Manager Call 2020-02-26: Difference between revisions
Jump to navigation
Jump to search
m (→Noctua/NEO) |
|||
Line 43: | Line 43: | ||
David | David | ||
https://academic.oup.com/bioinformatics/advance-article/doi/10.1093/bioinformatics/btaa106/5739437 | https://academic.oup.com/bioinformatics/advance-article/doi/10.1093/bioinformatics/btaa106/5739437 | ||
LPA was one of the reviewer | |||
===Non-GO editors people making PR in the ontology tracker=== | ===Non-GO editors people making PR in the ontology tracker=== |
Revision as of 12:19, 26 February 2020
Agenda
- Agenda: Pascale
- Minutes: Laurent-Philippe
- Present:
- Regrets:
Discussion points
Caltech f2f, 24-28 Feb
Update /questions ?
GO meeting Paris, 11 (Users), 12-14 (Main), 15(SAB) May
GO meeting Baltimore, week of 5th Oct
Discussion
Noctua/NEO
- Loading UniProt Viral + bacterial GPI: This came up again from the multi-organism working group. They want to start making GO-CAM models. Can the loading of the GPI file be prioritized and assigned?
Ontology - questions for managers/PIs
- Comments: what type of comments should we show users:
- Editors’ comment: with links to the GH ticket
- Term contributor + special projects: GOC:curators; GOC:pg GOC:add,
as well as GO_REF:0000022, GOC:mtg_15nov05, etc.
Notes:
- example of "vw" uninformative for users. Could link to ORCIDs and use the "nickname" from users.yaml for a more informative display
- the source and user should not ben under "definition", create another section ?
- whenever there is a reference (eg GOC_mtg_sensu), there should be a GO_REF to further describe it
- 'Activity' in MF terms
- Proposal is to keep only 'activity only under 'catalytic activity - ok ?
Paper identifying missing 'is_a' relations
David https://academic.oup.com/bioinformatics/advance-article/doi/10.1093/bioinformatics/btaa106/5739437 LPA was one of the reviewer
Non-GO editors people making PR in the ontology tracker
https://github.com/geneontology/go-ontology/issues/17091
Isn't our policy that *only* GO editors work on the ontology ? Or do we want to allow some other users to make PRs?