output). In the Golgi lumen the Golgi-lumenal glucose (input) is converted into lactose (output).
- http://noctua.geneontology.org/editor/graph/gomodel:632cf60a00000239?
Quality Control Checks
- Shex
- <MolecularFunction> directly_provides_input_for: ( @<MolecularFunction> OR @<MolecularEvent> )
Relations Ontology
Review Status
Last edited September 27, 2022 Last reviewed: May 11, 2018