Difference between revisions of "Manager Call 2020-06-17"

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===Isoforms NOT in AmiGO/products===
==Isoforms NOT in AmiGO/products==
https://github.com/geneontology/go-site/issues/1105
https://github.com/geneontology/go-site/issues/1105
Should they not be ?  
Should they not be ?  
==Bader gene sets==
Approach to handle gene sets redundancy.
They are deriving gene sets for GO, but are using EBI and MGI for human and mouse annotations: http://baderlab.org/GeneSets#Sources.
Proposals:
1) contact them to explain the benefits of fetching annotations from GOC instead of EBI/MGI instead of GOC
2) page on the go site to explain the above (differences & benefits from fetching annotations from GOC rather than a source; eg check, validations, etc)
3) some of Bader gene sets could be of interest for QC ?


[[Category: GO Managers Meetings]]
[[Category: GO Managers Meetings]]

Revision as of 17:19, 14 June 2020

Agenda

  • Agenda: Laurent-Philippe
  • Minutes: David
  • Present:
  • Regrets:


Isoforms NOT in AmiGO/products

https://github.com/geneontology/go-site/issues/1105 Should they not be ?

Bader gene sets

Approach to handle gene sets redundancy.

They are deriving gene sets for GO, but are using EBI and MGI for human and mouse annotations: http://baderlab.org/GeneSets#Sources.

Proposals: 1) contact them to explain the benefits of fetching annotations from GOC instead of EBI/MGI instead of GOC 2) page on the go site to explain the above (differences & benefits from fetching annotations from GOC rather than a source; eg check, validations, etc) 3) some of Bader gene sets could be of interest for QC ?