Extensions/x-multi-organism

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Revision as of 20:11, 5 June 2008 by Cjm (talk | contribs)
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Synopsis

This XP augments XP:biological_process_xp_regulation

It "catches" some of the MOPs that do not conform to the strict "+/- regulation of PROCESS" grammar. The obol grammar is still incomplete, and there will be certain patterns that are not caught:

  • regulation of qualities, such as levels of RNA in host
  • non-conforming terms

It uses a small ontology of "organism roles" - parasite, symbiont etc - see the bottom of the xp obo file

Availability

See the go/scratch/xps directory

Results

Relations Uses


Missing Link Report

(not yet updated automatically)

This has some false positives. It is also redundant with the report generated here:


Ignore the anonymous classes in this report