GO stats-glossary

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aspect

==A==: all (biological_process + molecular_function + cellular_component) ==P==: biological_process ==F==: molecular_function ==C==: cellular_component

bioentitiy type

In the October 2019 release, the bioentity types used are:

  • protein
  • protein_complex
  • gene_product
  • gene
  • transcript
  • primary_transcript
  • tRNA
  • miRNA
  • antisense_lncRNA
  • snoRNA
  • rRNA
  • RNA
  • ncRNA
  • snRNA
  • scRNA
  • lnc_RNA
  • lincRNA
  • pseudogene
  • RNase_MRP_RNA
  • antisense_RNA
  • RNase_P_RNA
  • telomerase_RNA
  • tmRNA

RNA_cluster

Includes all types of RNAs: RNA, tRNA, miRNA, antisense_lncRNA, snoRNA, rRNA, ncRNA, snRNA, primary_transcript, scRNA, lnc_RNA, lincRNA, pseudogene, RNase_MRP_RNA, antisense_RNA, RNase_P_RNA, telomerase_RNA, tmRNA


evidence_cluster

==PHYLO==: IBA, IKR, IRD and IMR (retired) ==IEA==: IEA ==OTHER==: IC, ISA, ISM, ISO, ISS, NAS, RCA, TAS
 ==EXP==: EXP, IDA, IEP, IGC, IGI, IMP, IPI
 ==ND==: ND
 ==HTP==: HDA, HEP, HGI, HMP, HTP

filtered taxa

Taxa with > 1,000 annotations (including IEAs)

model_organism

Data sets labeled 'by_model_organims' contain data for human and 10 model organisms: NCBITaxon:9606, Homo sapiens NCBITaxon:10116|Rattus norvegicus NCBITaxon:10090|Mus musculus NCBITaxon:3702|Arabidopsis thaliana NCBITaxon:7955|Danio rerio NCBITaxon:6239|Caenorhabditis elegans NCBITaxon:559292|Saccharomyces cerevisiae S288C NCBITaxon:7227|Drosophila melanogaster NCBITaxon:44689|Dictyostelium discoideum NCBITaxon:4896|Schizosaccharomyces pombe NCBITaxon:83333|Escherichia coli K-12


Review Status

Last reviewed: October 18, 2019