Extensions/x-multi-organism
Synopsis
This XP augments XP:biological_process_xp_regulation
It "catches" some of the MOPs that do not conform to the strict "+/- regulation of PROCESS" grammar. The obol grammar is still incomplete, and there will be certain patterns that are not caught:
- regulation of qualities, such as levels of RNA in host
- non-conforming terms
It uses a small ontology of "organism roles" - parasite, symbiont etc - see the bottom of the xp obo file
Availability
See the go/scratch/xps directory
- xp obo file
- imports file - point oboedit at this
Results
Relations Uses
Missing Link Report
(not yet updated automatically)
This has some false positives. It is also redundant with the report generated here:
Ignore the anonymous classes in this report