Manager 20Oct10: Difference between revisions
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== | ==Present:== | ||
==Discussion topics== | |||
==Annotation== | |||
*Updating annotation documentation | |||
===Evidence Proposal=== | |||
http://gocwiki.geneontology.org/index.php/Chain_of_Evidence | |||
*ECO proposal: | *ECO proposal: | ||
Line 11: | Line 18: | ||
*Evidence summation: | *Evidence summation: | ||
**I started a wiki page with some notes. Again, not sure where it fits in terms of priority. Seems like ECO needs to be in place first. Can we form a WG and start discussing this regularly? | **I started a wiki page with some notes. Again, not sure where it fits in terms of priority. Seems like ECO needs to be in place first. Can we form a WG and start discussing this regularly? | ||
==Ref Genome== | |||
==Ontology Development== | |||
*Ruth emailed to request some ontology development meetings - Judy will forward email | |||
*GOCHE completion - in time for grant? Paper probably be finished in time for renewal in Jan 2011, implementation some time later. | |||
*BP x BP cross-products implemented | |||
==Software== | |||
*AmiGO 1.8 out soon | |||
*OBO-Edit 2.1 - addresses outstanding bugs. There will be another maintenance release - 2.2 - before freeze. | |||
*Have money for 3 one-year positions - Berkeley position filled, two still available at Stanford.==Agenda== |
Revision as of 09:14, 20 October 2010
Present:
Discussion topics
Annotation
- Updating annotation documentation
Evidence Proposal
http://gocwiki.geneontology.org/index.php/Chain_of_Evidence
- ECO proposal:
- Pascale mentioned that other curators were interested in knowing about the new ECO proposal. Can we post the proposal (and all the comments so far) on the biocurators mailing list?
- there were some email exchanges about the proposal. What next? Should we form a WG, have conf.calls regularly and come to agreement? By when do we want to move to this system?
- Protein binding:
- At the GOC meeting we agreed to explore the possibility of incorporating interaction data from bioGRID/Intact/IMAX. In terms of priority, where does this fit? Should we form a working group?
- Evidence summation:
- I started a wiki page with some notes. Again, not sure where it fits in terms of priority. Seems like ECO needs to be in place first. Can we form a WG and start discussing this regularly?
Ref Genome
Ontology Development
- Ruth emailed to request some ontology development meetings - Judy will forward email
- GOCHE completion - in time for grant? Paper probably be finished in time for renewal in Jan 2011, implementation some time later.
- BP x BP cross-products implemented
Software
- AmiGO 1.8 out soon
- OBO-Edit 2.1 - addresses outstanding bugs. There will be another maintenance release - 2.2 - before freeze.
- Have money for 3 one-year positions - Berkeley position filled, two still available at Stanford.==Agenda==