Extensions/x-multi-organism

This XP augments XP:biological_process_xp_regulation

It "catches" some of the MOPs that do not conform to the strict "+/- regulation of PROCESS" grammar. The obol grammar is still incomplete, and there will be certain patterns that are not caught:

• regulation of qualities, such as levels of RNA in host
• non-conforming terms

It uses a small ontology of "organism roles" - parasite, symbiont etc

It also uses nested cross-products. This requires the creation of anonymous classes

See the go/scratch/xps directory

• xp obo file
• imports file - point oboedit at this

Missing Link Report:

• newlinks.txt

(not yet updated automatically)

This has some false positives. It is also redundant with the report generated here:

• regulates missing links

Ignore the anonymous classes in this report