Manager 19Sept2012

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Agenda

Action follow-ups from last meeting

GO helpdesk JIRA set-up

All done?

Quarterly report

Action: PIs to come up with a mechanism to generate and follow-up quarterly aims

Action: Mike and the PIs will discuss this.

Discussion items

GPAD format specification

(From Rachael) The documentation (http://wiki.geneontology.org/index.php/Gene_Product_Association_Data_%28GPAD%29_Format#File_Body_2) says that the qualifier column is optional, but I seem to remember that the idea was to have an explicit relation in this column for all annotations - Jane asked a similar question in the 15th August Manager's call that I'd again like to bring up; do we want to fully specify this column, retrofitting relationships for all terms? I'm not sure this was answered on the call.

Should the qualifier column in GPAD format be required?