Lung development genes: Difference between revisions
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[[Category:Lung Development Genes]] | |||
The MGI group supplied the initial gene set of 14 genes based on recent MGI PI interest in lung development. | The MGI group supplied the initial gene set of 14 genes based on recent MGI PI interest in lung development. | ||
Annotation Progress | ==November 2009 targets== | ||
Annotation Progress - - <font color ="red"> High priority targets are in red</font> | |||
{|border="1" cell spacing="0" cellpadding="5" align="center" | {|border="1" cell spacing="0" cellpadding="5" align="center" | ||
!Panther ID | !Panther ID | ||
Line 18: | Line 21: | ||
!Human | !Human | ||
|- | |- | ||
|PTHR13935 | |http://wiki.geneontology.org/index.php/PTHR13935 | ||
|Ascl1 | |Ascl1 | ||
| - | |||
| - | |||
| | | | ||
| - | |||
|done(3) | |||
| | | | ||
| | | | ||
| | | | ||
| | | | ||
| | |(1/2 done) | ||
| | |done | ||
| | |done (2) | ||
|- | |- | ||
|PTHR11486 | |http://wiki.geneontology.org/index.php/PTHR11486 | ||
|Fgf8/10 | |<font color ="red">Fgf8/10</font> | ||
| | | - | ||
| | | - | ||
| | | | ||
| - | |||
| - | |||
|done | |||
| | | | ||
| | | | ||
| | | | ||
|key features in (21/37) | |||
|done | |||
|done (2) | |||
|- | |- | ||
|PTHR11829 | |http://wiki.geneontology.org/index.php/PTHR11829 | ||
|Foxa2 | |Foxa2 (also assigned in December) | ||
| | | - | ||
| | | done(4) | ||
| | | done but not appropriate for functional transfer | ||
| | | - | ||
| | | - | ||
| | |done(1) | ||
| | |done | ||
| | | | ||
| | | | ||
| | | | ||
|done | |||
|done (1) | |||
|- | |- | ||
|PTHR10071 | |http://wiki.geneontology.org/index.php/PTHR10071 | ||
|Gata6 | |Gata6 | ||
| - | |||
|done (4) | |||
|done but not appropriate for functional transfer | |||
|done (1) | |||
|done(21) | |||
| | | | ||
| | | | ||
Line 70: | Line 78: | ||
| | | | ||
| | | | ||
| | |done | ||
| | | | ||
|- | |- | ||
|PTHR19818 | |http://wiki.geneontology.org/index.php/PTHR19818 | ||
|Gli2/3 | |Gli2/3 | ||
| - | |||
| - | |||
|done (1), but likely mis prediction | |||
|done (2) | |||
| - | |||
|done(2) | |||
| | | | ||
| | | | ||
| | | | ||
| | | | ||
| | |done | ||
| | |done (2) | ||
|- | |- | ||
|PTHR24083 | |http://wiki.geneontology.org/index.php/PTHR24083 | ||
|Hnf4a | |Hnf4a | ||
| - | |||
| - | |||
| - | |||
| - | |||
| - | |||
|done(2) | |||
|done | |||
| | | | ||
| | | | ||
| | | | ||
| | |done | ||
| | |done (1) | ||
|- | |- | ||
|PTHR24416 | |http://wiki.geneontology.org/index.php/PTHR24416 | ||
|Kdr | |Kdr | ||
| - | |||
| - | |||
| - | |||
| - | |||
| - | |||
| | | | ||
|done | |||
| | | | ||
| | | | ||
| | | | ||
| | |done | ||
| | | | ||
|- | |- | ||
|PTHR24340 | |http://wiki.geneontology.org/index.php/PTHR24340 | ||
|Nkx2-1 | |Nkx2-1 | ||
| - | |||
| - | |||
| - | |||
| - | |||
| - | |||
| | | | ||
| | | | ||
| | | | ||
| | | | ||
| | |done | ||
| | |done | ||
| | |done (2) | ||
|- | |- | ||
|PTHR10796 | |http://wiki.geneontology.org/index.php/PTHR10796 | ||
|Ptch1 | |Ptch1 | ||
| - | |||
| done(1) | |||
| - | |||
|done (2) | |||
|done(2) | |||
|done(3) | |||
| | | | ||
| | | | ||
| | | | ||
| | | | ||
| | |done | ||
| | | | ||
|- | |- | ||
|PTHR24082 | |http://wiki.geneontology.org/index.php/PTHR24082 | ||
|Rara | |Rara | ||
| - | |||
| - | |||
| - | |||
| - | |||
| - | |||
|done(3) | |||
| | | | ||
| | | | ||
| | | | ||
| | | | ||
| | |done | ||
| | |done (2) | ||
|- | |- | ||
|PTHR10270 | |http://wiki.geneontology.org/index.php/PTHR10270 | ||
|Sox18 | |Sox18 (Sox8?) | ||
| | | - | ||
| | | done(1) | ||
| | |done but not appropriate for functional transfer | ||
| | |done(5) | ||
| | |done(1) | ||
| | |done(2) | ||
| | |done | ||
| | | | ||
| | | | ||
|done | |||
|done | |||
|done (4) | |||
|- | |- | ||
|PTHR12025 | |http://wiki.geneontology.org/index.php/PTHR12025 | ||
|Vegfa | |Vegfa | ||
| - | |||
| - | |||
| - | |||
| - | |||
| - | |||
| | | | ||
| | | | ||
Line 189: | Line 198: | ||
| | | | ||
| | | | ||
| | |done | ||
| | |1 of 3 done | ||
|- | |- | ||
|} |
Latest revision as of 16:24, 8 April 2014
The MGI group supplied the initial gene set of 14 genes based on recent MGI PI interest in lung development.
November 2009 targets
Annotation Progress - - High priority targets are in red
Panther ID | set label | E.coli | SGD | S. pombe | dictyBase | TAIR | WormBase | Zebrafish | FlyBase | Chicken | MGI | RGD | Human |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
http://wiki.geneontology.org/index.php/PTHR13935 | Ascl1 | - | - | - | done(3) | (1/2 done) | done | done (2) | |||||
http://wiki.geneontology.org/index.php/PTHR11486 | Fgf8/10 | - | - | - | - | done | key features in (21/37) | done | done (2) | ||||
http://wiki.geneontology.org/index.php/PTHR11829 | Foxa2 (also assigned in December) | - | done(4) | done but not appropriate for functional transfer | - | - | done(1) | done | done | done (1) | |||
http://wiki.geneontology.org/index.php/PTHR10071 | Gata6 | - | done (4) | done but not appropriate for functional transfer | done (1) | done(21) | done | ||||||
http://wiki.geneontology.org/index.php/PTHR19818 | Gli2/3 | - | - | done (1), but likely mis prediction | done (2) | - | done(2) | done | done (2) | ||||
http://wiki.geneontology.org/index.php/PTHR24083 | Hnf4a | - | - | - | - | - | done(2) | done | done | done (1) | |||
http://wiki.geneontology.org/index.php/PTHR24416 | Kdr | - | - | - | - | - | done | done | |||||
http://wiki.geneontology.org/index.php/PTHR24340 | Nkx2-1 | - | - | - | - | - | done | done | done (2) | ||||
http://wiki.geneontology.org/index.php/PTHR10796 | Ptch1 | - | done(1) | - | done (2) | done(2) | done(3) | done | |||||
http://wiki.geneontology.org/index.php/PTHR24082 | Rara | - | - | - | - | - | done(3) | done | done (2) | ||||
http://wiki.geneontology.org/index.php/PTHR10270 | Sox18 (Sox8?) | - | done(1) | done but not appropriate for functional transfer | done(5) | done(1) | done(2) | done | done | done | done (4) | ||
http://wiki.geneontology.org/index.php/PTHR12025 | Vegfa | - | - | - | - | - | done | 1 of 3 done |