Manager Call 2018-11-07

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Revision as of 10:49, 7 November 2018 by Pascale (talk | contribs)
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Meeting URL

Agenda

Montreal GOC Meeting Action Items and priorities

Reminder: SAB recommendations - high level priorities

  • Major uses of GO
    • mRNA expression analysis
    • Proteomics data analysis
    • Genetic data analysis
    • DNA methylation analysis
    • Other: (~50%) primarily comp biol and biomed informatics
  • Keep doing: ontology + annotations = model of biology, broad accessibility to all
  • And get even better: more expressive annotations, more QA and review, more collaboration, more APIs and better response times

SAB recommendations:

  • increase focus on QA
  • Leverage authors of curated papers (~150K papers have been used, link from PubMed to GO for annotated papers) ----review (and curate new)
  • Review of older annotations, highly annotated genes
  • Develop GO-CAM use cases, promote in tool developer community
  • Empower developer community (push use of recent GO annotations/ontology in tools, developer guide, website guide, APIs, build an R package to update GO annotations)

Big picture/projects

What are our main priorities? What is the strategy to achieve them?


  • Data release pipeline: Pascale/Seth
  • GO rules (includes QC): Pascale/Eric
  • GO website migration: Suzi L/Laurent-Philippe
  • Noctua: Kimberly/Seth
  • GO-CAM integration with other pathway resources: Paul/Ben
  • QC: ->
  • Annotation: no specific project

External

  • CHEBI
  • Complete proteomes
  • Contributing groups

Action items

https://docs.google.com/document/d/13BIc-zYaxIkIfK21Jhfk74pNq2jvtjepFdSGd6twpdw/edit#