MENGO Enzyme activity: Difference between revisions

From GO Wiki
Jump to navigation Jump to search
No edit summary
No edit summary
Line 450: Line 450:


PMID:7972516
PMID:7972516
[GOC:MENGO_EP]
====GO:XXXXXX67 : Trans-sialidase activity====
namespace: molecular_function
def:  catalyze the hydrolysis of alpha-(2->3)-, alpha-(2->6)-, alpha-(2->8)- glycosidic linkages of terminal sialic acid residues in oligosaccharides, glycoproteins, glycolipids, colominic acid and synthetic substrates. Trans-sialidase preferring the transfer of sialic acids from sialoglycoconjugates to beta-galactosyl acceptor molecules
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds
EC 2.4.1.-
PMID: 8405811, 7826016
[GOC:MENGO_EP]
====GO:XXXXXX68 : α-1,4-mannosidase activity====
namespace: molecular_function
def:  catalyze the hydrolysis of α-1,4 linkage of the terminal, non-reducing α-D-mannose residues in α-D-mannosides
[GOC:MENGO_EP]
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds
EC 3.2.1.-PMID: 20081828
[GOC:MENGO_EP]
====GO:XXXXXX69 : β-1,3-mannanase activity====
namespace: molecular_function
def:  catalyze the hydrolysis beta-1,3-linkages of  mannan, releasing mannose.
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds
EC 3.2.1.-
PMID: 20030048
[GOC:MENGO_EP]
====GO:XXXXXX70 :  β-6-SO3-N-acetylglucosaminidase activity====
namespace: molecular_function
def:  catalyze cleaving of the terminal 2-acetamido-2-deoxy-beta-D-glucopyranoside 6-sulfate (6-SO3-GlcNAc) residues from sulfomucin
is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds
EC 3.2.1.-
PMID : 15716424


[GOC:MENGO_EP]
[GOC:MENGO_EP]

Revision as of 13:54, 14 June 2011

Working Group Members

Trudy_5/10/11

MOLECULAR FUNCTION ONTOLOGY

GO:XXXXXX14:hemicellulase activity

namespace: molecular_function

def: catalysis of the breakdown of hemicellulose, a plant cell wall polysaccharidesthat have a backbone of 1,4-linked beta-D-pyranosyl residues in which O4 is in the equatorial orientation

is_a : GO:0016787: hydrolase activity

[GOC:MENGO_TT]

GO:XXXXXX15:exo-1,4-β-d- xylanases activity

namespace: molecular_function

def: catalysis of the hydrolysis of (1→4)-β-D-xylans, to remove successive D-xylose residues from the non-reducing termini

is_a :GO:004553 hydrolase activity, hydrolyzing O-glycosyl compounds

[GOC:MENGO_TT]

GO:XXXXXX16:1,4-β-d- mannosidase activity

namespace: molecular_function

def: catalysis of the hydrolysis of 1,4-beta-D-mannosidic linkages in mannans, galactomannans and glucomannans

is_a :GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds

[GOC:MENGO_TT]

GO:XXXXXX143:sinapyl alcohol dehydrogenase activity

namespace: molecular function

def: catalysis of the reduction of hydroxycinnamaldehydes

is_a: GO:0003824 catalytic activity

synonym: SAD activity [GOC:MENGO_TT]


Endang_05/26/11

Polysaccharide Lyase

GO:XXXXXX43 : Acharan sulfate lyase activity

namespace: molecular_function

def: Catalysis of the cleavage of a carbon-oxygen bond of acharan sulfate, a uniformly repeating disaccharide structure of α-d-n-acetylglucosaminyl-2-O-sulfo-α-l-iduronic acid, by the elimination of a alcohol.

is_a : GO:0016835! carbon-oxygen lyase activity

[GOC:MENGO_EP]

GO:XXXXXX44 : Exooligoalginate lyase activity

namespace: molecular_function

def: Catalysis of the cleavage of a carbon-oxygen bond by the elimination of an alcohol from an oligoalginate

is_a : GO:0016835! carbon-oxygen lyase activity

[GOC:MENGO_EP]


GO:XXXXXX45 : Gellan lyase activity

namespace: molecular_function

def: Catalysis of the cleavage of a carbon-oxygen bond by the elimination of an alcohol from a gellan, a linear repeating tetrasaccharide ->3-beta-D-Glc-(134)-beta-D-GlcA-(134)-beta-D-Glc-(134)-alpha-L-Rha-(13] composed of D-glucose (Glc), D-glucuronic acid (GlcA), and L-rhamnose (Rha).

is_a : GO:0016835! carbon-oxygen lyase activity

[GOC:MENGO_EP]


GO:XXXXXX46 : Ulvan lyase activity

namespace: molecular_function

def: Catalysis of the cleavage of a carbon-oxygen bond by the elimination of an alcohol from ulvan, a repeating structure of ->4)-beta-D-GlcA-(1,4)-alpha-L-Rha 3S-(1,4)-alpha-L-IdoA-(1,4)-alpha-L-Rha 3S-(1->

is_a : GO:0016835! carbon-oxygen lyase activity

[GOC:MENGO_EP


Carbohydrate Esterase

GO:XXXXXX37 : 4-O-methyl-glucuronoyl methylesterase activity

namespace: molecular_function

def: Catalysis of the hydrolysis of a 4-O-methyl-D-glucuronoic acid to give methanol and glucuronic acid

is_a : GO:0052689! carboxylic ester hydrolase

[GOC:MENGO_EP]


GO:XXXXXX38 : Brefeldin A esterase activity

namespace: molecular_function

def: Catalysis of the hydrolysis of brefeldin A (γ,4- dihydroxy- 2-(6-hydroxy-1-heptenyl)- 4-cyclopentanecrotonic acid λ-lactone) to give brefeldin A acid

is_a : GO:0052689! carboxylic ester hydrolase

[GOC:MENGO_EP]


GO:XXXXXX39 : Chitooligosaccharide deacetylase activity

namespace: molecular_function

def: Catalysis of the hydrolysis of chitooligosaccharide deacetylase to give oligochitosan and acetic acid

is_a : GO:0052689! carboxylic ester hydrolase

[GOC:MENGO_EP]


GO:XXXXXX40 : Diacetylchitobiose deacetylase activity

namespace: molecular_function

def: Catalysis of the hydrolysis of a diacetylchitobiose ester to give chitobiose and acetic acid

is_a : GO:0052689! carboxylic ester hydrolase

[GOC:MENGO_EP]


GO:XXXXXX41 : N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-α-D-glucopyranoside deacetylase activity

namespace: molecular_function

def: Catalysis of the hydrolysis of N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-α-D-glucopyranoside ester to give 1-D-myo-inosityl-2-amino-2-deoxy-α-D-glucopyranoside and acetic acid

is_a : GO:0052689! carboxylic ester hydrolase

[GOC:MENGO_EP]


GO:XXXXXX42 : Pectin acetylesterase activity

namespace: molecular_function

def: Catalysis of the hydrolysis of pectin acetyl ester to give pectate and ethanol

is_a : GO:0052689! carboxylic ester hydrolase

[GOC:MENGO_EP]


Glycoside Hydrolase

GO:XXXXXX47 : 2-keto-3-deoxynononic acid sialidase activity

namespace: molecular_function

def: Catalysis of the hydrolysis of of the glycosidic linkage of 2-keto-3-deoxynononic acid

is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds

[GOC:MENGO_EP]

GO:XXXXXX48 : Amylopullulanase activity

namespace: molecular_function

def: catalysis of the hydrolysis of the α-1,4 glycosidic linkage of amylopullulanase====

is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds

PMID: 10091322, 19111640

[GOC:MENGO_EP]


GO:XXXXXX49 : Baicalin beta-D-glucuronidase activity

namespace: molecular_function

def: catalyze the hydrolysis of baicalin ((2S,3S,4S,5R,6S)-6-(5,6-dihydroxy-4-oxo-2-phenyl-chromen-7-yl)oxy-3,4,5-trihydroxy-tetrahydropyran-2-carboxylic acid) to baicalein and D-glucuronate

is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds

(EC 3.2.1.167)

[GOC:MENGO_EP]


GO:XXXXXX50 : Chitobiose phosphorylase activity

namespace: molecular_function

def: catalyze the hydrolysis of chitobiose phosphate to chitobiose and phosphate

is_a : GO:000464! phosphorylase activity

(EC 2.4.1.-)

[GOC:MENGO_EP]


GO:XXXXXX51 : Chondroitin hydrolase activity

namespace: molecular_function

def: catalyze the hydrolysis of chodroitin, a linear polymer structure composed of the repeating disaccharide unit –4GlcUA1-3GalNAc1–, where GlcUA represents D-glucuronic acid and GalNAc represents N-acetyl-D-galactosaminet.

is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds

(EC 2.4.1.-)

PMID:18390555

[GOC:MENGO_EP]


GO:XXXXXX52 : Concanavalin B activity

namespace: molecular_function

def: Concanavalin B is a glycoside hydrolases that are both catalytically active chitinases (EC 3.2.1.14) and endo-β-N-acetylglucosaminidases (EC 3.2.1.96) and also sub-families of non-hydrolytic proteins that function as carbohydrate binding modules / "lectins" or as xylanase inhibitors.

is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds

(EC 3.2.1.14) and (EC 3.2.1.96)

[GOC:MENGO_EP]


GO:XXXXXX53 : Narbonin activity

namespace: molecular_function

def: is a glycoside hydrolases that is predicted to have chitinases (EC 3.2.1.14) activity

is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds

(EC 3.2.1.14)

[GOC:MENGO_EP]


GO:XXXXXX54 : d-4,5 unsaturated β-glucuronyl hydrolase activity

namespace: molecular_function

def: catalyze the hydrolysis of d-4,5 unsaturated β-glucuronate.

is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds

EC 3.2.1.-

PMID:12729728

[GOC:MENGO_EP]


GO:XXXXXX55 : Endo-processive cellulases activity

namespace: molecular_function

def: catalyze the hydrolysis of cellulose and the degradation of the cellulose chain continue after an initial endohydrolase-attack. This enzyme family are inverting glycosidases, which preferentially attack the reducing end of the substrate.

is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds

EC 3.2.1.-

PMID: 18035374

[GOC:MENGO_EP]


GO:XXXXXX56 : Endorhamnosidase activity

namespace: molecular_function

def: catalyze the hydrolysis of rhamnose by cleaving its α-L-1,3 linkage

is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds

EC 3.2.1.-

PMID: 383902, 10439404

[GOC:MENGO_EP]


GO:XXXXXX57 : Endo-xylogalacturonan hydrolase activity

namespace: molecular_function

def: catalyze the hydrolysis of xylogalacturonate (XGA), a chain of α-(1 → 4)-linked d-galacturonic acid, which is substituted with β-d-xylose at the O-3 position, by cleaving its α-(1 → 4)-linkage.

is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds

EC 3.2.1.-

PMID:10618200

[GOC:MENGO_EP]


GO:XXXXXX58 : Exo-β-glucosaminidase activity

namespace: molecular_function

def: Catalyze the hydrolysis of chitosan or chitosan oligosaccharides to remove successive D-glucosamine residues from the non-reducing termini

is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds

EC 3.2.1.165

PMID: 16349528, 16316314, 16636831

[GOC:MENGO_EP]

GO:XXXXXX59 : Type C lysozyme activity

namespace: molecular_function

def: Catalyze the hydrolysis hydrolysis of 1,4-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues in a peptidoglycan and between N-acetyl-D-glucosamine residues in chitodextrins. C-type lysozymes are closely related to alpha-lactalbumin in sequence and structure.

is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds

EC 3.2.1.17

PMID: 8765309, 20420912

[GOC:MENGO_EP]


GO:XXXXXX60 : Type i (invertebrate) lysozyme activity

namespace: molecular_function

def: Catalyze the hydrolysis hydrolysis of 1,4-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues in a peptidoglycan and between N-acetyl-D-glucosamine residues in chitodextrins.

is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds

EC 3.2.1.17

PMID: 11965437

[GOC:MENGO_EP]


GO:XXXXXX61 : Maltopentaose-forming α-amylase activity

namespace: molecular_function

def: catalyze the hydrolysis of alpha-bonds of large alpha-linked polysaccharides such as starch and glycogen, yielding maltopentaose.

is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds

EC EC 3.2.1.1

PMID:1368136, 1714389

[GOC:MENGO_EP]


GO:XXXXXX62 : Maltotriose-forming α-amylase activity

namespace: molecular_function

def: catalyze the hydrolysis of alpha-bonds of large alpha-linked polysaccharides such as starch and glycogen, yielding maltotriose.

is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds

EC 3.2.1.116

PMID: 7511484, 9406414

[GOC:MENGO_EP]


GO:XXXXXX63 : Mannosyl-oligosaccharide α-1,3-mannosidase activity

namespace: molecular_function

def: catalyze the hydrolysis of alpha-1,3-bonds of mannosyl-oligosaccharide

is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds

EC EC 3.2.1.-

PMID: 2338081, 1849817

[GOC:MENGO_EP]


GO:XXXXXX64 : Mannosyl-oligosaccharide α-1,6-mannosidase activity

namespace: molecular_function

def: catalyze the hydrolysis of alpha-1,6-bonds of mannosyl-oligosaccharide

is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds

EC EC 3.2.1.-

PMID: 2338081, 1849817

[GOC:MENGO_EP]


GO:XXXXXX65 : Reuteransucrase activity

namespace: molecular_function

def: catalyze the synthesis of reuteransucrase a unique soluble glucan (reuteran) with mainly alpha-(1-->4) glucosidic linkages.

is_a : GO:0016758 ! Transferase activity, transferring hexosyl groups

EC 2.4.1.-

PMID: 15256553, 16000808

[GOC:MENGO_EP]


GO:XXXXXX66 : Rhamnogalacturonan α-L-rhamnopyranohydrolase activity

namespace: molecular_function

def: catalyze the hydrolysis of terminal non-reducing alpha-L-rhamnose residues in rhamnogalaturonan

is_a : GO:0016758 ! Transferase activity, transferring hexosyl groups

EC 3.2.1.40

PMID:7972516

[GOC:MENGO_EP]


GO:XXXXXX67 : Trans-sialidase activity

namespace: molecular_function

def: catalyze the hydrolysis of alpha-(2->3)-, alpha-(2->6)-, alpha-(2->8)- glycosidic linkages of terminal sialic acid residues in oligosaccharides, glycoproteins, glycolipids, colominic acid and synthetic substrates. Trans-sialidase preferring the transfer of sialic acids from sialoglycoconjugates to beta-galactosyl acceptor molecules

is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds

EC 2.4.1.-

PMID: 8405811, 7826016

[GOC:MENGO_EP]


GO:XXXXXX68 : α-1,4-mannosidase activity

namespace: molecular_function

def: catalyze the hydrolysis of α-1,4 linkage of the terminal, non-reducing α-D-mannose residues in α-D-mannosides [GOC:MENGO_EP]

is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds

EC 3.2.1.-PMID: 20081828

[GOC:MENGO_EP]


GO:XXXXXX69 : β-1,3-mannanase activity

namespace: molecular_function

def: catalyze the hydrolysis beta-1,3-linkages of mannan, releasing mannose.

is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds

EC 3.2.1.-

PMID: 20030048

[GOC:MENGO_EP]


GO:XXXXXX70 : β-6-SO3-N-acetylglucosaminidase activity

namespace: molecular_function

def: catalyze cleaving of the terminal 2-acetamido-2-deoxy-beta-D-glucopyranoside 6-sulfate (6-SO3-GlcNAc) residues from sulfomucin

is_a : GO:0004553! Hydrolase activity, hydrolyzing O-glycosyl compounds

EC 3.2.1.-

PMID : 15716424

[GOC:MENGO_EP]