GO Central (GOC) QC Procedure: Difference between revisions
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===GO rules=== | ===GO rules=== | ||
* (Documentation in progress): https://github.com/geneontology/go-site/tree/master/metadata/rules | * (Documentation in progress): https://github.com/geneontology/go-site/tree/master/metadata/rules | ||
* The QC checks consist of either "filters" or " | * The QC checks consist of either "filters" or "warnings". | ||
** '''Filters''' exclude annotations from the files that the GO consortium pipeline generates | |||
** '''Warnings''' are reported in the GO rules errors, but annotations are still exported | |||
* '''GO rules reports''' | * '''GO rules reports''' | ||
** | ** [http://snapshot.geneontology.org/reports/gorule-report.html GO rule report - Snapshot]: Report groups should monitor daily or weekly | ||
** | ** [http://current.geneontology.org/reports/gorule-report.html GO rule report - Latest Official Monthly Release]: Errors present in our most up to date release | ||
== Status == | == Status == |
Latest revision as of 02:02, 20 April 2022
GO Central rules are documented here: https://github.com/geneontology/go-site/blob/master/metadata/rules/README.md
GO rules
- (Documentation in progress): https://github.com/geneontology/go-site/tree/master/metadata/rules
- The QC checks consist of either "filters" or "warnings".
- Filters exclude annotations from the files that the GO consortium pipeline generates
- Warnings are reported in the GO rules errors, but annotations are still exported
- GO rules reports
- GO rule report - Snapshot: Report groups should monitor daily or weekly
- GO rule report - Latest Official Monthly Release: Errors present in our most up to date release
Status
Last reviewed: 2022-04-20 Pascale Gaudet