MENGO Hydrogen biosynthesis

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Working group


Trudy_06/23/11

GO:XXXXXX146 :hydrogenase mediated hydrogen biosynthesis

namespace: biological_process

def:

is_a :

http://www.fao.org/docrep/w7241e/w7241e0g.htm [GOC:MENGO_TT]

GO:XXXXXX146 :regulation of hydrogenase mediated hydrogen biosynthesis

namespace: biological_process

def:

is_a :

http://www.fao.org/docrep/w7241e/w7241e0g.htm [GOC:MENGO_TT]


GO:XXXXXX146 :positive regulation of hydrogenase mediated hydrogen biosynthesis

namespace: biological_process

def:

is_a :

http://www.fao.org/docrep/w7241e/w7241e0g.htm [GOC:MENGO_TT]

GO:XXXXXX146 :negative regulation of hydrogenase mediated hydrogen biosynthesis

namespace: biological_process

def:

http://www.fao.org/docrep/w7241e/w7241e0g.htm

[GOC:MENGO_TT]

GO:XXXXXX146 :nitrogenase mediated hydrogen biosynthesis

namespace: biological_process

def:

is_a :

http://www.fao.org/docrep/w7241e/w7241e0g.htm

[GOC:MENGO_TT]

GO:XXXXXX146 :regulation of nitrogenase mediated hydrogen biosynthesis

namespace: biological_process

def:

is_a : [GOC:MENGO_TT]

GO:XXXXXX146 :positive regulation of nitrogenase mediated hydrogen biosynthesis

namespace: biological_process

def:

is_a :

[GOC:MENGO_TT]

GO:XXXXXX146 :negative positive regulation of nitrogenase mediated hydrogen biosynthesis

namespace: biological_process

def:

is_a :

[GOC:MENGO_TT]


GO:XXXXXX146 bioynthesis of iron molybdenum cofactor of nitrogenase

namespace: biological_process

def:

is_a : synonym:bioynthesis of FeMoco of nitrogenase

PMID:17521738, PMID:17203313,PMID:16893897

[GOC:MENGO_TT]

GO:XXXXXX146 :Pyruvate fermentation to Hydrogen

namespace: biological_process

def:

is_a : [GOC:MENGO_TT]


GO:XXXXXX146 :Pyruvate fermentation to Hydrogen

namespace: biological_process

def:

is_a : synonym: Dark fermentation

[GOC:MENGO_TT]


GO:XXXXXX146 :Regulation of Pyruvate fermentation to Hydrogen

namespace: biological_process

def:

is_a : synonym: Dark fermentation [GOC:MENGO_TT]


GO:XXXXXX146 :Positive regulation of Pyruvate fermentation to Hydrogen

namespace: biological_process

def:

is_a : synonym: Dark fermentation [GOC:MENGO_TT]


GO:XXXXXX146: Negative regulation of Pyruvate fermentation to Hydrogen

namespace: biological_process

def:

is_a : synonym: Dark fermentation [GOC:MENGO_TT]




GO:XXXXXX146: Glycerol fermentation to Hydrogen

namespace: biological_process

def:

is_a : synonym:

[GOC:MENGO_TT]


GO:XXXXXX146 :Regulation of Glycerol fermentation to Hydrogen

namespace: biological_process

def:

is_a : synonym: [GOC:MENGO_TT]


GO:XXXXXX146 :Positive regulation of Glycerol fermentation to Hydrogen

namespace: biological_process

def:

is_a : synonym: [GOC:MENGO_TT]


GO:XXXXXX146: Negative regulation of Glycerol fermentation to Hydrogen

namespace: biological_process

def:

is_a : synonym: Dark fermentation [GOC:MENGO_TT]



GO:XXXXXX147 :Pyruvate fermentation to Hydrogen via acetyl Co-A

namespace: biological_process

def:

is_a :

[GOC:MENGO_TT]



GO:XXXXXX147 :Pyruvate fermentation to Hydrogen via acetoacetyl Co-A

namespace: biological_process

def:

is_a :

[GOC:MENGO_TT]


GO:XXXXXX147 :Pyruvate fermentation to Hydrogen via Butyryl CoA

namespace: biological_process

def:

is_a :

[GOC:MENGO_TT]


GO:XXXXXX147 :Hydrogen biosynthesis from formate

namespace: biological_process

def:

is_a :

[GOC:MENGO_TT]


GO:XXXXXX147 :biosynthesis of formate dehydrogenase complex

namespace: biological_process

def:

is_a : synonyms:biosynthesis of formate-hydrogenlyase complex, biosynthesis of FHL complex, biosynthesis of formate hydrogen lyase complex

PMID:1779767 [GOC:MENGO_TT]


GO:XXXXXX147 :regulation of formate dehydrogenase complex biosynthesis

namespace: biological_process

def:

is_a : synonyms:regulation of formate-hydrogenlyase complex biosynthesis, regulation of FHL complex biosynthesis, regulation of formate hydrogen lyase complex biosynthesis

PMID:1779767 [GOC:MENGO_TT]


GO:XXXXXX147 :positive regulation of formate dehydrogenase complex biosynthesis

namespace: biological_process

def:

is_a : synonyms:positive regulation of formate-hydrogenlyase complex biosynthesis, positive regulation of FHL complex biosynthesis, positive regulation of formate hydrogen lyase complex biosynthesis

PMID:1779767 [GOC:MENGO_TT]


GO:XXXXXX147 :negative regulation of formate dehydrogenase complex biosynthesis

namespace: biological_process

def:

is_a : synonyms:negative regulation of formate-hydrogenlyase complex biosynthesis, negative regulation of FHL complex biosynthesis, negative regulation of formate hydrogen lyase complex biosynthesis

PMID:1779767 [GOC:MENGO_TT]


GO:XXXXXX147 :Hydrogen biosynthesis from carbon monoxide

namespace: biological_process

def:

is_a : synonyms: Hydrogen biosynthesis from CO PMID:1779767 [GOC:MENGO_TT]


GO:XXXXXX147 :Hydrogen biosynthesis from plastoquinone

namespace: biological_process

def:

is_a : synonyms: Hydrogen biosynthesis from CO PMID:1779767 [GOC:MENGO_TT]



GO:XXXXXX147 :Fe-S cluster biosynthesis

namespace: biological_process

def:

is_a : PMID:21393052, PMID:20812788 [GOC:MENGO_TT]



GO:XXXXXX147: Regulation of Fe-S cluster biosynthesis

namespace: biological_process

def:

is_a : PMID:21393052, PMID:20812788 , PMID:18322036

[GOC:MENGO_TT]


GO:XXXXXX147:positive regulation of Fe-S cluster biosynthesis

namespace: biological_process

def:

is_a : PMID:21393052, PMID:20812788 , PMID:18322036

[GOC:MENGO_TT]


GO:XXXXXX147:negative regulation of Fe-S cluster biosynthesis

namespace: biological_process

def:

is_a : PMID:21393052, PMID:20812788 , PMID:18322036

[GOC:MENGO_TT]


GO:XXXXXX147 :Fe-S cluster biosynthesis via iron sulfur cluster pathway

namespace: biological_process

def:

is_a : Synonym: Fe-S cluster biosynthesis via ISC- encoded pathway Iron, Sulfur biosynthesis via ISC- encoded pathway Iron, sulfur biosynthesis via iron sulfur cluster pathway PMID:21393052, PMID:19675643

[GOC:MENGO_TT]


GO:XXXXXX147 :Fe-S cluster biosynthesis via sulfur formation pathway

namespace: biological_process

def:

is_a : Synonym: Fe-S cluster biosynthesis via SUF- pathway Iron, Sulfur biosynthesis via sulfur formation pathway Iron, sulfur biosynthesis via SUF pathway PMID:21393052, PMID:19675643

[GOC:MENGO_TT]



GO:XXXXXX14: biosynthesis of H cluster

namespace: biological_process

def: The reactions that go into the formation of teh H-cluster complex, catalytic cofactor comprised of two iron-based clusters connected via a cysteinyl sulfur atom

is_a : Synonym: PMID:21673792 [GOC:MENGO_TT]



CELLULAR COMPONENT

GO:XXXXXX148 :Ni-Fe Hydrogenase complex

namespace: Cellular component

def:

is_a :

[GOC:MENGO_TT]


GO:XXXXXX148 :Fe-Fe Hydrogenase complex

namespace: cellular component

def:

is_a :

[GOC:MENGO_TT]


GO:0009326: formate dehydrogenase complex

namespace: cellular component

def:An enzyme complex that catalyzes the dehydrogenation of formate to produce carbon dioxide (CO2)

is_a : GO:0043234 protein complex

comment: needs synonyms synonyms: formate-hydrogenlyase complex, FHL complex, formate hydrogen lyase complex

PMID:1779767

[GOC:MENGO_TT]


GO:XXXXXX14:H cluster complex

namespace: biological_process

def: A catalytic cofactor comprised of two iron-based clusters connected via a cysteinyl sulfur atom

is_a : Synonym: PMID:21673792 [GOC:MENGO_TT]


GO:0009326: heterocyst

namespace: cellular component

def:A differentiated cell that carries out nitrogen fixation, often found in cyanobacteria

is_a : GO:0043234 protein complex

PMID:16390435

[GOC:MENGO_TT]