Difference between revisions of "Lung branching morphogenesis genes (Archived)"

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|in progress(8/91)
|in progress(8/91 in)
|1 of 2 done
|1 of 2 done

Revision as of 13:42, 26 March 2010

This set of genes was selected to support knowledge representation for the biological process of ‘branching involved in lung morphogenesis’. The MGI group supplied the initial gene set of 12 genes based on recent MGI PI interest in branching morphogenesis and lung development. The branching terminology has been recently updated, and curation of mouse papers concerned with branching morphogenesis resulted in the gene set provided here. The set of 12 genes contributing to this biological process is thus considered complete at this time. Because two of the 12 genes [Shh and Fgf10] had previously been selected for comprehensive annotation, they are not included in Dec 2009 target list.

December 2009 targets

Annotation Progress

High priority targets are in red

Panther ID set label E.coli SGD S. pombe dictyBase TAIR WormBase Zebrafish FlyBase Chicken MGI RGD Human
http://wiki.geneontology.org/index.php/PTHR21559 Dag1 - - - no Dicty - done (1 of 4) in progress(4 in) done
http://wiki.geneontology.org/index.php/PTHR11829 Foxf1a (family also assigned in November 2009) - done(4) done but not appropriate for functional transfer no Dicty - done(1) done no EXP done done (1)
http://wiki.geneontology.org/index.php/PTHR24316 Rdh10 - - - no Dicty - done (only 1/2 with EXP) done done(3) no EXP done done done (1)
http://wiki.geneontology.org/index.php/PTHR11848 Bmp4 - - - no Dicty - in progress in progress(25/62 in) done 1 of 2 done
http://wiki.geneontology.org/index.php/PTHR24324 Hhex - - - no Dicty - done(1) No D.rerio done (1) done done done (1)
http://wiki.geneontology.org/index.php/PTHR24326 Hoxa5 - done - no Dicty done(2) no EXP done done done (3)
http://wiki.geneontology.org/index.php/PTHR23315 Ctnnb1 - done done no Dicty done(2) done (1) done in progress(8/91 in) done 1 of 2 done
http://wiki.geneontology.org/index.php/PTHR12027 Wnt2/2b - - - no Dicty - partially done done 3 of 4 done, Wtn5a in progress (17 in) done done (4)
http://wiki.geneontology.org/index.php/PTHR10574 Lama1 - - - no Dicty - No elegans no fly done done done (1)