Difference between revisions of "January/February 2010 lung targets"

From GO Wiki
Jump to navigation Jump to search
m
 
(26 intermediate revisions by 6 users not shown)
Line 1: Line 1:
[[Category:Lung Development Genes]]
==January/February 2010 targets==
==January/February 2010 targets==


Line 25: Line 26:
| 2 genes - no EXP
| 2 genes - no EXP
| done (2)
| done (2)
|  
| done
|no Zfish gene
|no Zfish gene
|
|done (1)
|no EXP
|no EXP
|done
|done
|
|done
|done (2)
|done (2)
|-
|-
Line 40: Line 41:
| no Dicty
| no Dicty
| -
| -
|
| no worm
| done (1)
| done (1)
|
|
|no EXP
|no EXP
|
|done
|
|done
|done (2)
|done (2)
|-
|-
Line 55: Line 56:
| 1 gene - no EXP
| 1 gene - no EXP
| -
| -
|no worm
| no worm
| done (2)
| done (2)
|no fly
|no fly
|no EXP
|no EXP
|
|done
|
|done
|done (2)
|done (2)
|-
|-
Line 70: Line 71:
| no Dicty
| no Dicty
| -
| -
|no worm
| no worm
| done (1)
| done (1)
|no fly
|no fly
|
|
|
|done
|
|done
|1 done, 1 first-pass only (Q15389)
|done (2)
|-
|-
|http://wiki.geneontology.org/index.php/ANXA3
|http://wiki.geneontology.org/index.php/ANXA3
Line 85: Line 86:
| 1 gene - done
| 1 gene - done
| done (2)
| done (2)
| done (3/4) - also waiting on term requests
| done (3/4)
| done (4)
| done (4)
|
|
|
|
|
|done
|
|done
|done (2)
|done (2)
|-
|-
Line 104: Line 105:
|
|
|
|
|
|done
|
|done
|in progress
|done (1)
|-
|-
|http://wiki.geneontology.org/index.php/CDKN2  
|http://wiki.geneontology.org/index.php/CDKN2  
Line 119: Line 120:
|no fly
|no fly
|
|
|
|1 of 3 done, Cdkn2a, 2b in progress
|
|done
|done (3)
|done (3)
|-
|-
Line 134: Line 135:
|no fly
|no fly
|no EXP
|no EXP
|
|done
|
|done
|done (1)
|done (1)
|-
|-
Line 149: Line 150:
|
|
|
|
|
|1 of 2 done, Dusp6 in progress
|
|done
|done (2)
|done (2)
|-
|-
Line 164: Line 165:
|no fly
|no fly
|
|
|
|in progress
|
|done
|done (2)
|done (2)
|-
|-
Line 179: Line 180:
|
|
|
|
|
|done
|
|done
|
|done (1)
|-
|-
|http://wiki.geneontology.org/index.php/HMGB2
|http://wiki.geneontology.org/index.php/HMGB2
|HMGB2
|HMGB2
| -
| -
|
| done (6)
| - (3 genes here but ortholog predictions inc, not appropriate for annotation tf)
| - (3 genes here but ortholog predictions inc, not appropriate for annotation tf)
| 1 gene, no EXP
| 1 gene, no EXP
Line 194: Line 195:
|
|
|
|
|
|12 of 14 done, Hmgb1 and Hmgb2 in progress
|
|done
|
|done (2)
|-
|-
|http://wiki.geneontology.org/index.php/PLEKHA2
|http://wiki.geneontology.org/index.php/PLEKHA2
Line 210: Line 211:
|no EXP
|no EXP
|done
|done
|
|done
|done (2)
|done (2)
|-
|-
Line 225: Line 226:
|no EXP
|no EXP
|done
|done
|
|done
|done (2)
|done (2)
|-
|-
Line 239: Line 240:
|no fly
|no fly
|no Gallus
|no Gallus
|
|done
|
|done
|
|done (2)
|-
|-
|http://wiki.geneontology.org/index.php/SERPINE1
|http://wiki.geneontology.org/index.php/SERPINE1
Line 254: Line 255:
|no fly
|no fly
|
|
|
|1 of 2 done, Serpine1 in progress
|
|done
|in progress
|done (2)
|-
|-
|http://wiki.geneontology.org/index.php/TAP2_RefG
|http://wiki.geneontology.org/index.php/TAP2_RefG
Line 269: Line 270:
|done (1) no EXP
|done (1) no EXP
|
|
|
|2 of 3 done, Tap2 in progress
|
|done
|2 of 3 done
|done (3)
|-
|-
|http://wiki.geneontology.org/index.php/THBS3
|http://wiki.geneontology.org/index.php/THBS3
Line 284: Line 285:
|done (3) EXP
|done (3) EXP
|
|
|
|2 of 3 done, Thbs1 in progress
|
|done
|done (3)
|done (3)
|-
|-

Latest revision as of 16:55, 8 April 2014

January/February 2010 targets

Annotation Progress - High priority targets are in red

link to family members set label E.coli SGD S. pombe dictyBase TAIR WormBase Zebrafish FlyBase Chicken MGI RGD Human
http://wiki.geneontology.org/index.php/ACER2 ACER2 - done (2) - 2 genes - no EXP done (2) done no Zfish gene done (1) no EXP done done done (2)
http://wiki.geneontology.org/index.php/ADCY7 ADCY7 - - - no Dicty - no worm done (1) no EXP done done done (2)
http://wiki.geneontology.org/index.php/ALOX5AP_RefG ALOX5AP - - - 1 gene - no EXP - no worm done (2) no fly no EXP done done done (2)
http://wiki.geneontology.org/index.php/ANGPT1 ANGPT1 - - - no Dicty - no worm done (1) no fly done done done (2)
http://wiki.geneontology.org/index.php/ANXA3 ANXA3 - - - 1 gene - done done (2) done (3/4) done (4) done done done (2)
http://wiki.geneontology.org/index.php/AQP1 AQP1 aqpZ (in progress) - - 5 genes no EXP (aqpA, wacA, done) 8 (in progress) done (1) done done done (1)
http://wiki.geneontology.org/index.php/CDKN2 CDKN2A, CDKN2B - - - no Dicty - no worm done (1) no fly 1 of 3 done, Cdkn2a, 2b in progress done done (3)
http://wiki.geneontology.org/index.php/COL4A4 COL4A4 - - - no Dicty - no worm no zfish gene no fly no EXP done done done (1)
http://wiki.geneontology.org/index.php/DUSP6 DUSP6 ynbD (in progress) done (4) in progress (2) 2/7 have EXP, mpl1 done, dupA to finish done (5) done done (2) 1 of 2 done, Dusp6 in progress done done (2)
http://wiki.geneontology.org/index.php/ENG_RefG ENG - - - no Dicty - no worm Only Ensembl gene, matches nothing in zfin, done no fly in progress done done (2)
http://wiki.geneontology.org/index.php/GSTT1 GSTT1 - - - 2 genes - no EXP no worm done (2) done done done (1)
http://wiki.geneontology.org/index.php/HMGB2 HMGB2 - done (6) - (3 genes here but ortholog predictions inc, not appropriate for annotation tf) 1 gene, no EXP - done (6) 12 of 14 done, Hmgb1 and Hmgb2 in progress done done (2)
http://wiki.geneontology.org/index.php/PLEKHA2 PLEKHA2 - - - 1 gene, no EXP - no worm done (1) no fly no EXP done done done (2)
http://wiki.geneontology.org/index.php/S100A13 S100A13 - - - no Dicty - no worm done (1) no fly no EXP done done done (2)
http://wiki.geneontology.org/index.php/SERPINB9 SERPINB9 - - - no Dicty - no worm no zfish gene no fly no Gallus done done done (2)
http://wiki.geneontology.org/index.php/SERPINE1 SERPINE1 - - - no Dicty - worm done (1) no fly 1 of 2 done, Serpine1 in progress done done (2)
http://wiki.geneontology.org/index.php/TAP2_RefG TAP2 2 (mdlA & msbA), to do done (2) done (1) 2 genes (tagA, abcB1), to do done (2) done (3) done (1) no EXP 2 of 3 done, Tap2 in progress done done (3)
http://wiki.geneontology.org/index.php/THBS3 THBS3 - - - no Dicty - done (6) done (3) EXP 2 of 3 done, Thbs1 in progress done done (3)

Back to Reference_Genome_Annotation_Project Reference Genome Main Page