FlyBase December 2014
1. Staff working on GOC tasks
Susan Tweedie (GO curator) 0.8 FTE
Helen Attrill (GO curator/literature curator) 0.35 FTE
Peter McQuilton (Literature curator)
Steven Marygold (Literature curator)
Gillian Millburn (Literature curator)
Raymund Stefancsik (Literature curator)
Kathleen Falls (Developer)
Andy Schroeder (Developer)
Total number of staff working on GOC tasks approx 1.5 FTE; total funded by NIH GO grant 0.
2. Annotation progress
Table showing progress in annotating Drosophila localized genes Nov 2013 - Nov 2014 (FB2013_06 - FB2014_06)
Nov 13 | Nov 14 | % change | % of total genes | |
---|---|---|---|---|
Total number of localized genes (excluding pseudogenes) | 16457 | 17382 | +5.6% | |
Localized genes with no GO annotation | 4655 | 4692 | +0.8% | 27.0% |
Localized genes with any GO annotation | 11802 | 12690 | +7.5% | 73.0% |
Localized genes with 1 or more term based on experimental evidence | 5786 | 6095 | +18.8% | 35.1% |
Localized genes with other non-IEA, non-ND evidence | 3733 | 3746 | +0.4% | 21.5% |
Localized genes with only IEA evidence | 1270 | 1074 | -15.4% | 6.2% |
Localized genes with only ND evidence | 1013 | 1775 | +75.2% | 10.2% |
Note there are 13827 predicted protein coding genes in Drosophila (FlyBase release FB2010_09 - November 19th 2010) GO annotation is available for an additional 340 genes that encode RNA products and 2085 genes that are not localised to the genome.
Table showing annotation progress since the start of the Reference Genome project in August 2006
August 2006 | October 2008 | November 2009 | November 2010 | % change since Nov 2009 | |
---|---|---|---|---|---|
Experimental evidence | 11888 | 17322 | 20057 | 24115 | +20.2% |
Computational evidence | 14946 | 15487 | 15493 | 15493 | 0% |
Author/curator statements | 16711 | 16506 | 16379 | 16308 | -0.4% |
Electronic annotation | 22626 | 16010 | 14923 | 15641 | +4.8% |
No biological data available | 4997 | 5022 | 4992 | 5422 | +8.6% |
Total annotations | 71168 | 70351 | 71844 | 76979 | +7.1% |