Electronic jamboree july18-2008 (Archived)

Planning of the day

• On Thursday (or before!), US people can start looking at annotations for chosen gene sets
• UK people will meet at 9;30
• 3pm BST/10 am eastern/7 am pacific - conference call using webex and phone conference - link up with US on eastern and central time. discuss annotation issues that have arisen, go round the groups to find out if any species have found any interesting differences in their annotation set.
• 5pm/12 eastern/9 am pacific - west coast (PTZ) will join phone conference until 6 pm
• annotations are to be temporarily stored in the GOnuts wiki: http://gowiki.tamu.edu/wiki/index.php/Electronic_Jamboree

Suggested discussion topics

• Usage of the IC code (all UK curators)

Can IC annotations be created from ISS annotations? From the evidence code guide: ‘The IC evidence code is to be used for those cases where an annotation is not supported by any direct evidence, but can be reasonably inferred by a curator from other GO annotations, for which evidence is available.’

• • there is no direct mention that the evidence has to be experimental, however curators here have remembered that this might have been a requirement, but also allowing ISS as well?

If this is allowed, what would you add to the reference column? The PMID of the paper ISS’d data from? e.g. ATP-binding and ATPase activity

• General in defence adding ‘inhibitor binding’ to the GO (RL)

• Annotation_QC
• http://sourceforge.net/tracker/?group_id=36855&atid=1040173

Minutes

Jamboree 18 July 2008

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